Regulog LeuO - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	LysR
Regulation mode:	activator
Biological process:
Effector:	Guanosine 3',5'-bis(diphosphate)
Phylum:	Gammaproteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 21 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - LysR
By effector - Guanosine 3',5'-bis(diphosphate)

Statistics of regulated genes
Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895	1	1
Edwardsiella tarda EIB202	1	1
Enterobacter sp. 638	1	1
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043
Escherichia coli str. K-12 substr. MG1655	9	3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	1	1
Photorhabdus luminescens subsp. laumondii TTO1	7	2
Proteus mirabilis HI4320	1	1
Salmonella typhimurium LT2	9	2
Serratia proteamaculans 568	1	1
Yersinia pestis KIM	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
cas3	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0762: CRISPR-associated helicase	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2761: CRISPR-associated helicase	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -242 score = 4.40476 sequence = ATTATCTTTATTTAT Gene: plu0745: CRISPR-associated helicase	Proteus mirabilis HI4320	* Salmonella typhimurium LT2 Site: position = -165 score = 4.23908 sequence = ATTTATAATAATTAT Site: position = -152 score = 4.01703 sequence = ATTCGTGGGGTAAAT Gene: STM2944: CRISPR-associated helicase	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated helicase
casA	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0763: CRISPR-associated protein CasA	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -268 score = 4.90355 sequence = ATTCATGGTAATTAT Site: position = -298 score = 4.34383 sequence = ATTCACAGTATGAAT Gene: b2760: CRISPR-associated protein CasA	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0746: CRISPR-associated protein CasA	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2943: CRISPR-associated protein CasA	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein CasA
casB	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0764: CRISPR-associated protein CasB	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2759: CRISPR-associated protein CasB	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0747: CRISPR-associated protein CasB	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2942: CRISPR-associated protein CasB	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein CasB
casC	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0765: CRISPR-associated protein CasC	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2758: CRISPR-associated protein CasC	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0748: CRISPR-associated protein CasC	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2941: CRISPR-associated protein CasC	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein CasC
casD	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0766: CRISPR-associated protein CasD	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2757: CRISPR-associated protein CasD	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0749: CRISPR-associated protein CasD	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2940: CRISPR-associated protein CasD	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein CasD
casE	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0767: CRISPR-associated protein CasE	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2756: CRISPR-associated protein CasE	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0750: CRISPR-associated protein CasE	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2939: CRISPR-associated protein CasE	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein CasE
ygbT	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0768: CRISPR-associated protein	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2755: CRISPR-associated protein	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2938: CRISPR-associated protein	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein
ygbF	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0769: CRISPR-associated protein	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2754: CRISPR-associated protein	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2937: CRISPR-associated protein	Serratia proteamaculans 568	Yersinia pestis KIM	CRISPR-associated protein

CRON 2.
leuO	* Citrobacter koseri ATCC BAA-895 Site: position = -241 score = 3.49606 sequence = ATTCGCCACGCTTAT Gene: CKO_03302: Dual transcriptional regulator LeuO, LysR family	* Edwardsiella tarda EIB202 Site: position = -246 score = 4.67656 sequence = ATTGCCCTTAATTAT Gene: ETAE_0623: Dual transcriptional regulator LeuO, LysR family	* Enterobacter sp. 638 Site: position = -229 score = 4.58114 sequence = ATTCATTGGATTTAT Gene: Ent638_0623: Dual transcriptional regulator LeuO, LysR family	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -325 score = 4.10601 sequence = ATTAATGTTAAGAAT Site: position = -243 score = 4.85675 sequence = ATTCGCGGTAGTTAT Gene: b0076: Dual transcriptional regulator LeuO, LysR family	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -291 score = 4.16633 sequence = ATTTTTATGGATTAT Gene: KPN_00081: Dual transcriptional regulator LeuO, LysR family	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -223 score = 4.19816 sequence = ATTGGAATTATATAT Site: position = -112 score = 4.68504 sequence = ATTGATCTCGTTAAT Gene: plu3672: Dual transcriptional regulator LeuO, LysR family	* Proteus mirabilis HI4320 Site: position = -289 score = 3.77837 sequence = ATTTTGTTTTATTAT Gene: PMI2082: Dual transcriptional regulator LeuO, LysR family	* Salmonella typhimurium LT2 Site: position = -240 score = 4.4008 sequence = ATTCGCCATAGTTAT Site: position = -263 score = 3.87716 sequence = ATTCACTTGGTGTAT Gene: STM0115: Dual transcriptional regulator LeuO, LysR family	* Serratia proteamaculans 568 Site: position = -400 score = 3.55134 sequence = ATTCTTGATATCAAT Gene: Spro_0746: Dual transcriptional regulator LeuO, LysR family	* Yersinia pestis KIM Site: position = -210 score = 5.04299 sequence = ATTGGCGTTATTAAT Site: position = -413 score = 4.22773 sequence = ATTATTGGTGATTAT Gene: y3642: Dual transcriptional regulator LeuO, LysR family	Dual transcriptional regulator LeuO, LysR family

CRON 3.
rhsD	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -291 score = 4.43314 sequence = ATTGATTTTAAATAT Site: position = -323 score = 4.18873 sequence = ATTGCTGATATTAAT Gene: b0497: component of rhs element	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	component of rhs element

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog LeuO - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --