Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GalR/GalS regulog to Edwardsiella ictaluri 93-146

Reference regulog properties
Source regulog: GalR/GalS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Galactose utilization
Effector: Galactose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella ictaluri 93-146
Orthologous TF(s) NT01EI_3268
Regulated genes 3
Built upon 78 sites [see more]
Predicted regulatory interactions in Edwardsiella ictaluri 93-146
Locus tag Position Score Sequence
Position: -41
Score: 5.2
Sequence: TGGTGTAAACGTTTACGGTT
Locus tag: NT01EI_3268
NT01EI_3268 -41 5.2 TGGTGTAAACGTTTACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: galactose operon repressor galR
Escherichia coli str. K-12 substr. MG1655 b2837 -32 5.2 GAATGTAAGCGTTTACCCAC
Salmonella typhimurium LT2 STM3011 -33 5.3 TAATGTAAGCGTTTACCCAC
Citrobacter koseri ATCC BAA-895 CKO_04211 -33 5.1 AAATGTAAGCGTTTACCCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03246 -33 5.5 GTATGTAAACGCTTACCCTA
Enterobacter sp. 638 Ent638_3278 -35 5.3 GTGTGTAAACGCTTACCCCC
Erwinia amylovora ATCC 49946 EAM_2770 -35 4.9 AAATGTAAACGCTTACCCAG
Yersinia pestis KIM y3183 32 5.4 TGATGTAAGCGGTTACCCTA
Serratia proteamaculans 568 Spro_3832 -34 5.2 GAATGTAAGCGATTACCCAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3172 -240 5.3 AAGTGTAATCGGTTACCCTA
Edwardsiella tarda EIB202 ETAE_2890 -41 5.2 TGGTGTAAACGTTTACGGTT
Position: -79
Score: 6.1
Sequence: GAATGTAAACGATTACATTT
Locus tag: NT01EI_3377
NT01EI_3377 -79 6.1 GAATGTAAACGATTACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: galactose transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -282 5 AACTGAAACCGATTACACCA
-100 6.2 TAGTGTAAGCGATTACACTG
Salmonella typhimurium LT2 STM3091 -283 4.7 TCATGAAAGCGGTTACATTC
-101 6.1 CAGTGTAAACGATTACACCA
Citrobacter koseri ATCC BAA-895 CKO_04318 -282 5.2 TAATGAAACCGTTTACCCTC
-101 6.6 TAGTGTAAACGATTACACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -285 4.7 AAATGAAAGCGATTACATAG
-102 5.6 TTGTGGAAACGATTACACAG
Enterobacter sp. 638 Ent638_3347 -284 5 AAATGAAAGCGATTACACCA
-102 6.3 TAGTGTAACCGATTACACCA
Erwinia amylovora ATCC 49946 EAM_2827 -170 5.6 TGTTGTAACCGGTTACATTC
Serratia proteamaculans 568 Spro_1160 -274 4.3 GTGTGATATCGGTTACATTT
-100 6.1 TTGTGTAATCGTTTCCACTA
Edwardsiella tarda EIB202 ETAE_2966 -273 5.6 AAGTGAAAACGATTACATTT
-79 6 GTATGTAAACGATTACATTT
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