Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GlpR regulog to Edwardsiella ictaluri 93-146

Reference regulog properties
Source regulog: GlpR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: DeoR
Regulation mode: repressor
Biological process: Glycerol utilization
Effector: Glycerol 3-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Edwardsiella ictaluri 93-146
Orthologous TF(s) NT01EI_3680
Regulated genes 3
Built upon 64 sites [see more]
Predicted regulatory interactions in Edwardsiella ictaluri 93-146
Locus tag Position Score Sequence
Position: -152
Score: 4.6
Sequence: CGCTCGAAAATGAAAA
Locus tag: NT01EI_3468
NT01EI_3468 -152 4.6 CGCTCGAAAATGAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -218 3.9 TGTTTGATTTCGCGCA
-166 3.7 TGCGTCATTTTGAACA
Salmonella typhimurium LT2 STM2283 -219 3.9 TGTTTGATTTCGCGCA
Citrobacter koseri ATCC BAA-895 CKO_00537 -210 4.2 CGCGCATAATCGCTCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -217 4.3 TGTTTGATTTCGAGCA
Enterobacter sp. 638 Ent638_2804 -200 4.6 TGTTTGATTTCGAACA
Erwinia amylovora ATCC 49946 EAM_0195 -100 4.3 TGTGCGCAATGGAACA
Serratia proteamaculans 568 Spro_0199 -108 4.8 CGCTCGTTATGGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -52 4.5 CGTTCGTAATAGAACA
Edwardsiella tarda EIB202 ETAE_3116 -153 4.6 CGCTCGAAAATGAAAA
Proteus mirabilis HI4320 PMI3591 -92 4.5 CGTTCGTTAAAGAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -109 4.3 TTTTCGTTATGGAAAA
Position: -47
Score: 5.3
Sequence: TGCTCGAAATCGAACA
Locus tag: NT01EI_3679
NT01EI_3679 -47 5.3 TGCTCGAAATCGAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: aerobic glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -50 5.3 TGTTCGATAACGAACA
Salmonella typhimurium LT2 STM3526 -50 5.3 TGTTCGATAACGAACA
Citrobacter koseri ATCC BAA-895 CKO_04845 -50 5.4 TGCTCGATAACGAACA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -53 4.8 TGAGCGATATCGAGCA
Enterobacter sp. 638 Ent638_3835 -50 5 TGAGCGATATCGAACA
Erwinia amylovora ATCC 49946 EAM_3265 -49 5.3 TGCTCGAAAACGAACA
Yersinia pestis KIM y3891 -52 5 TGAGCGAAAACGAACA
Serratia proteamaculans 568 Spro_4642 -52 5 TGAGCGAAAACGAACA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -47 5.3 TGCTCGAAAACGAACA
Edwardsiella tarda EIB202 ETAE_3312 -47 5.3 TGCTCGAAAACGAACA
Proteus mirabilis HI4320 PMI2930 -52 5 TGAGCGAAAACGAACA
Photorhabdus luminescens subsp. laumondii TTO1 plu0194 -50 4.7 TGAGCGAAAACGAGCA
Position: -92
Score: 5
Sequence: CGCTCGTTAACGATAA
Locus tag: NT01EI_3793
NT01EI_3793 -92 5 CGCTCGTTAACGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator protein
Yersinia pestis KIM y0046 -155 4.1 TACGCGAAAACGCTCA
-93 5 CGCTCGTTAACGATAA
Serratia proteamaculans 568 Spro_4797 -137 5.1 TGTTCGTTAACGATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4266 -107 4.7 CGCTCATTAACGATAA
Edwardsiella tarda EIB202 ETAE_3441 -93 5 CGCTCGTTAACGATAA
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