Regulons of Desulfohalobium retbaense DSM 5692

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArsR	Arsenate	Arsenic resistance	3	4
TF	CooA		Carbon monoxide utilization	1	1
TF	DVU0030		Amino acid transport	2	2
TF	DVU0309			2	2
TF	DVU0539/DVU0946			4	9
TF	DVU0569		Amino acid metabolism	1	1
TF	DVU1063		Motility	4	1
TF	DVU1419			1	1
TF	DVU2106		Nitrogen fixation	2	1
TF	DVU2114			4	1
TF	DVU2394		Energy metabolism	3	2
TF	DVU2423		Nitrogen metabolism	4	1
TF	DVU2802			1	1
TF	DVU2894		Motility	2	1
TF	DVU2934			1	2
TF	DVU3023	Lactate	Lactate utilization	1	3
TF	DVU3305			2	2
TF	Desal_2066			3	2
TF	FliA		Motility	4	3
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	6	1
TF	HcpR	Nitric oxide	Nitrosative stress response	5	3
TF	HmcR		Energy metabolism	1	2
TF	HrcA	Heat shock	Heat shock response	2	1
TF	HrsM			2	1
TF	LldR	L-lactate	Lactate utilization	2	1
TF	ModE2	Molybdenum	Molybdopterin biosynthesis; Molybdenum homeostasis	7	3
TF	NifA-1		Nitrogen assimilation	8	9
TF	OhcR		Energy metabolism	2	2
TF	PerR		Peroxide stress response	6	3
TF	PhoB	Inorganic phosphate	Phosphate metabolism	10	5
TF	Rex	NADH	Energy metabolism	16	12
TF	RpoH	Heat shock	Heat shock response	5	2
TF	RpoN		Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism	35	16
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	3	2
TF	SmtB		Heavy metal resistance	1	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	2	1
RNA	GEMM_RNA_motif	Cyclic diguanylate	Second messenger response	3	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --