Regulon of NifA-1 in Desulfohalobium retbaense DSM 5692

Properties
Regulator type:	Transcription factor
TF locus tag:	Dret_0831
Regulator family:	Fis
Regulation mode:
Biological process:	Nitrogen assimilation
Effector:
Regulog:	NifA-1 - Desulfovibrionales
Statistics of regulated genes:
- Genes	7
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -173 Score: 3.9 Sequence: GTAACAAATTTGTCCA Position: -132 Score: 4.2 Sequence: ATGCCATTTTTGACAA Locus tag: Dret_2267 Name: amtB Funciton: Ammonium transporter Locus tag: Dret_2268 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Dret_2269 Name: glnD Funciton: UTP-GlnB uridylyltransferase, GlnD
	Dret_2267	amtB	Ammonium transporter
	Dret_2268	glnB	Nitrogen regulatory protein P-II
	Dret_2269	glnD	UTP-GlnB uridylyltransferase, GlnD
Position: -182 Score: 4.5 Sequence: TTTTCGTTTTTGTCAA Position: -173 Score: 3.9 Sequence: TTGTCAATATTGGATC Position: -141 Score: 5 Sequence: TTGACAAAAATGAAAA Locus tag: Dret_2389 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Dret_2389	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -393 Score: 3.9 Sequence: GTTTCAGAAATGGAAG Position: -270 Score: 4.5 Sequence: ATTCCATTTTTGTAAC Position: -151 Score: 5 Sequence: TTTTCAATTTTGTCAA Locus tag: Dret_0113 Name: amtB2 Funciton: Ammonium transporter Locus tag: Dret_0112 Name: glnB2 Funciton: Nitrogen regulatory protein P-II
	Dret_0113	amtB2	Ammonium transporter
	Dret_0112	glnB2	Nitrogen regulatory protein P-II
Position: -87 Score: 4.6 Sequence: TTTACATTTTCGTAAC Locus tag: Dret_0402 Name: DVU0671 Funciton: Ferredoxin-dependent glutamate synthase
	Dret_0402	DVU0671	Ferredoxin-dependent glutamate synthase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD