Regulon of DVU0539/DVU0946 in Desulfohalobium retbaense DSM 5692

Properties
Regulator type:	Transcription factor
TF locus tag:	Dret_1222, Dret_0970
Regulator family:	Fis
Regulation mode:
Biological process:
Effector:
Regulog:	DVU0539/DVU0946 - Desulfovibrionales
Statistics of regulated genes:
- Genes	8
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 30 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis

Regulated operons
	Locus Tag	Name	Function
Position: -401 Score: 4.5 Sequence: TGCTAAGCGCGATTGGCA Position: -292 Score: 4.7 Sequence: TGCAATCCCGGCTTAGCA Position: -268 Score: 5.2 Sequence: TGCCAACCGCGGTTGGCA Position: -32 Score: 4.4 Sequence: AGCAAAGACACGTATGCA Locus tag: Dret_1220 Name: DVU0943 Funciton: Uncharacterized membrane protein family UPF0324 Locus tag: Dret_1219 Name: DVU0944 Funciton: hypothetical protein
	Dret_1220	DVU0943	Uncharacterized membrane protein family UPF0324
	Dret_1219	DVU0944	hypothetical protein
Position: -78 Score: 5.2 Sequence: TGCCAACTCGCGTTTACA Locus tag: Dret_0969 Name: DVU0540 Funciton: integral membrane sensor signal transduction histidine kinase Locus tag: Dret_0970 Name: DVU0539 Funciton: two component, sigma54 specific, transcriptional regulator, Fis family
	Dret_0969	DVU0540	integral membrane sensor signal transduction histidine kinase
	Dret_0970	DVU0539	two component, sigma54 specific, transcriptional regulator, Fis family
Position: -484 Score: 5.2 Sequence: TGCCAACCGCGGTTGGCA Position: -460 Score: 4.7 Sequence: TGCTAAGCCGGGATTGCA Position: -351 Score: 4.3 Sequence: TGCCAATCGCGCTTAGCA Locus tag: Dret_1221 Name: DVU0540 Funciton: integral membrane sensor signal transduction histidine kinase Locus tag: Dret_1222 Name: DVU0539 Funciton: two component, sigma54 specific, transcriptional regulator, Fis family
	Dret_1221	DVU0540	integral membrane sensor signal transduction histidine kinase
	Dret_1222	DVU0539	two component, sigma54 specific, transcriptional regulator, Fis family
Position: -399 Score: 5 Sequence: TGTAAACGCGAGTTGGCA Locus tag: Dret_0967 Name: null Funciton: hypothetical protein Locus tag: Dret_0966 Name: DVU0943 Funciton: Uncharacterized membrane protein family UPF0324
	Dret_0967		hypothetical protein
	Dret_0966	DVU0943	Uncharacterized membrane protein family UPF0324

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD