Regulon of DVU0539/DVU0946 in Desulfohalobium retbaense DSM 5692
| Regulator type: | Transcription factor |
| TF locus tag: | Dret_1222, Dret_0970 |
| Regulator family: | Fis |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Regulog: | DVU0539/DVU0946 - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Fis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -401
Score: 4.5 Sequence: TGCTAAGCGCGATTGGCA
Position: -292
Score: 4.7 Sequence: TGCAATCCCGGCTTAGCA
Position: -268
Score: 5.2 Sequence: TGCCAACCGCGGTTGGCA
Position: -32
Score: 4.4 Sequence: AGCAAAGACACGTATGCA
Locus tag: Dret_1220
Name: DVU0943 Funciton: Uncharacterized membrane protein family UPF0324
Locus tag: Dret_1219
Name: DVU0944 Funciton: hypothetical protein |
|||
|
DVU0943
|
Uncharacterized membrane protein family UPF0324
|
||
|
DVU0944
|
hypothetical protein
|
||
|
Position: -78
Score: 5.2 Sequence: TGCCAACTCGCGTTTACA
Locus tag: Dret_0969
Name: DVU0540 Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: Dret_0970
Name: DVU0539 Funciton: two component, sigma54 specific, transcriptional regulator, Fis family |
|||
|
DVU0540
|
integral membrane sensor signal transduction histidine kinase
|
||
|
DVU0539
|
two component, sigma54 specific, transcriptional regulator, Fis family
|
||
|
Position: -484
Score: 5.2 Sequence: TGCCAACCGCGGTTGGCA
Position: -460
Score: 4.7 Sequence: TGCTAAGCCGGGATTGCA
Position: -351
Score: 4.3 Sequence: TGCCAATCGCGCTTAGCA
Locus tag: Dret_1221
Name: DVU0540 Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: Dret_1222
Name: DVU0539 Funciton: two component, sigma54 specific, transcriptional regulator, Fis family |
|||
|
DVU0540
|
integral membrane sensor signal transduction histidine kinase
|
||
|
DVU0539
|
two component, sigma54 specific, transcriptional regulator, Fis family
|
||
|
Position: -399
Score: 5 Sequence: TGTAAACGCGAGTTGGCA
Locus tag: Dret_0967
Name: null Funciton: hypothetical protein
Locus tag: Dret_0966
Name: DVU0943 Funciton: Uncharacterized membrane protein family UPF0324 |
|||
|
hypothetical protein
|
|||
|
DVU0943
|
Uncharacterized membrane protein family UPF0324
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |