Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of DVU0539/DVU0946 in Desulfohalobium retbaense DSM 5692

Properties
Regulator type: Transcription factor
TF locus tag: Dret_1222, Dret_0970
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Regulog: DVU0539/DVU0946 - Desulfovibrionales
Statistics of regulated genes:
- Genes 8
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 30 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -401
Score: 4.5
Sequence: TGCTAAGCGCGATTGGCA
Position: -292
Score: 4.7
Sequence: TGCAATCCCGGCTTAGCA
Position: -268
Score: 5.2
Sequence: TGCCAACCGCGGTTGGCA
Position: -32
Score: 4.4
Sequence: AGCAAAGACACGTATGCA
Locus tag: Dret_1220
Name: DVU0943
Funciton: Uncharacterized membrane protein family UPF0324
Locus tag: Dret_1219
Name: DVU0944
Funciton: hypothetical protein
DVU0943
Uncharacterized membrane protein family UPF0324
DVU0944
hypothetical protein

Position: -78
Score: 5.2
Sequence: TGCCAACTCGCGTTTACA
Locus tag: Dret_0969
Name: DVU0540
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: Dret_0970
Name: DVU0539
Funciton: two component, sigma54 specific, transcriptional regulator, Fis family
DVU0540
integral membrane sensor signal transduction histidine kinase
DVU0539
two component, sigma54 specific, transcriptional regulator, Fis family

Position: -484
Score: 5.2
Sequence: TGCCAACCGCGGTTGGCA
Position: -460
Score: 4.7
Sequence: TGCTAAGCCGGGATTGCA
Position: -351
Score: 4.3
Sequence: TGCCAATCGCGCTTAGCA
Locus tag: Dret_1221
Name: DVU0540
Funciton: integral membrane sensor signal transduction histidine kinase
Locus tag: Dret_1222
Name: DVU0539
Funciton: two component, sigma54 specific, transcriptional regulator, Fis family
DVU0540
integral membrane sensor signal transduction histidine kinase
DVU0539
two component, sigma54 specific, transcriptional regulator, Fis family

Position: -399
Score: 5
Sequence: TGTAAACGCGAGTTGGCA
Locus tag: Dret_0967
Name: null
Funciton: hypothetical protein
Locus tag: Dret_0966
Name: DVU0943
Funciton: Uncharacterized membrane protein family UPF0324
hypothetical protein
DVU0943
Uncharacterized membrane protein family UPF0324
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD