Regulons of Azorhizobium caulinodans ORS 571

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BioR		Biotin biosynthesis	3	2
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	FixJ	Oxygen	Oxidative stress response	2	4
TF	FnrN/FixK/AadR	Oxygen	Oxidative stress response; Nitrogen fixation	15	6
TF	GulR		Glucarate utilization; Galactarate utilization	3	2
TF	HrcA	Heat shock	Heat shock response	2	2
TF	IdnR	L-idonate	Idonate utilization	2	2
TF	Irr	Heme	Iron homeostasis	22	10
TF	KglR		Sugar utilization	1	1
TF	LexA	DNA damage	SOS response	20	12
TF	MdcY		Malonate metabolism	2	2
TF	ModE	Molybdate	Molybdenum homeostasis	1	1
TF	Mur	Iron ion, (Fe2+)	Manganese homeostasis	1	1
TF	NifA		Nitrogen fixation	20	20
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	8	6
TF	OapR		Amino acid metabolism	1	1
TF	PckR		Central carbohydrate metabolism	13	2
TF	PdxQ3		Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxW	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PhnF		Phosphonate utilization	5	2
TF	RL3595		Sugar utilization	2	2
TF	SMb20039			1	1
TF	SMb20667		Sugar utilization	2	4
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	3	2
TF	YrdX			1	2
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	10	2
RNA	Glycine	Glycine	Glycine metabolism	2	4
RNA	SAM_alpha	S-adenosylmethionine	Methionine biosynthesis	2	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	7	2
RNA	mini-ykkC		Multidrug resistance	2	1
RNA	serC		Serine biosynthesis	1	1
RNA	speF		Ornithine degradation	1	1
RNA	ykkC-yxkD		Multidrug resistance	2	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --