Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Azorhizobium caulinodans ORS 571

Properties
Regulator type: Transcription factor
TF locus tag: AZC_3086
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Rhizobiales
Statistics of regulated genes:
- Genes 27
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 86 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -159
Score: 4.8
Sequence: TGCTCAATTTTTAATCT
Locus tag: AZC_1511
Name: dppA
Funciton: Dipeptide ABC transporter, substrate-binding component
Locus tag: AZC_1512
Name: dppB
Funciton: Dipeptide ABC transporter, permease component 1
Locus tag: AZC_1513
Name: dppC
Funciton: Dipeptide ABC transporter, permease component 2
Locus tag: AZC_1514
Name: dppDE
Funciton: Dipeptide ABC transporter, ATP-binding component
AZC_1511
dppA
Dipeptide ABC transporter, substrate-binding component
AZC_1512
dppB
Dipeptide ABC transporter, permease component 1
AZC_1513
dppC
Dipeptide ABC transporter, permease component 2
AZC_1514
dppDE
Dipeptide ABC transporter, ATP-binding component
Position: -242
Score: 4.6
Sequence: TGCTCATTTTTTGATCT
Locus tag: AZC_0686
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: AZC_0685
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: AZC_0684
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: AZC_0683
Name: hmp
Funciton: Nitric oxide dioxygenase
Locus tag: AZC_0682
Name: nasB
Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
Locus tag: AZC_0681
Name: nirA
Funciton: Ferredoxin--nitrite reductase (EC 1.7.7.1)
Locus tag: AZC_0680
Name: nasB2
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: AZC_0679
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
AZC_0686
nrtA
Nitrate ABC transporter, substrate-binding component
AZC_0685
nrtB
Nitrate ABC transporter, permease component
AZC_0684
nrtC
Nitrate ABC transporter, ATP-binding component
AZC_0683
hmp
Nitric oxide dioxygenase
AZC_0682
nasB
Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
AZC_0681
nirA
Ferredoxin--nitrite reductase (EC 1.7.7.1)
AZC_0680
nasB2
Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
AZC_0679
nasA
Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Position: -134
Score: 4.4
Sequence: CGCATACTATTTAGGCA
Locus tag: AZC_1602
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: AZC_1601
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
AZC_1602
glnB
Nitrogen regulatory protein P-II
AZC_1601
glnA
Glutamine synthetase type I (EC 6.3.1.2)
Position: -179
Score: 4.6
Sequence: TGCCTAAATTATAGTCA
Locus tag: AZC_1758
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: AZC_1759
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: AZC_1760
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: AZC_1761
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
AZC_1758
urtA
Urea ABC transporter, substrate-binding component
AZC_1759
urtB
Urea ABC transporter, permease component 1
AZC_1760
urtC
Urea ABC transporter, permease component 2
AZC_1761
urtD
Urea ABC transporter, ATP-binding component 1
Position: -230
Score: 3.8
Sequence: TGGCTAAAATTTAGACA
Locus tag: AZC_4397
Name: uctA
Funciton: Urea carboxylase-related ABC transporter, substrate-binding component
Locus tag: AZC_4398
Name: uctB
Funciton: Urea carboxylase-related ABC transporter, permease component
Locus tag: AZC_4399
Name: uctC
Funciton: Urea carboxylase-related ABC transporter, ATP-binding component
Locus tag: AZC_4400
Name: uahC
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4401
Name: uahB
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4402
Name: uahA
Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: AZC_4403
Name: atzF2
Funciton: Allophanate hydrolase (EC 3.5.1.54)
AZC_4397
uctA
Urea carboxylase-related ABC transporter, substrate-binding component
AZC_4398
uctB
Urea carboxylase-related ABC transporter, permease component
AZC_4399
uctC
Urea carboxylase-related ABC transporter, ATP-binding component
AZC_4400
uahC
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
AZC_4401
uahB
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
AZC_4402
uahA
Urea carboxylase (EC 6.3.4.6)
AZC_4403
atzF2
Allophanate hydrolase (EC 3.5.1.54)
Position: -241
Score: 4
Sequence: CGCCTATTTTTAAGGCA
Locus tag: AZC_4227
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: AZC_4226
Name: amtB
Funciton: Ammonium transporter
AZC_4227
glnK
Nitrogen regulatory protein P-II
AZC_4226
amtB
Ammonium transporter
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