Regulon of Glycine in Azorhizobium caulinodans ORS 571
| Regulator type: | RNA regulatory element |
| Name: | Glycine |
| RFAM: | RF00504 |
| Regulation mode: | |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Regulog: | Glycine - Rhizobiales |
| Under regulation: | |
| - Genes | 12 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - Glycine
- By effector - Glycine
- By pathway - Glycine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -104
Score: 60.4 Sequence: AATGGCAGCACCGGG...
Position: -18
Score: 50.4 Sequence: CCAGAAGACGTCCGG...
Locus tag: AZC_2080
Name: dppA Funciton: putative ABC transporter (substrate-binding protein)
Locus tag: AZC_2079
Name: dppB Funciton: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
Locus tag: AZC_2078
Name: dppC Funciton: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
Locus tag: AZC_2077
Name: dppD Funciton: Dipeptide transport system ATP-binding protein DppD
Locus tag: AZC_2076
Name: RPA1213 Funciton: MlrC-like protein
Locus tag: AZC_2075
Name: abgB Funciton: Hippurate hydrolase (EC 3.5.1.32)
Locus tag: AZC_2074
Name: argE Funciton: blr5597; putative carboxypeptidase precursor (EC 3.4.17.11) |
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dppA
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putative ABC transporter (substrate-binding protein)
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dppB
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Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
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dppC
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Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
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dppD
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Dipeptide transport system ATP-binding protein DppD
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RPA1213
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MlrC-like protein
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abgB
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Hippurate hydrolase (EC 3.5.1.32)
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argE
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blr5597; putative carboxypeptidase precursor (EC 3.4.17.11)
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Position: -318
Score: 50.7 Sequence: TGATCCCTGCGGGAG...
Position: -213
Score: 32 Sequence: CTCTGGAAAGCAGTC...
Locus tag: AZC_4245
Name: gcvT Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: AZC_4246
Name: gcvH Funciton: Glycine cleavage system H protein
Locus tag: AZC_4247
Name: NGR_b19840 Funciton: OsmC/Ohr family protein
Locus tag: AZC_4248
Name: gcvP1 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
Locus tag: AZC_4249
Name: gcvP2 Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) |
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gcvT
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Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
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gcvH
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Glycine cleavage system H protein
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NGR_b19840
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OsmC/Ohr family protein
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gcvP1
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2)
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gcvP2
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Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |