Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Azorhizobium caulinodans ORS 571

Properties
Regulator type: Transcription factor
TF locus tag: AZC_2201
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Rhizobiales
Statistics of regulated genes:
- Genes 11
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 212 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -20
Score: 0.5
Sequence: GAACAAAACGGGAAC
Locus tag: AZC_3906
Name: imuA
Funciton: Predicted RecA/RadA recombinase
Locus tag: AZC_3905
Name: imuB
Funciton: DNA polymerase-like protein PA0670
Locus tag: AZC_3904
Name: dnaE2
Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
AZC_3906
imuA
Predicted RecA/RadA recombinase
AZC_3905
imuB
DNA polymerase-like protein PA0670
AZC_3904
dnaE2
DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -106
Score: 0.1
Sequence: GAACAAACAAGAAAC
Position: -80
Score: 5.3
Sequence: GTTCCTGATTTGTTT
Locus tag: AZC_2201
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
AZC_2201
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -21
Score: 5
Sequence: GTTCTATTTATGTTC
Locus tag: AZC_2887
Name: uvrA
Funciton: Excinuclease ABC subunit A
AZC_2887
uvrA
Excinuclease ABC subunit A
Position: 2
Score: 5.4
Sequence: GTTCTTGTTTCGTTC
Locus tag: AZC_0428
Name: PF04055
Funciton: Radical SAM domain protein
AZC_0428
PF04055
Radical SAM domain protein
Position: -79
Score: 1.6
Sequence: GAACATATTGCGAAC
Position: -61
Score: 1.1
Sequence: GAACAAATGAGGTAC
Locus tag: AZC_2855
Name: recA
Funciton: Recombinase A
AZC_2855
recA
Recombinase A
Position: -61
Score: 4.6
Sequence: GGTCCCCTTTTGTTC
Locus tag: AZC_3127
Name: uvrB
Funciton: Excinuclease ABC subunit B
AZC_3127
uvrB
Excinuclease ABC subunit B
Position: -265
Score: 1.1
Sequence: GAACGTAACAGGAAC
Position: -187
Score: 1.4
Sequence: GAACATAAATAGAAC
Locus tag: AZC_2886
Name: ssb
Funciton: Single-stranded DNA-binding protein
AZC_2886
ssb
Single-stranded DNA-binding protein
Position: -80
Score: 4.3
Sequence: GTTCGCAATCTGTTC
Locus tag: AZC_4342
Name: yifB
Funciton: Conserved hypothetical protein
AZC_4342
yifB
Conserved hypothetical protein
Position: -44
Score: 4.9
Sequence: GTTCGCTGTTTGTTC
Locus tag: AZC_0799
Name: rmuC
Funciton: DNA recombination protein RmuC
AZC_0799
rmuC
DNA recombination protein RmuC
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