Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Burkholderia glumae BGR1

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF BPSL1086 Metabolite transport 2 2
TF BPSL1304 Sugar utilization 1 1
TF BPSS0970 2 1
TF Bamb_4265 1 1
TF Bamb_5788 2 2
TF Bamb_6386 1 1
TF Bcep18194_B0628 1 1
TF Bphy_4590 Sugar utilization 1 2
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 1 1
TF FadP Fatty acid degradation 10 7
TF FdsR Formate Formate oxydation 2 2
TF GabR Gamma-aminobutyric acid Gamma-aminobutyrate utilization 1 1
TF GguR Glucarate utilization; Galactarate utilization 10 14
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 5
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 4 4
TF HypR Proline Proline and 4-hydrohyproline utilization 2 1
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 10 8
TF LiuQ Branched-chain amino acid degradation 3 4
TF LldR L-lactate Lactate utilization 2 2
TF MerR Mercury ion, (Hg2+) Mercury resistance 1 1
TF MetR Homocysteine Methionine biosynthesis 4 4
TF ModE2 Molybdate Molybdopterin biosynthesis 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NsrR Nitric oxide Nitrosative stress response 4 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 3
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 3 3
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 2 1
TF PdxW2 Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF PsrA Oleate Fatty acid degradation 2 2
TF PtxS 2-keto-D-gluconate 2-ketogluconate utilization 2 1
TF RbsR Ribose Ribose utilization 1 1
TF SdhR Tricarboxylic acid cycle 4 4
TF SoxR Paraquat Superoxide stress response 2 2
TF UraR Uracil Pyrimidine utilization 1 2
TF UreR 2 4
TF UxuR2 Glucuronate utilization; Galacturonate utilization 3 7
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 2
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 7 6
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 1 2
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 3 3
RNA mini-ykkC Multidrug resistance 1 1
RNA sucA Tricarboxylic acid cycle 1 1
RNA yybP-ykoY 1 1
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