Regulon of UxuR2 in Burkholderia glumae BGR1
| Regulator type: | Transcription factor |
| TF locus tag: | bglu_2g18460, bglu_2g15480 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | |
| Regulog: | UxuR2 - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/Others
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -122
Score: 4.5 Sequence: CTATTGGTAAGACCCATTA
Position: -94
Score: 5 Sequence: ATATTGGCTTGACCAAATT
Position: -51
Score: 4.3 Sequence: CAATTGGACTGACCAGCGC
Locus tag: bglu_2g18470
Name: mglA Funciton: sugar ABC transporter, ATP-binding component
Locus tag: bglu_2g18480
Name: Bamb_1227 Funciton: sugar ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: bglu_2g18490
Name: Bamb_1226 Funciton: sugar ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: bglu_2g18500
Name: tas Funciton: L-fuco-beta-pyranose dehydrogenase
Locus tag: bglu_2g18510
Name: COG3618 Funciton: Amidohydrolase 2
Locus tag: bglu_2g18520
Name: tdh Funciton: Alcohol dehydrogenase GroES-like
Locus tag: bglu_2g18530
Name: uxaB Funciton: Altronate oxidoreductase
Locus tag: bglu_2g18540
Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7) |
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mglA
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sugar ABC transporter, ATP-binding component
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Bamb_1227
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sugar ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
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Bamb_1226
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sugar ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
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tas
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L-fuco-beta-pyranose dehydrogenase
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COG3618
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Amidohydrolase 2
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tdh
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Alcohol dehydrogenase GroES-like
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uxaB
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Altronate oxidoreductase
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uxaA
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Altronate hydrolase (EC 4.2.1.7)
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Position: -198
Score: 4.3 Sequence: GCGCTGGTCAGTCCAATTG
Position: -155
Score: 5 Sequence: AATTTGGTCAAGCCAATAT
Position: -127
Score: 4.5 Sequence: TAATGGGTCTTACCAATAG
Locus tag: bglu_2g18460
Name: uxuR2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family |
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uxuR2
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Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
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Position: -53
Score: 4.5 Sequence: CCACTGGTCCGGCCAATTC
Locus tag: bglu_2g15460
Name: null Funciton: Short-chain dehydrogenase/reductase SDR
Locus tag: bglu_2g15470
Name: mhpD Funciton: 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Locus tag: bglu_2g15480
Name: uxuR2-2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family |
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Short-chain dehydrogenase/reductase SDR
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mhpD
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5-carboxymethyl-2-hydroxymuconate delta-isomerase
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uxuR2-2
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Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |