Regulon of GguR in Burkholderia glumae BGR1
| Regulator type: | Transcription factor |
| TF locus tag: | bglu_1g09940 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucarate utilization; Galactarate utilization |
| Effector: | |
| Regulog: | GguR - Burkholderia |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By trascription factor - GguR
- By TF family - GntR/Others
- By pathway - Glucarate utilization
- By pathway - Galactarate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -207
Score: 5 Sequence: ATGTCATCAGACAACGT
Locus tag: bglu_2g00180
Name: gudD Funciton: Glucarate dehydratase (EC 4.2.1.40)
Locus tag: bglu_2g00190
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) |
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gudD
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Glucarate dehydratase (EC 4.2.1.40)
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kdgD
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5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
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Position: -186
Score: 4.9 Sequence: CAGTCATCATACAACAT
Position: -75
Score: 5.2 Sequence: ATGTTGTACGATGACAT
Locus tag: bglu_2g03730
Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) |
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kdgD
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5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
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Position: -180
Score: 4.5 Sequence: ACGTTGTCTGACGAGAT
Position: -90
Score: 4.6 Sequence: AAGTGGTACGATGACTG
Locus tag: bglu_2g04250
Name: exuT Funciton: Hexuronate transporter, MFS family
Locus tag: bglu_2g04260
Name: agl Funciton: Alpha-glucosidase (EC 3.2.1.20)
Locus tag: bglu_2g04270
Name: omp Funciton: Outer membrane porin protein 32 precursor |
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exuT
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Hexuronate transporter, MFS family
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agl
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Alpha-glucosidase (EC 3.2.1.20)
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omp
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Outer membrane porin protein 32 precursor
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Position: -77
Score: 5.1 Sequence: ATGTCATCGTATGACGT
Locus tag: bglu_2g07210
Name: pgl Funciton: Polygalacturonase (EC 3.2.1.15) |
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pgl
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Polygalacturonase (EC 3.2.1.15)
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Position: -212
Score: 5.2 Sequence: ATGTCGTCGTACAACTT
Locus tag: bglu_2g03710
Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) |
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kgsD
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Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
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Position: -99
Score: 5.1 Sequence: CAGTCATCGGATGACTT
Position: -94
Score: 4.4 Sequence: CAGTCATCGTATAAGAT
Locus tag: bglu_1g09940
Name: gguR Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
Locus tag: bglu_1g09950
Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) |
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gguR
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Predicted D-glucarate or D-galactorate utilization regulator, GntR family
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udh
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Uronate dehydrogenase (EC 1.1.1.203)
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Position: -164
Score: 5.2 Sequence: ATGTCATCGTACAACAT
Position: -53
Score: 4.9 Sequence: ATGTTGTATGATGACTG
Locus tag: bglu_2g03740
Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) |
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garD
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D-galactarate dehydratase (EC 4.2.1.42)
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Position: -497
Score: 4.9 Sequence: CAGTCGTCTTATAACAT
Locus tag: bglu_2g13770
Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: bglu_2g13760
Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: bglu_2g13750
Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component |
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uxuP
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Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
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uxuQ
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Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
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uxuM
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Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
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Position: -114
Score: 4.9 Sequence: AAGTTATATGATGACGT
Locus tag: bglu_2g05570
Name: uxuF Funciton: Predicted uronate lactonase, PF10282 family |
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uxuF
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Predicted uronate lactonase, PF10282 family
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Position: -69
Score: 5.2 Sequence: AAGTTGTACGACGACAT
Locus tag: bglu_2g03700
Name: gudP Funciton: D-glucarate permease |
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gudP
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D-glucarate permease
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |