Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Proteus mirabilis HI4320

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AcrR Rhodamine 6G; Ethidium bromide; Proflavin Multidrug resistance 2 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 9 19
TF BetI Choline Glycine betaine synthesis 2 2
TF BirA Biotin Biotin biosynthesis 3 2
TF Crp Cyclic 3',5'-AMP Carbon catabolism 173 171
TF CscR Sucrose Sucrose utilization 3 4
TF CueR Copper ion, (Cu+) Copper resistance 3 3
TF DeoR Deoxyribonucleoside utilization 3 6
TF FabR Unsaturated acyl-ACP; Unsaturated acyl-CoA Fatty acid biosynthesis 3 3
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 12 9
TF Fnr Oxygen Energy metabolism; Anaerobic metabolism 61 59
TF FruR Fructose-1-phosphate; Fructose-1,6-diphosphate Central carbohydrate metabolism 22 12
TF Fur Iron ion, (Fe2+) Iron homeostasis 39 66
TF GalR/GalS Galactose Galactose utilization 3 5
TF GcvA Glycine Glycine metabolism 2 2
TF GlpR Glycerol 3-phosphate Glycerol utilization 7 5
TF GntR Gluconate Gluconate utilization 2 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 6 5
TF IclR Pyruvate; Glyoxylate Glyoxylate bypass 1 1
TF IlvY 2-Acetolactate Branched-chain amino acid biosynthesis 2 4
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 3 3
TF LeuO Guanosine 3',5'-bis(diphosphate) 1 1
TF LexA DNA damage SOS response 22 18
TF LysR LL-2,6-Diaminopimelate Lysine biosynthesis 2 2
TF MetJ S-adenosylmethionine Methionine metabolism; Methionine biosynthesis 14 10
TF MetR Homocysteine Methionine biosynthesis 10 14
TF ModE Molybdate Molybdopterin biosynthesis; Molybdenum homeostasis 3 4
TF MprA 2,4-Dinitrophenol; Carbonyl cyanide m-chlorophenylhydrazone Multidrug resistance 3 3
TF MurR N-acetylmuramate-6-phosphate N-acetylmuramate utilization 1 1
TF NadR NAD NAD biosynthesis 4 3
TF NagC N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 4 5
TF NarP Nitrate; Nitrite Nitrate and nitrite respiration 18 4
TF NhaR Potassium ion Osmotic stress response 1 1
TF NrdR Deoxyribonucleotides Ribonucleotide reductases 3 6
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 2 6
TF NsrR Nitric oxide Nitrosative stress response 8 7
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 4 4
TF PMI2934 Sugar utilization 1 1
TF PMI3555 2 4
TF PdhR Pyruvate Pyruvate metabolism 5 3
TF PurR Hypoxanthine; Guanine Purine metabolism 29 26
TF QorR Energy metabolism 2 2
TF RbsR Ribose Ribose utilization 1 1
TF SgaR Ascorbate-6-phosphate Ascorbate utilization 2 4
TF SiaR Glucosamine-6-phosphate Sialic acid utilization 2 4
TF TreR Trehalose-6-phosphate Trehalose utilization 1 1
TF TrpR Tryptophan Tryptophan biosynthesis 5 2
TF TtrR Tetrathionate Tetrathionate reduction 2 2
TF TyrR Tyrosine; Phenylalanine Aromatic amino acid metabolism 7 8
TF YdcR 2 1
TF ZntR Zinc ion, (Zn2+) Zinc resistance 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 5 5
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 1 1
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA His_leader Histidine biosynthesis 1 1
RNA Leu_leader Branched-chain amino acid biosynthesis 1 1
RNA MOCO_RNA_motif Molybdenum Molybdopterin biosynthesis 1 1
RNA S15 Ribosome biogenesis 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 3 3
RNA Thr_leader Threonine biosynthesis 1 1
RNA Trp_leader Tryptophan biosynthesis 1 1
RNA mini-ykkC Multidrug resistance 1 1
RNA ykoK Magnesium ion, (Mg2+) Magnesium homeostasis 1 1
RNA yybP-ykoY 1 1
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