Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Proteus mirabilis HI4320

Properties
Regulator type: Transcription factor
TF locus tag: PMI0543
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Enterobacteriales
Statistics of regulated genes:
- Genes 91
- Operons 35
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 656 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -179
Score: 4.2
Sequence: AATATTGAGAATGATAATT
Position: -173
Score: 4.5
Sequence: GAGAATGATAATTATTCAA
Locus tag: PMI0543
Name: fur
Funciton: ferric uptake transcription regulator
PMI0543
fur
ferric uptake transcription regulator
Position: -149
Score: 4.5
Sequence: AATAATGATAAACACTATT
Position: -84
Score: 4.3
Sequence: AATAATGAAACCTATTTTC
Locus tag: PMI2204
Name: null
Funciton: pirin-like protein
PMI2204
pirin-like protein
Position: -42
Score: 4.4
Sequence: AATAACGATTATTAATATA
Locus tag: PMI2675
Name: null
Funciton: iron compound ABC transporter, periplasmic protein
Locus tag: PMI2676
Name: null
Funciton: iron compound ABC transporter, permease
Locus tag: PMI2677
Name: null
Funciton: iron compound ABC transporter, ATP-binding protein
Locus tag: PMI2678
Name: null
Funciton: methyltransferase domain protein
Locus tag: PMI2679
Name: modD
Funciton: molybdenum transport protein
Locus tag: PMI2680
Name: prrA
Funciton: TonB-dependent receptor
PMI2675
iron compound ABC transporter, periplasmic protein
PMI2676
iron compound ABC transporter, permease
PMI2677
iron compound ABC transporter, ATP-binding protein
PMI2678
methyltransferase domain protein
PMI2679
modD
molybdenum transport protein
PMI2680
prrA
TonB-dependent receptor
Position: -300
Score: 4.1
Sequence: ACTAACGATAATTAATTTT
Locus tag: PMI0070
Name: ydhY
Funciton: oxidoreductase, Fe-S subunit
Locus tag: PMI0069
Name: ydhV
Funciton: aldehyde ferredoxin oxidoreductase
Locus tag: PMI0068
Name: ydhW
Funciton: subunit of oxidoreductase
Locus tag: PMI0067
Name: ydhX
Funciton: 4Fe-4S ferridoxin-type protein
Locus tag: PMI0066
Name: ydhU
Funciton: oxidoreductase, cytochrome b subunit
Locus tag: PMI0065
Name: ydhT
Funciton: subunit of oxidoreductase
PMI0070
ydhY
oxidoreductase, Fe-S subunit
PMI0069
ydhV
aldehyde ferredoxin oxidoreductase
PMI0068
ydhW
subunit of oxidoreductase
PMI0067
ydhX
4Fe-4S ferridoxin-type protein
PMI0066
ydhU
oxidoreductase, cytochrome b subunit
PMI0065
ydhT
subunit of oxidoreductase
Position: -115
Score: 4.2
Sequence: GATATTGCTTATTATTAAT
Position: -75
Score: 4.2
Sequence: AATATTGATTATAAAAATT
Locus tag: PMI3708
Name: null
Funciton: ECF-family sigma factor
Locus tag: PMI3707
Name: null
Funciton: FecR-like transcriptional regulator
Locus tag: PMI3706
Name: yddB
Funciton: TonB-dependent receptor
PMI3708
ECF-family sigma factor
PMI3707
FecR-like transcriptional regulator
PMI3706
yddB
TonB-dependent receptor
Position: -64
Score: 4.2
Sequence: GCAAATGATATTAATTCGC
Position: -58
Score: 4.4
Sequence: GATATTAATTCGCATTAAC
Locus tag: PMI2596
Name: null
Funciton: siderophore TonB-dependent receptor
PMI2596
siderophore TonB-dependent receptor
Position: -300
Score: 4.5
Sequence: GTAATTAATTATCATTACC
Position: -294
Score: 4
Sequence: AATTATCATTACCATTTAA
Locus tag: PMI1486
Name: adhE
Funciton: iron-containing aldehyde-alcohol dehydrogenase
PMI1486
adhE
iron-containing aldehyde-alcohol dehydrogenase
Position: -115
Score: 4.3
Sequence: AATTTTTATAATCAATATT
Position: -75
Score: 4.5
Sequence: ATTAATAATAAGCAATATC
Locus tag: PMI3709
Name: null
Funciton: TonB-like protein
PMI3709
TonB-like protein
Position: -10
Score: 4.5
Sequence: GAGAATAATAATGATTAAA
Locus tag: PMI2604
Name: nrpB
Funciton: siderophore ABC transporter, ATP-binding/permease protein
PMI2604
nrpB
siderophore ABC transporter, ATP-binding/permease protein
Position: -191
Score: 5
Sequence: GAAAATAATTATCATTTTA
Locus tag: PMI1814
Name: phsA
Funciton: thiosulfate reductase precursor
PMI1814
phsA
thiosulfate reductase precursor
Position: -95
Score: 4
Sequence: TCAAATGCGAATCATTTTC
Locus tag: PMI3448
Name: null
Funciton: lipoprotein
PMI3448
lipoprotein
Position: -103
Score: 4.9
Sequence: TAGAATAATAATAATTATC
Position: -97
Score: 5
Sequence: AATAATAATTATCATTAGT
Locus tag: PMI0363
Name: null
Funciton: TonB-dependent siderophore receptor
PMI0363
TonB-dependent siderophore receptor
Position: -75
Score: 4.8
Sequence: GATATTGATAATTATTCTT
Position: -69
Score: 4.6
Sequence: GATAATTATTCTTATTAAT
Locus tag: PMI1551
Name: cjrA
Funciton: putative lipoprotein of unknown function DUF399
Locus tag: PMI1550
Name: cjrB
Funciton: TonB family protein
PMI1551
cjrA
putative lipoprotein of unknown function DUF399
PMI1550
cjrB
TonB family protein
Position: -4
Score: 5.1
Sequence: TGTAATGATAATAATTATC
Position: 2
Score: 5.4
Sequence: GATAATAATTATCATTAAC
Locus tag: PMI0409
Name: hemR
Funciton: TonB-edependent hemin receptor
PMI0409
hemR
TonB-edependent hemin receptor
Position: -184
Score: 4.7
Sequence: GTTAATGATAATCAATTCC
Position: -178
Score: 4.1
Sequence: GATAATCAATTCCATTAAT
Locus tag: PMI1007
Name: ftnA
Funciton: ferritin
PMI1007
ftnA
ferritin
Position: -96
Score: 4.8
Sequence: GATAATGGTAACTATTATC
Position: -90
Score: 4.3
Sequence: GGTAACTATTATCGTTATA
Locus tag: PMI0229
Name: yiuB
Funciton: ferric-enterobactin ABC-transporter, permease component
Locus tag: PMI0230
Name: yiuC
Funciton: ferric-enterobactin ABC transporter ATP-binding protein
PMI0229
yiuB
ferric-enterobactin ABC-transporter, permease component
PMI0230
yiuC
ferric-enterobactin ABC transporter ATP-binding protein
Position: -138
Score: 4
Sequence: AAAGATGGTTATAATTCTC
Position: -132
Score: 4.3
Sequence: GGTTATAATTCTCATTTGC
Position: -59
Score: 4.8
Sequence: GTTAATAATTATCAGTATC
Position: -53
Score: 4.6
Sequence: AATTATCAGTATCATTATT
Locus tag: PMI2920
Name: feoA
Funciton: ferrous iron transport protein A
Locus tag: PMI2921
Name: feoB
Funciton: ferrous iron transport protein B
Locus tag: PMI2922
Name: null
Funciton: ferrous iron transport protein C
PMI2920
feoA
ferrous iron transport protein A
PMI2921
feoB
ferrous iron transport protein B
PMI2922
ferrous iron transport protein C
Position: -63
Score: 4.2
Sequence: TGAAATGATATTGATAATC
Position: -57
Score: 5.5
Sequence: GATATTGATAATCATTATC
Locus tag: PMI1027
Name: sitA
Funciton: iron ABC transporter, periplasmic substrate-binding protein
Locus tag: PMI1026
Name: sitB
Funciton: ATP-binding protein for iron and manganese ABC transporter
Locus tag: PMI1025
Name: sitC
Funciton: iron ABC transporter, membrane protein
Locus tag: PMI1024
Name: sitD
Funciton: iron ABC transporter, membrane protein
PMI1027
sitA
iron ABC transporter, periplasmic substrate-binding protein
PMI1026
sitB
ATP-binding protein for iron and manganese ABC transporter
PMI1025
sitC
iron ABC transporter, membrane protein
PMI1024
sitD
iron ABC transporter, membrane protein
Position: -52
Score: 5.1
Sequence: GATAACGATAATGATTATC
Position: -46
Score: 5.4
Sequence: GATAATGATTATCATAATC
Position: -40
Score: 4.4
Sequence: GATTATCATAATCATAACC
Locus tag: PMI1424
Name: hemP
Funciton: hemin uptake protein
Locus tag: PMI1425
Name: hemR
Funciton: TonB-dependent outer membrane hemin receptor
Locus tag: PMI1426
Name: hemR
Funciton: TonB-dependent outer membrane hemin receptor
Locus tag: PMI1427
Name: hemS
Funciton: hemin transport protein
Locus tag: PMI1428
Name: hemT
Funciton: hemin ABC transporter, substrate-binding protein
Locus tag: PMI1429
Name: hemU
Funciton: hemin transport ABC permease protein
Locus tag: PMI1430
Name: hemV
Funciton: hemin transport system ATP-binding protein
PMI1424
hemP
hemin uptake protein
PMI1425
hemR
TonB-dependent outer membrane hemin receptor
PMI1426
hemR
TonB-dependent outer membrane hemin receptor
PMI1427
hemS
hemin transport protein
PMI1428
hemT
hemin ABC transporter, substrate-binding protein
PMI1429
hemU
hemin transport ABC permease protein
PMI1430
hemV
hemin transport system ATP-binding protein
Position: -66
Score: 4.4
Sequence: GATAAGGGTTATCATTACC
Position: -60
Score: 4
Sequence: GGTTATCATTACCATTAGA
Locus tag: PMI1416
Name: sufA
Funciton: scaffold protein for iron-sulfur cluster assembly
Locus tag: PMI1415
Name: sufB
Funciton: FeS assembly protein
Locus tag: PMI1414
Name: sufC
Funciton: FeS assembly ATPase
Locus tag: PMI1413
Name: sufD
Funciton: FeS assembly protein
Locus tag: PMI1412
Name: sufS
Funciton: Selenocysteine lyase
Locus tag: PMI1411
Name: sufE
Funciton: cysteine desulfuration protein
PMI1416
sufA
scaffold protein for iron-sulfur cluster assembly
PMI1415
sufB
FeS assembly protein
PMI1414
sufC
FeS assembly ATPase
PMI1413
sufD
FeS assembly protein
PMI1412
sufS
Selenocysteine lyase
PMI1411
sufE
cysteine desulfuration protein
Position: -27
Score: 5.3
Sequence: AATAATGAAAATCATTATC
Position: -21
Score: 5.2
Sequence: GAAAATCATTATCATTAAC
Locus tag: PMI2497
Name: yjjZ
Funciton: putative membrane protein
PMI2497
yjjZ
putative membrane protein
Position: -57
Score: 4.2
Sequence: TGAAATAACAATGATTATC
Position: -51
Score: 4.8
Sequence: AACAATGATTATCATTTAC
Locus tag: PMI3252
Name: bfd
Funciton: bacterioferritin-associated ferredoxin
Locus tag: PMI3253
Name: bfr
Funciton: bacterioferrin
PMI3252
bfd
bacterioferritin-associated ferredoxin
PMI3253
bfr
bacterioferrin
Position: -66
Score: 4.6
Sequence: AATAGTGATAATGACTATC
Position: -60
Score: 5
Sequence: GATAATGACTATCATTATT
Locus tag: PMI1437
Name: viuB
Funciton: FAD-binding 9 siderophore-interacting domain protein
PMI1437
viuB
FAD-binding 9 siderophore-interacting domain protein
Position: -217
Score: 4.1
Sequence: GTTAATGCGAATTAATATC
Position: -211
Score: 4.2
Sequence: GCGAATTAATATCATTTGC
Locus tag: PMI2597
Name: ybtX
Funciton: MFS siderophore permease, RhtX/FptX family
PMI2597
ybtX
MFS siderophore permease, RhtX/FptX family
Position: -41
Score: 4.6
Sequence: AAGAATAATAACAATTATC
Position: -35
Score: 4.3
Sequence: AATAACAATTATCATTCAA
Locus tag: PMI0176
Name: null
Funciton: periplasmic protein involved in Fe2+ uptake
Locus tag: PMI0175
Name: null
Funciton: hypothetical protein
Locus tag: PMI0174
Name: yijD
Funciton: iron permease FTR1
Locus tag: PMI0173
Name: ycdO
Funciton: Ferrous ion transport periplasmic protein
Locus tag: PMI0172
Name: ycdB
Funciton: Dyp-type peroxidase
PMI0176
periplasmic protein involved in Fe2+ uptake
PMI0175
hypothetical protein
PMI0174
yijD
iron permease FTR1
PMI0173
ycdO
Ferrous ion transport periplasmic protein
PMI0172
ycdB
Dyp-type peroxidase
Position: -95
Score: 4.6
Sequence: GGATATGATAATGATTTTC
Position: -89
Score: 5.2
Sequence: GATAATGATTTTCATTAAC
Locus tag: PMI3036
Name: sodA
Funciton: manganese/iron superoxide dismutase
PMI3036
sodA
manganese/iron superoxide dismutase
Position: -131
Score: 4.7
Sequence: GATAATCTTTATCATTAGC
Locus tag: PMI1378
Name: sapA
Funciton: ABC peptide transport periplasmic protein
Locus tag: PMI1379
Name: sapB
Funciton: ABC peptide transport permease protein
Locus tag: PMI1380
Name: sapC
Funciton: ABC peptide transport permease protein
Locus tag: PMI1381
Name: sapD
Funciton: ABC peptide transport ATPase protein
Locus tag: PMI1382
Name: sapF
Funciton: ABC peptide transport ATPase protein
PMI1378
sapA
ABC peptide transport periplasmic protein
PMI1379
sapB
ABC peptide transport permease protein
PMI1380
sapC
ABC peptide transport permease protein
PMI1381
sapD
ABC peptide transport ATPase protein
PMI1382
sapF
ABC peptide transport ATPase protein
Position: -220
Score: 4.7
Sequence: GATAATTATACTCATTAAA
Position: -199
Score: 4.3
Sequence: AGTAATATTAATAATTATC
Position: -193
Score: 4.1
Sequence: ATTAATAATTATCTTTCTT
Locus tag: PMI1869
Name: null
Funciton: putative membrane protein
PMI1869
putative membrane protein
Position: -170
Score: 4.8
Sequence: AGTAATGATAATTACTATC
Locus tag: PMI0029
Name: exbB
Funciton: TonB-dependent siderophore transporter component ExbB
Locus tag: PMI0030
Name: exbD
Funciton: TonB-dependent siderophore transporter component ExbD
PMI0029
exbB
TonB-dependent siderophore transporter component ExbB
PMI0030
exbD
TonB-dependent siderophore transporter component ExbD
Position: -217
Score: 4.1
Sequence: GTTAATGCGAATTAATATC
Position: -211
Score: 4.2
Sequence: GCGAATTAATATCATTTGC
Locus tag: PMI2597
Name: YbtX
Funciton: MFS-family transporter
Locus tag: PMI2598
Name: null
Funciton: putative Methyltransferase type 12
Locus tag: PMI2599
Name: irp2
Funciton: non-ribosomal peptide synthase (siderophore synthase)
Locus tag: PMI2600
Name: nrpS
Funciton: non-ribosomal peptide synthase (siderophore synthase)
Locus tag: PMI2601
Name: nrpU
Funciton: thiazolinyl-S-HMWP1 reductase, siderophore synthesis
Locus tag: PMI2602
Name: nrpT
Funciton: siderophore biosynthetic protein (thioesterase)
Locus tag: PMI2603
Name: nrpA
Funciton: siderophore ABC transporter, ATP-binding/permease protein
PMI2597
YbtX
MFS-family transporter
PMI2598
putative Methyltransferase type 12
PMI2599
irp2
non-ribosomal peptide synthase (siderophore synthase)
PMI2600
nrpS
non-ribosomal peptide synthase (siderophore synthase)
PMI2601
nrpU
thiazolinyl-S-HMWP1 reductase, siderophore synthesis
PMI2602
nrpT
siderophore biosynthetic protein (thioesterase)
PMI2603
nrpA
siderophore ABC transporter, ATP-binding/permease protein
Position: -75
Score: 4.2
Sequence: TGAATTGATAACAATTATC
Position: -69
Score: 4.6
Sequence: GATAACAATTATCATTACT
Locus tag: PMI2503
Name: null
Funciton: putative enterochelin esterase
PMI2503
putative enterochelin esterase
Position: -158
Score: 4.4
Sequence: GAGAATGAGATTGATTATT
Position: -152
Score: 4.7
Sequence: GAGATTGATTATTATTTAC
Locus tag: PMI0232
Name: null
Funciton: siderophore biosynthesis protein, IucA / IucC family
Locus tag: PMI0233
Name: null
Funciton: TonB-dependent siderophore receptor
Locus tag: PMI0234
Name: null
Funciton: putative lysine/ornithine decarboxylase
Locus tag: PMI0235
Name: null
Funciton: putative cystathionine beta-synthase
Locus tag: PMI0236
Name: null
Funciton: octopine/opine/tauropine dehydrogenase
Locus tag: PMI0237
Name: null
Funciton: Major facilitator superfamily MFS-1
Locus tag: PMI0238
Name: null
Funciton: iron ABC transporter, periplasmic substrate-binding protein
Locus tag: PMI0239
Name: null
Funciton: putative nuclease or transcriptional regulator
PMI0232
siderophore biosynthesis protein, IucA / IucC family
PMI0233
TonB-dependent siderophore receptor
PMI0234
putative lysine/ornithine decarboxylase
PMI0235
putative cystathionine beta-synthase
PMI0236
octopine/opine/tauropine dehydrogenase
PMI0237
Major facilitator superfamily MFS-1
PMI0238
iron ABC transporter, periplasmic substrate-binding protein
PMI0239
putative nuclease or transcriptional regulator
Position: -80
Score: 4.7
Sequence: GTAAATAATAATCAATCTC
Position: -74
Score: 4.6
Sequence: AATAATCAATCTCATTCTC
Locus tag: PMI0231
Name: null
Funciton: citrate lyase beta chain
PMI0231
citrate lyase beta chain
Position: -55
Score: 4.8
Sequence: GATAATATTAATCATTCTC
Position: -49
Score: 4.3
Sequence: ATTAATCATTCTCATTACT
Locus tag: PMI1945
Name: ireA
Funciton: TonB-dependent ferric siderophore receptor
PMI1945
ireA
TonB-dependent ferric siderophore receptor
Position: -121
Score: 4.1
Sequence: GTGAATTAGTATCATTACT
Locus tag: PMI2957
Name: fatB
Funciton: iron ABC transporter, substrate-binding protein
Locus tag: PMI2958
Name: fatD
Funciton: iron ABC transporter, permease component
Locus tag: PMI2959
Name: fatC
Funciton: iron ABC transporter, permease component
Locus tag: PMI2960
Name: fecE
Funciton: iron ABC transporter, ATP-binding protein
PMI2957
fatB
iron ABC transporter, substrate-binding protein
PMI2958
fatD
iron ABC transporter, permease component
PMI2959
fatC
iron ABC transporter, permease component
PMI2960
fecE
iron ABC transporter, ATP-binding protein
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