Regulon of Fur in Proteus mirabilis HI4320

Properties
Regulator type:	Transcription factor
TF locus tag:	PMI0543
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Enterobacteriales
Statistics of regulated genes:
- Genes	91
- Operons	35
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 656 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -179 Score: 4.2 Sequence: AATATTGAGAATGATAATT Position: -173 Score: 4.5 Sequence: GAGAATGATAATTATTCAA Locus tag: PMI0543 Name: fur Funciton: ferric uptake transcription regulator
	PMI0543	fur	ferric uptake transcription regulator
Position: -149 Score: 4.5 Sequence: AATAATGATAAACACTATT Position: -84 Score: 4.3 Sequence: AATAATGAAACCTATTTTC Locus tag: PMI2204 Name: null Funciton: pirin-like protein
	PMI2204		pirin-like protein
Position: -42 Score: 4.4 Sequence: AATAACGATTATTAATATA Locus tag: PMI2675 Name: null Funciton: iron compound ABC transporter, periplasmic protein Locus tag: PMI2676 Name: null Funciton: iron compound ABC transporter, permease Locus tag: PMI2677 Name: null Funciton: iron compound ABC transporter, ATP-binding protein Locus tag: PMI2678 Name: null Funciton: methyltransferase domain protein Locus tag: PMI2679 Name: modD Funciton: molybdenum transport protein Locus tag: PMI2680 Name: prrA Funciton: TonB-dependent receptor
	PMI2675		iron compound ABC transporter, periplasmic protein
	PMI2676		iron compound ABC transporter, permease
	PMI2677		iron compound ABC transporter, ATP-binding protein
	PMI2678		methyltransferase domain protein
	PMI2679	modD	molybdenum transport protein
	PMI2680	prrA	TonB-dependent receptor
Position: -300 Score: 4.1 Sequence: ACTAACGATAATTAATTTT Locus tag: PMI0070 Name: ydhY Funciton: oxidoreductase, Fe-S subunit Locus tag: PMI0069 Name: ydhV Funciton: aldehyde ferredoxin oxidoreductase Locus tag: PMI0068 Name: ydhW Funciton: subunit of oxidoreductase Locus tag: PMI0067 Name: ydhX Funciton: 4Fe-4S ferridoxin-type protein Locus tag: PMI0066 Name: ydhU Funciton: oxidoreductase, cytochrome b subunit Locus tag: PMI0065 Name: ydhT Funciton: subunit of oxidoreductase
	PMI0070	ydhY	oxidoreductase, Fe-S subunit
	PMI0069	ydhV	aldehyde ferredoxin oxidoreductase
	PMI0068	ydhW	subunit of oxidoreductase
	PMI0067	ydhX	4Fe-4S ferridoxin-type protein
	PMI0066	ydhU	oxidoreductase, cytochrome b subunit
	PMI0065	ydhT	subunit of oxidoreductase
Position: -115 Score: 4.2 Sequence: GATATTGCTTATTATTAAT Position: -75 Score: 4.2 Sequence: AATATTGATTATAAAAATT Locus tag: PMI3708 Name: null Funciton: ECF-family sigma factor Locus tag: PMI3707 Name: null Funciton: FecR-like transcriptional regulator Locus tag: PMI3706 Name: yddB Funciton: TonB-dependent receptor
	PMI3708		ECF-family sigma factor
	PMI3707		FecR-like transcriptional regulator
	PMI3706	yddB	TonB-dependent receptor
Position: -64 Score: 4.2 Sequence: GCAAATGATATTAATTCGC Position: -58 Score: 4.4 Sequence: GATATTAATTCGCATTAAC Locus tag: PMI2596 Name: null Funciton: siderophore TonB-dependent receptor
	PMI2596		siderophore TonB-dependent receptor
Position: -300 Score: 4.5 Sequence: GTAATTAATTATCATTACC Position: -294 Score: 4 Sequence: AATTATCATTACCATTTAA Locus tag: PMI1486 Name: adhE Funciton: iron-containing aldehyde-alcohol dehydrogenase
	PMI1486	adhE	iron-containing aldehyde-alcohol dehydrogenase
Position: -115 Score: 4.3 Sequence: AATTTTTATAATCAATATT Position: -75 Score: 4.5 Sequence: ATTAATAATAAGCAATATC Locus tag: PMI3709 Name: null Funciton: TonB-like protein
	PMI3709		TonB-like protein
Position: -10 Score: 4.5 Sequence: GAGAATAATAATGATTAAA Locus tag: PMI2604 Name: nrpB Funciton: siderophore ABC transporter, ATP-binding/permease protein
	PMI2604	nrpB	siderophore ABC transporter, ATP-binding/permease protein
Position: -191 Score: 5 Sequence: GAAAATAATTATCATTTTA Locus tag: PMI1814 Name: phsA Funciton: thiosulfate reductase precursor
	PMI1814	phsA	thiosulfate reductase precursor
Position: -95 Score: 4 Sequence: TCAAATGCGAATCATTTTC Locus tag: PMI3448 Name: null Funciton: lipoprotein
	PMI3448		lipoprotein
Position: -103 Score: 4.9 Sequence: TAGAATAATAATAATTATC Position: -97 Score: 5 Sequence: AATAATAATTATCATTAGT Locus tag: PMI0363 Name: null Funciton: TonB-dependent siderophore receptor
	PMI0363		TonB-dependent siderophore receptor
Position: -75 Score: 4.8 Sequence: GATATTGATAATTATTCTT Position: -69 Score: 4.6 Sequence: GATAATTATTCTTATTAAT Locus tag: PMI1551 Name: cjrA Funciton: putative lipoprotein of unknown function DUF399 Locus tag: PMI1550 Name: cjrB Funciton: TonB family protein
	PMI1551	cjrA	putative lipoprotein of unknown function DUF399
	PMI1550	cjrB	TonB family protein
Position: -4 Score: 5.1 Sequence: TGTAATGATAATAATTATC Position: 2 Score: 5.4 Sequence: GATAATAATTATCATTAAC Locus tag: PMI0409 Name: hemR Funciton: TonB-edependent hemin receptor
	PMI0409	hemR	TonB-edependent hemin receptor
Position: -184 Score: 4.7 Sequence: GTTAATGATAATCAATTCC Position: -178 Score: 4.1 Sequence: GATAATCAATTCCATTAAT Locus tag: PMI1007 Name: ftnA Funciton: ferritin
	PMI1007	ftnA	ferritin
Position: -96 Score: 4.8 Sequence: GATAATGGTAACTATTATC Position: -90 Score: 4.3 Sequence: GGTAACTATTATCGTTATA Locus tag: PMI0229 Name: yiuB Funciton: ferric-enterobactin ABC-transporter, permease component Locus tag: PMI0230 Name: yiuC Funciton: ferric-enterobactin ABC transporter ATP-binding protein
	PMI0229	yiuB	ferric-enterobactin ABC-transporter, permease component
	PMI0230	yiuC	ferric-enterobactin ABC transporter ATP-binding protein
Position: -138 Score: 4 Sequence: AAAGATGGTTATAATTCTC Position: -132 Score: 4.3 Sequence: GGTTATAATTCTCATTTGC Position: -59 Score: 4.8 Sequence: GTTAATAATTATCAGTATC Position: -53 Score: 4.6 Sequence: AATTATCAGTATCATTATT Locus tag: PMI2920 Name: feoA Funciton: ferrous iron transport protein A Locus tag: PMI2921 Name: feoB Funciton: ferrous iron transport protein B Locus tag: PMI2922 Name: null Funciton: ferrous iron transport protein C
	PMI2920	feoA	ferrous iron transport protein A
	PMI2921	feoB	ferrous iron transport protein B
	PMI2922		ferrous iron transport protein C
Position: -63 Score: 4.2 Sequence: TGAAATGATATTGATAATC Position: -57 Score: 5.5 Sequence: GATATTGATAATCATTATC Locus tag: PMI1027 Name: sitA Funciton: iron ABC transporter, periplasmic substrate-binding protein Locus tag: PMI1026 Name: sitB Funciton: ATP-binding protein for iron and manganese ABC transporter Locus tag: PMI1025 Name: sitC Funciton: iron ABC transporter, membrane protein Locus tag: PMI1024 Name: sitD Funciton: iron ABC transporter, membrane protein
	PMI1027	sitA	iron ABC transporter, periplasmic substrate-binding protein
	PMI1026	sitB	ATP-binding protein for iron and manganese ABC transporter
	PMI1025	sitC	iron ABC transporter, membrane protein
	PMI1024	sitD	iron ABC transporter, membrane protein
Position: -52 Score: 5.1 Sequence: GATAACGATAATGATTATC Position: -46 Score: 5.4 Sequence: GATAATGATTATCATAATC Position: -40 Score: 4.4 Sequence: GATTATCATAATCATAACC Locus tag: PMI1424 Name: hemP Funciton: hemin uptake protein Locus tag: PMI1425 Name: hemR Funciton: TonB-dependent outer membrane hemin receptor Locus tag: PMI1426 Name: hemR Funciton: TonB-dependent outer membrane hemin receptor Locus tag: PMI1427 Name: hemS Funciton: hemin transport protein Locus tag: PMI1428 Name: hemT Funciton: hemin ABC transporter, substrate-binding protein Locus tag: PMI1429 Name: hemU Funciton: hemin transport ABC permease protein Locus tag: PMI1430 Name: hemV Funciton: hemin transport system ATP-binding protein
	PMI1424	hemP	hemin uptake protein
	PMI1425	hemR	TonB-dependent outer membrane hemin receptor
	PMI1426	hemR	TonB-dependent outer membrane hemin receptor
	PMI1427	hemS	hemin transport protein
	PMI1428	hemT	hemin ABC transporter, substrate-binding protein
	PMI1429	hemU	hemin transport ABC permease protein
	PMI1430	hemV	hemin transport system ATP-binding protein
Position: -66 Score: 4.4 Sequence: GATAAGGGTTATCATTACC Position: -60 Score: 4 Sequence: GGTTATCATTACCATTAGA Locus tag: PMI1416 Name: sufA Funciton: scaffold protein for iron-sulfur cluster assembly Locus tag: PMI1415 Name: sufB Funciton: FeS assembly protein Locus tag: PMI1414 Name: sufC Funciton: FeS assembly ATPase Locus tag: PMI1413 Name: sufD Funciton: FeS assembly protein Locus tag: PMI1412 Name: sufS Funciton: Selenocysteine lyase Locus tag: PMI1411 Name: sufE Funciton: cysteine desulfuration protein
	PMI1416	sufA	scaffold protein for iron-sulfur cluster assembly
	PMI1415	sufB	FeS assembly protein
	PMI1414	sufC	FeS assembly ATPase
	PMI1413	sufD	FeS assembly protein
	PMI1412	sufS	Selenocysteine lyase
	PMI1411	sufE	cysteine desulfuration protein
Position: -27 Score: 5.3 Sequence: AATAATGAAAATCATTATC Position: -21 Score: 5.2 Sequence: GAAAATCATTATCATTAAC Locus tag: PMI2497 Name: yjjZ Funciton: putative membrane protein
	PMI2497	yjjZ	putative membrane protein
Position: -57 Score: 4.2 Sequence: TGAAATAACAATGATTATC Position: -51 Score: 4.8 Sequence: AACAATGATTATCATTTAC Locus tag: PMI3252 Name: bfd Funciton: bacterioferritin-associated ferredoxin Locus tag: PMI3253 Name: bfr Funciton: bacterioferrin
	PMI3252	bfd	bacterioferritin-associated ferredoxin
	PMI3253	bfr	bacterioferrin
Position: -66 Score: 4.6 Sequence: AATAGTGATAATGACTATC Position: -60 Score: 5 Sequence: GATAATGACTATCATTATT Locus tag: PMI1437 Name: viuB Funciton: FAD-binding 9 siderophore-interacting domain protein
	PMI1437	viuB	FAD-binding 9 siderophore-interacting domain protein
Position: -217 Score: 4.1 Sequence: GTTAATGCGAATTAATATC Position: -211 Score: 4.2 Sequence: GCGAATTAATATCATTTGC Locus tag: PMI2597 Name: ybtX Funciton: MFS siderophore permease, RhtX/FptX family
	PMI2597	ybtX	MFS siderophore permease, RhtX/FptX family
Position: -41 Score: 4.6 Sequence: AAGAATAATAACAATTATC Position: -35 Score: 4.3 Sequence: AATAACAATTATCATTCAA Locus tag: PMI0176 Name: null Funciton: periplasmic protein involved in Fe2+ uptake Locus tag: PMI0175 Name: null Funciton: hypothetical protein Locus tag: PMI0174 Name: yijD Funciton: iron permease FTR1 Locus tag: PMI0173 Name: ycdO Funciton: Ferrous ion transport periplasmic protein Locus tag: PMI0172 Name: ycdB Funciton: Dyp-type peroxidase
	PMI0176		periplasmic protein involved in Fe2+ uptake
	PMI0175		hypothetical protein
	PMI0174	yijD	iron permease FTR1
	PMI0173	ycdO	Ferrous ion transport periplasmic protein
	PMI0172	ycdB	Dyp-type peroxidase
Position: -95 Score: 4.6 Sequence: GGATATGATAATGATTTTC Position: -89 Score: 5.2 Sequence: GATAATGATTTTCATTAAC Locus tag: PMI3036 Name: sodA Funciton: manganese/iron superoxide dismutase
	PMI3036	sodA	manganese/iron superoxide dismutase
Position: -131 Score: 4.7 Sequence: GATAATCTTTATCATTAGC Locus tag: PMI1378 Name: sapA Funciton: ABC peptide transport periplasmic protein Locus tag: PMI1379 Name: sapB Funciton: ABC peptide transport permease protein Locus tag: PMI1380 Name: sapC Funciton: ABC peptide transport permease protein Locus tag: PMI1381 Name: sapD Funciton: ABC peptide transport ATPase protein Locus tag: PMI1382 Name: sapF Funciton: ABC peptide transport ATPase protein
	PMI1378	sapA	ABC peptide transport periplasmic protein
	PMI1379	sapB	ABC peptide transport permease protein
	PMI1380	sapC	ABC peptide transport permease protein
	PMI1381	sapD	ABC peptide transport ATPase protein
	PMI1382	sapF	ABC peptide transport ATPase protein
Position: -220 Score: 4.7 Sequence: GATAATTATACTCATTAAA Position: -199 Score: 4.3 Sequence: AGTAATATTAATAATTATC Position: -193 Score: 4.1 Sequence: ATTAATAATTATCTTTCTT Locus tag: PMI1869 Name: null Funciton: putative membrane protein
	PMI1869		putative membrane protein
Position: -170 Score: 4.8 Sequence: AGTAATGATAATTACTATC Locus tag: PMI0029 Name: exbB Funciton: TonB-dependent siderophore transporter component ExbB Locus tag: PMI0030 Name: exbD Funciton: TonB-dependent siderophore transporter component ExbD
	PMI0029	exbB	TonB-dependent siderophore transporter component ExbB
	PMI0030	exbD	TonB-dependent siderophore transporter component ExbD
Position: -217 Score: 4.1 Sequence: GTTAATGCGAATTAATATC Position: -211 Score: 4.2 Sequence: GCGAATTAATATCATTTGC Locus tag: PMI2597 Name: YbtX Funciton: MFS-family transporter Locus tag: PMI2598 Name: null Funciton: putative Methyltransferase type 12 Locus tag: PMI2599 Name: irp2 Funciton: non-ribosomal peptide synthase (siderophore synthase) Locus tag: PMI2600 Name: nrpS Funciton: non-ribosomal peptide synthase (siderophore synthase) Locus tag: PMI2601 Name: nrpU Funciton: thiazolinyl-S-HMWP1 reductase, siderophore synthesis Locus tag: PMI2602 Name: nrpT Funciton: siderophore biosynthetic protein (thioesterase) Locus tag: PMI2603 Name: nrpA Funciton: siderophore ABC transporter, ATP-binding/permease protein
	PMI2597	YbtX	MFS-family transporter
	PMI2598		putative Methyltransferase type 12
	PMI2599	irp2	non-ribosomal peptide synthase (siderophore synthase)
	PMI2600	nrpS	non-ribosomal peptide synthase (siderophore synthase)
	PMI2601	nrpU	thiazolinyl-S-HMWP1 reductase, siderophore synthesis
	PMI2602	nrpT	siderophore biosynthetic protein (thioesterase)
	PMI2603	nrpA	siderophore ABC transporter, ATP-binding/permease protein
Position: -75 Score: 4.2 Sequence: TGAATTGATAACAATTATC Position: -69 Score: 4.6 Sequence: GATAACAATTATCATTACT Locus tag: PMI2503 Name: null Funciton: putative enterochelin esterase
	PMI2503		putative enterochelin esterase
Position: -158 Score: 4.4 Sequence: GAGAATGAGATTGATTATT Position: -152 Score: 4.7 Sequence: GAGATTGATTATTATTTAC Locus tag: PMI0232 Name: null Funciton: siderophore biosynthesis protein, IucA / IucC family Locus tag: PMI0233 Name: null Funciton: TonB-dependent siderophore receptor Locus tag: PMI0234 Name: null Funciton: putative lysine/ornithine decarboxylase Locus tag: PMI0235 Name: null Funciton: putative cystathionine beta-synthase Locus tag: PMI0236 Name: null Funciton: octopine/opine/tauropine dehydrogenase Locus tag: PMI0237 Name: null Funciton: Major facilitator superfamily MFS-1 Locus tag: PMI0238 Name: null Funciton: iron ABC transporter, periplasmic substrate-binding protein Locus tag: PMI0239 Name: null Funciton: putative nuclease or transcriptional regulator
	PMI0232		siderophore biosynthesis protein, IucA / IucC family
	PMI0233		TonB-dependent siderophore receptor
	PMI0234		putative lysine/ornithine decarboxylase
	PMI0235		putative cystathionine beta-synthase
	PMI0236		octopine/opine/tauropine dehydrogenase
	PMI0237		Major facilitator superfamily MFS-1
	PMI0238		iron ABC transporter, periplasmic substrate-binding protein
	PMI0239		putative nuclease or transcriptional regulator
Position: -80 Score: 4.7 Sequence: GTAAATAATAATCAATCTC Position: -74 Score: 4.6 Sequence: AATAATCAATCTCATTCTC Locus tag: PMI0231 Name: null Funciton: citrate lyase beta chain
	PMI0231		citrate lyase beta chain
Position: -55 Score: 4.8 Sequence: GATAATATTAATCATTCTC Position: -49 Score: 4.3 Sequence: ATTAATCATTCTCATTACT Locus tag: PMI1945 Name: ireA Funciton: TonB-dependent ferric siderophore receptor
	PMI1945	ireA	TonB-dependent ferric siderophore receptor
Position: -121 Score: 4.1 Sequence: GTGAATTAGTATCATTACT Locus tag: PMI2957 Name: fatB Funciton: iron ABC transporter, substrate-binding protein Locus tag: PMI2958 Name: fatD Funciton: iron ABC transporter, permease component Locus tag: PMI2959 Name: fatC Funciton: iron ABC transporter, permease component Locus tag: PMI2960 Name: fecE Funciton: iron ABC transporter, ATP-binding protein
	PMI2957	fatB	iron ABC transporter, substrate-binding protein
	PMI2958	fatD	iron ABC transporter, permease component
	PMI2959	fatC	iron ABC transporter, permease component
	PMI2960	fecE	iron ABC transporter, ATP-binding protein

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Proteus mirabilis HI4320

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --