Regulons of Listeria innocua Clip11262

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis	2	5
TF	BglR	Beta-glucoside	Beta-glucosides utilization	2	2
TF	BglR2	Beta-glucoside-6-phosphate	Beta-glucosides utilization	4	4
TF	BirA	Biotin	Biotin biosynthesis	1	1
TF	CcpB			1	1
TF	CsoR	Copper ion, (Cu+)	Copper resistance	1	1
TF	CzrA	Zinc ion, (Zn2+); Silver ion, (Ag+); Nickel ion, (Ni2+); Copper ion, (Cu2+); Cobalt ion, (Co2+); Cadmium, ion (Cd2+)	Zinc resistance; Nickel resistance; Copper resistance; Cobalt resistance; Cadmium resistance	1	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	16	25
TF	GmuR		Glucomannan utilization	4	4
TF	HisR	Histidine	Histidine biosynthesis	2	2
TF	HrcA	Heat shock	Heat shock response	2	2
TF	LexA	DNA damage	SOS response	12	13
TF	Lmo0031		Sugar utilization	2	4
TF	MdxR	Maltose	Maltodextrin utilization; Maltose utilization	2	2
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	2	2
TF	NagR	N-acetylglucosamine-6-phosphate	N-acetylglucosamine utilization	4	5
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	4
TF	PdxR	Pyridoxal-5-phosphate	Pyridoxine biosynthesis	2	2
TF	TreR	Trehalose-6-phosphate	Trehalose utilization	1	1
TF	UriR	Pyrimidine nucleoside	Nucleoside utilization	1	1
TF	YcjW		Sugar utilization	3	3
TF	YhcF		Multidrug efflux; Multidrug resistance	1	1
TF	YtrA		Multidrug resistance; Multidrug efflux	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	6

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --