# TF - HisR: lin1875
>lin0578(hisZ) Score=6.1 Pos=-55 [Listeria innocua Clip11262]
CACTTTAACGTGCTAATATG
>lin0579(hisJ) Score=6.1 Pos=-116 [Listeria innocua Clip11262]
CATATTAGCACGTTAAAGTG
# TF - YcjW: lin2974
>lin2972(ycjN) Score=5.7 Pos=-78 [Listeria innocua Clip11262]
AACTGGGAGCGATTCCATAA
>lin2973(sucP) Score=6.2 Pos=-32 [Listeria innocua Clip11262]
TTGTGGGAGCGCTCCCGGTT
>lin2974(ycjW) Score=6.2 Pos=-210 [Listeria innocua Clip11262]
AACCGGGAGCGCTCCCACAA
# TF - PdxR: lin2204
>lin2205(pdxS) Score=10.4 Pos=-105 [Listeria innocua Clip11262]
AATTGGATG----------CATCCAATT
>lin2204(pdxR) Score=10.4 Pos=-46 [Listeria innocua Clip11262]
AATTGGATG----------CATCCAATT
# TF - CzrA: lin2636
>lin2636(czrA) Score=6.5 Pos=-42 [Listeria innocua Clip11262]
CATATGAATATATGACCATATA
# TF - NrdR: lin1597
>lin0305(nrdD) Score=4.5 Pos=-61 [Listeria innocua Clip11262]
AAACTTTATCTTGTGT
>lin2259(nrdA) Score=6 Pos=-176 [Listeria innocua Clip11262]
ATACTATATATAGTAT
>lin0305(nrdD) Score=5.4 Pos=-29 [Listeria innocua Clip11262]
ACACAATATATAGTTA
>lin2259(nrdA) Score=4.3 Pos=-338 [Listeria innocua Clip11262]
ACACTATAAGTAGTGG
# TF - CsoR: lin1968
>lin1968(csoR) Score=7.1 Pos=-50 [Listeria innocua Clip11262]
ATACCTATAGGGGGTAT
# TF - YhcF: lin1836
>lin1836(yhcF) Score=6.8 Pos=-49 [Listeria innocua Clip11262]
AGTGTACTATTTACTTAATACACT
# TF - BglR: lin1838
>lin1840(bglX) Score=6.7 Pos=-290 [Listeria innocua Clip11262]
TCATAGAAACGTTTCGACAA
>lin1841(bglA) Score=6.7 Pos=-158 [Listeria innocua Clip11262]
TTGTCGAAACGTTTCTATGA
# TF - Lmo0031: lin0030
>lin0030(lmo0031) Score=7.1 Pos=-92 [Listeria innocua Clip11262]
TTTTGATAACGTTACCAAAT
>lin0030(lmo0031) Score=7.3 Pos=-187 [Listeria innocua Clip11262]
TTTTGGTAACGTTACCAAAT
>lin0031(lmo0032) Score=7.1 Pos=-129 [Listeria innocua Clip11262]
ATTTGGTAACGTTATCAAAA
>lin0031(lmo0032) Score=7.3 Pos=-34 [Listeria innocua Clip11262]
ATTTGGTAACGTTACCAAAA
# TF - BglR2: lin0539
>lin0540(licH) Score=6.8 Pos=-77 [Listeria innocua Clip11262]
ACCTGTAATGCATTACATGA
>lin0539(bglR2) Score=6.8 Pos=-114 [Listeria innocua Clip11262]
TCATGTAATGCATTACAGGT
>lin0288(bglH2) Score=6.5 Pos=-66 [Listeria innocua Clip11262]
ACCTGTAATGCATTACACAA
>lin0017(bglH1) Score=6.6 Pos=-68 [Listeria innocua Clip11262]
CTATGTAATGCATTACATAT
# TF - UriR: lin2102
>lin2101(pdp) Score=7.1 Pos=-89 [Listeria innocua Clip11262]
TTAGTAAAACGGTTTACTTA
# TF - YtrA: lin2343
>lin2343(ytrA) Score=7 Pos=-66 [Listeria innocua Clip11262]
TACTGTACTATTATAACTAGTACAATT
# TF - MdxR: lin2233
>lin2231(mdxD) Score=6.5 Pos=-94 [Listeria innocua Clip11262]
TCTTGTTACCGTTAACGAGC
>lin2230(mdxE) Score=5.9 Pos=-172 [Listeria innocua Clip11262]
TGTTGTTATCGGTAACATGT
# TF - GmuR: lin0584, lin0901
>lin0583(gmuD) Score=4.8 Pos=-63 [Listeria innocua Clip11262]
ATAAGTTTATACTTTT
>lin0900(gmuC) Score=5.8 Pos=-87 [Listeria innocua Clip11262]
AAAAGACTAGACATTT
>lin0901(gmuR1) Score=5.6 Pos=-42 [Listeria innocua Clip11262]
AAATGGCTAGACATTT
>lin2215(manA) Score=4.8 Pos=-62 [Listeria innocua Clip11262]
ATTAGTATATACTTTT
# TF - TreR: lin1221
>lin1223(treP) Score=6.6 Pos=-35 [Listeria innocua Clip11262]
AACTTGTATATACAAGTT
# TF - CcpB: lin2880
>lin2881(lmo2738) Score=6.6 Pos=-47 [Listeria innocua Clip11262]
GAAATTGTCCGGAATATTTT
# TF - BirA: lin2018
>lin0607(bioY) Score=9.3 Pos=-48 [Listeria innocua Clip11262]
ATGTTAAC---------------GTTTACAT
# TF - HrcA: lin1512
>lin2175(groS) Score=7.6 Pos=-65 [Listeria innocua Clip11262]
TTAGCACTCTAATGTGTCGAGTGCTAA
>lin1512(hrcA) Score=7.5 Pos=-41 [Listeria innocua Clip11262]
TTAGCACTTGACGTTATTGAGTGCTAA
# TF - LexA: lin1340
>lin0195(srmB) Score=4.7 Pos=-57 [Listeria innocua Clip11262]
TGATGCGAACGTAGGTTCTGTGTT
>lin2426(int) Score=4.6 Pos=-33 [Listeria innocua Clip11262]
AAAAAAGAACGTATGTGCGAAAGG
>lin1681(lin1681) Score=4.6 Pos=-47 [Listeria innocua Clip11262]
AAAAGGGAACGTATGTTTTATGAT
>lin2632(uvrB) Score=6.1 Pos=-163 [Listeria innocua Clip11262]
GAATACGAAAATATGTTCGGTTTT
>lin1435(recA) Score=6.3 Pos=-142 [Listeria innocua Clip11262]
AAATACGAATAAATGTTCGCTTTT
>lin1340(lexA) Score=6 Pos=-144 [Listeria innocua Clip11262]
AAAAAAGAATGTACGTTCGCTTTT
>lin1340(lexA) Score=5.6 Pos=-84 [Listeria innocua Clip11262]
AAAAACGAACCTTTGTTTGCATAT
>lin1871(pcrA) Score=5.8 Pos=-44 [Listeria innocua Clip11262]
AAATAAGAACAAATGTTTGTATGG
>lin2325(yhaO) Score=5.9 Pos=-42 [Listeria innocua Clip11262]
TAATAAGAACGTATATTCGGTTTT
>lin2369(addB) Score=5.8 Pos=-30 [Listeria innocua Clip11262]
AAATAAAAACATATGTTCGGTGGT
>lin1609(dnaE) Score=5.6 Pos=-75 [Listeria innocua Clip11262]
AAACGCGAACACACTTTCTTTTTT
>lin2822(lmo2675) Score=5.5 Pos=-73 [Listeria innocua Clip11262]
AAACAAGAACGTTTGTTCGTATAA
>lin2082(dinP) Score=5.5 Pos=-38 [Listeria innocua Clip11262]
GAATAAGAACGCTTGTTCGTTTTA
# TF - ArgR: lin1404
>lin2195(argG) Score=4.5 Pos=-114 [Listeria innocua Clip11262]
ATGTATTTTTAATCAT
>lin1633(argC) Score=4.2 Pos=-88 [Listeria innocua Clip11262]
TTAAATATTAATAAAA
>lin2195(argG) Score=4.4 Pos=-50 [Listeria innocua Clip11262]
GTTAATATAAATACAA
>lin2195(argG) Score=4.9 Pos=-30 [Listeria innocua Clip11262]
TTGTATATTTATGAAT
>lin1633(argC) Score=4.5 Pos=-62 [Listeria innocua Clip11262]
CATTATAAATATACAT
# TF - NagR: lin0957
>lin1996(COG3469) Score=5.4 Pos=-123 [Listeria innocua Clip11262]
GAATTGGTCTATATCAATTT
>lin0955(nagA) Score=6 Pos=-39 [Listeria innocua Clip11262]
TAATTGGTATAGACCGATTT
>lin0825(fbp) Score=5 Pos=-95 [Listeria innocua Clip11262]
CTTTTTGTATAGACCAATAA
>lin1606(pfk) Score=4.7 Pos=-203 [Listeria innocua Clip11262]
TCACAAGTATAGACCAATTA
>lin1606(pfk) Score=5.1 Pos=-149 [Listeria innocua Clip11262]
GAAATGGAATAGACCGATAT
# TF - Zur: lin1483
>lin0191(znuA) Score=6.1 Pos=-34 [Listeria innocua Clip11262]
TAAATCGTAATCATTACGAAAAA
>lin0191(znuA) Score=5.9 Pos=-97 [Listeria innocua Clip11262]
CAAATAAGAATGATTACGTTTTA
>lin1779(znuA2) Score=5.3 Pos=-37 [Listeria innocua Clip11262]
TAAACAAGAACAATTTCGATTTA
>lin1779(znuA2) Score=5.9 Pos=-69 [Listeria innocua Clip11262]
TAAATCGTAATTGCTACGATTAG
>lin1485(znuC2) Score=6.2 Pos=-89 [Listeria innocua Clip11262]
TAATTCGAAGTAATTACGATTTA
>lin1995(rpsN2) Score=6.3 Pos=-38 [Listeria innocua Clip11262]
TAAATCGGAATGATTATTATTTA
# TF - Fur: lin2070
>lin1513(COG0635) Score=4.8 Pos=-10 [Listeria innocua Clip11262]
ATTGATAAAAATGATAAAT
>lin0384(efeU) Score=5.9 Pos=-47 [Listeria innocua Clip11262]
TATGATAATGATAATCATT
>lin0384(efeU) Score=6.3 Pos=-41 [Listeria innocua Clip11262]
AATGATAATCATTTTCAAT
>lin0381(lmo0362) Score=6.2 Pos=-46 [Listeria innocua Clip11262]
GTTGATAATGATTATCATT
>lin0381(lmo0362) Score=5.7 Pos=-40 [Listeria innocua Clip11262]
AATGATTATCATTTTCAAC
>lin2290(isdC) Score=5.6 Pos=-131 [Listeria innocua Clip11262]
GTTGACAATGATAATCATT
>lin2290(isdC) Score=6.5 Pos=-125 [Listeria innocua Clip11262]
AATGATAATCATTATCAAT
>lin0487(isdG) Score=4.9 Pos=-84 [Listeria innocua Clip11262]
ATTGACATTGAGAATCATT
>lin0487(isdG) Score=6.3 Pos=-78 [Listeria innocua Clip11262]
ATTGAGAATCATTATCAAT
>lin0545(fepB) Score=5.2 Pos=-42 [Listeria innocua Clip11262]
AACGATAATGAAAATCATT
>lin0545(fepB) Score=6.1 Pos=-36 [Listeria innocua Clip11262]
AATGAAAATCATTTTCAAT
>lin2072(fhuB) Score=6 Pos=-59 [Listeria innocua Clip11262]
ATTGATAATTATTATCACT
>lin2073(fhuA) Score=5.8 Pos=-140 [Listeria innocua Clip11262]
GGTGATAATCATTCTCAAT
>lin2073(fhuA) Score=5.1 Pos=-35 [Listeria innocua Clip11262]
ACTGAGAATTGTTATCAGT
>lin2074(fhuC) Score=5.1 Pos=-149 [Listeria innocua Clip11262]
ACTGATAACAATTCTCAGT
>lin2074(fhuC) Score=5.8 Pos=-44 [Listeria innocua Clip11262]
ATTGAGAATGATTATCACC
>lin2208(feoA) Score=5.7 Pos=-54 [Listeria innocua Clip11262]
GTTGATAATGATTATCATG
>lin2208(feoA) Score=5.3 Pos=-48 [Listeria innocua Clip11262]
AATGATTATCATGTTCACT
>lin2525(fepB2) Score=5.6 Pos=-91 [Listeria innocua Clip11262]
GATGAAAATAATTCTCAAT
>lin2362(lmo2261) Score=5.9 Pos=-66 [Listeria innocua Clip11262]
AATGAAAATCATTCTCATA
>lin2070(fur) Score=5.2 Pos=-93 [Listeria innocua Clip11262]
AATTATAATTATTATAAAC
>lin2070(fur) Score=5.6 Pos=-60 [Listeria innocua Clip11262]
AATGATAATGATGATAATT
>lin0942(dps) Score=4.8 Pos=-35 [Listeria innocua Clip11262]
AGTGATAATCATTACAAAA
>lin2920(katG) Score=5 Pos=-54 [Listeria innocua Clip11262]
TTTAATAATTATTATAATT
>lin0824(porA) Score=5.1 Pos=-46 [Listeria innocua Clip11262]
AATAAGAATGATTATAAAA
# TF - MntR: lin1991
>lin1463(mntH) Score=6.4 Pos=-51 [Listeria innocua Clip11262]
AATGTTTCCCGTAGTAAACTTT
>lin1963(mntB) Score=6.3 Pos=-68 [Listeria innocua Clip11262]
AAAGTTGCATTAAGGAAACATT