Regulon of Fur in Listeria innocua Clip11262

Properties
Regulator type:	Transcription factor
TF locus tag:	lin2070
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Listeriaceae
Statistics of regulated genes:
- Genes	30
- Operons	16
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 91 sites [see more]

Member of regulog collections

By taxonomy - Listeriaceae
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -47 Score: 5.9 Sequence: TATGATAATGATAATCATT Position: -41 Score: 6.3 Sequence: AATGATAATCATTTTCAAT Locus tag: lin0384 Name: efeU Funciton: Ferrous iron transport permease EfeU Locus tag: lin0385 Name: efeO Funciton: Ferrous iron transport periplasmic protein EfeO Locus tag: lin0386 Name: efeB Funciton: Ferrous iron transport peroxidase EfeB
	lin0384	efeU	Ferrous iron transport permease EfeU
	lin0385	efeO	Ferrous iron transport periplasmic protein EfeO
	lin0386	efeB	Ferrous iron transport peroxidase EfeB
Position: -46 Score: 6.2 Sequence: GTTGATAATGATTATCATT Position: -40 Score: 5.7 Sequence: AATGATTATCATTTTCAAC Locus tag: lin0381 Name: lmo0362 Funciton: Twin-arginine translocation protein TatA Locus tag: lin0380 Name: lmo0361 Funciton: Twin-arginine translocation protein TatC
	lin0381	lmo0362	Twin-arginine translocation protein TatA
	lin0380	lmo0361	Twin-arginine translocation protein TatC
Position: -10 Score: 4.8 Sequence: ATTGATAAAAATGATAAAT Locus tag: lin1513 Name: COG0635 Funciton: Oxygen-independent coproporphyrinogen III oxidase, putative
	lin1513	COG0635	Oxygen-independent coproporphyrinogen III oxidase, putative
Position: -131 Score: 5.6 Sequence: GTTGACAATGATAATCATT Position: -125 Score: 6.5 Sequence: AATGATAATCATTATCAAT Locus tag: lin2290 Name: isdC Funciton: Haem uptake protein IsdC Locus tag: lin2289 Name: isdA Funciton: Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC Locus tag: lin2288 Name: isdE Funciton: Heme ABC transporter, haem-binding protein IsdE Locus tag: lin2287 Name: isdF Funciton: Heme ABC transporter, permease component IsdF Locus tag: lin2286 Name: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components Funciton: Heme transporter analogous to IsdDEF, ATP-binding protein Locus tag: lin2285 Name: srtB Funciton: Sortase, SrtB family
	lin2290	isdC	Haem uptake protein IsdC
	lin2289	isdA	Cell surface protein IsdA, transfers heme from hemoglobin to apo-IsdC
	lin2288	isdE	Heme ABC transporter, haem-binding protein IsdE
	lin2287	isdF	Heme ABC transporter, permease component IsdF
	lin2286	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	Heme transporter analogous to IsdDEF, ATP-binding protein
	lin2285	srtB	Sortase, SrtB family
Position: -42 Score: 5.2 Sequence: AACGATAATGAAAATCATT Position: -36 Score: 6.1 Sequence: AATGAAAATCATTTTCAAT Locus tag: lin0545 Name: fepB Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	lin0545	fepB	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Position: -35 Score: 4.8 Sequence: AGTGATAATCATTACAAAA Locus tag: lin0942 Name: dps Funciton: Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
	lin0942	dps	Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
Position: -93 Score: 5.2 Sequence: AATTATAATTATTATAAAC Position: -60 Score: 5.6 Sequence: AATGATAATGATGATAATT Locus tag: lin2070 Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family
	lin2070	fur	Transcriptional regulator for iron transport and metabolism, Fur family
Position: -66 Score: 5.9 Sequence: AATGAAAATCATTCTCATA Locus tag: lin2362 Name: lmo2261 Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly Locus tag: lin2361 Name: lmo2260 Funciton: Acetyltransferase, GNAT family
	lin2362	lmo2261	PaaD-like protein (DUF59) involved in Fe-S cluster assembly
	lin2361	lmo2260	Acetyltransferase, GNAT family
Position: -91 Score: 5.6 Sequence: GATGAAAATAATTCTCAAT Locus tag: lin2525 Name: fepB2 Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) Locus tag: lin2524 Name: fepD2 Funciton: Ferrichrome transport system permease protein (TC 3.A.1.14.3) Locus tag: lin2523 Name: fepC2 Funciton: Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
	lin2525	fepB2	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	lin2524	fepD2	Ferrichrome transport system permease protein (TC 3.A.1.14.3)
	lin2523	fepC2	Ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
Position: -54 Score: 5.7 Sequence: GTTGATAATGATTATCATG Position: -48 Score: 5.3 Sequence: AATGATTATCATGTTCACT Locus tag: lin2208 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: lin2209 Name: feoB Funciton: Ferrous iron transport protein B
	lin2208	feoA	Ferrous iron transport protein A
	lin2209	feoB	Ferrous iron transport protein B
Position: -46 Score: 5.1 Sequence: AATAAGAATGATTATAAAA Locus tag: lin0824 Name: porA Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
	lin0824	porA	Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -149 Score: 5.1 Sequence: ACTGATAACAATTCTCAGT Position: -44 Score: 5.8 Sequence: ATTGAGAATGATTATCACC Locus tag: lin2074 Name: fhuC Funciton: Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3) Locus tag: lin2075 Name: PF07992 Funciton: Thioredoxin reductase (EC 1.8.1.9)
	lin2074	fhuC	Ferrichrome transport ATP-binding protein FhuC (TC 3.A.1.14.3)
	lin2075	PF07992	Thioredoxin reductase (EC 1.8.1.9)
Position: -140 Score: 5.8 Sequence: GGTGATAATCATTCTCAAT Position: -35 Score: 5.1 Sequence: ACTGAGAATTGTTATCAGT Locus tag: lin2073 Name: fhuA Funciton: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
	lin2073	fhuA	Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3)
Position: -84 Score: 4.9 Sequence: ATTGACATTGAGAATCATT Position: -78 Score: 6.3 Sequence: ATTGAGAATCATTATCAAT Locus tag: lin0487 Name: isdG Funciton: Heme-degrading cytoplasmic oxygenase IsdG
	lin0487	isdG	Heme-degrading cytoplasmic oxygenase IsdG
Position: -59 Score: 6 Sequence: ATTGATAATTATTATCACT Locus tag: lin2072 Name: fhuB Funciton: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3) Locus tag: lin2071 Name: fhuG Funciton: Ferrichrome transport system permease protein FhuG
	lin2072	fhuB	Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3)
	lin2071	fhuG	Ferrichrome transport system permease protein FhuG
Position: -54 Score: 5 Sequence: TTTAATAATTATTATAATT Locus tag: lin2920 Name: katG Funciton: Catalase (EC 1.11.1.6)
	lin2920	katG	Catalase (EC 1.11.1.6)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Listeria innocua Clip11262

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --