Regulons of Bradyrhizobium sp. BTAi1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BBta_7471			1	1
TF	BioR		Biotin biosynthesis	2	2
TF	Bll2166			2	2
TF	Bll4368		Glycolate utilization; Lactate utilization	4	5
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	2	1
TF	FixJ	Oxygen	Oxidative stress response	6	2
TF	FnrN/FixK/AadR	Oxygen	Oxidative stress response; Nitrogen fixation	34	22
TF	GulR		Glucarate utilization; Galactarate utilization	5	5
TF	HrcA	Heat shock	Heat shock response	4	3
TF	HutC	cis-Urocanic acid	Histidine utilization	2	2
TF	IdnR	L-idonate	Idonate utilization	2	2
TF	Irr	Heme	Iron homeostasis	20	6
TF	LexA	DNA damage	SOS response	22	11
TF	Mll1683		Sugar utilization	3	3
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	3	2
TF	ModE	Molybdate	Molybdenum homeostasis	1	1
TF	Mur	Iron ion, (Fe2+)	Manganese homeostasis	3	3
TF	NadQ		NAD biosynthesis	2	2
TF	NifA		Nitrogen fixation	20	19
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	5	5
TF	NmlR	Diamide	Carbonyl stress response	1	1
TF	NnrR	Nitric oxide	Denitrification	12	11
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	4
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	10	10
TF	PdxQ3		Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxW	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PhnF		Phosphonate utilization	4	2
TF	PsrA	Oleate	Fatty acid degradation	2	4
TF	RutR	Uracil	Pyrimidine utilization	5	3
TF	SMb20039			1	1
TF	VanR	Vanillate	Vanillate utilization	1	2
TF	XylR	Xylose	Xylose utilization	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	5	4
TF	blr3394		Sugar utilization	1	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	9	3
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	Glycine	Glycine	Glycine metabolism	2	2
RNA	SAM_alpha	S-adenosylmethionine	Methionine biosynthesis	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	1
RNA	serC		Serine biosynthesis	1	1
RNA	ykkC-yxkD		Multidrug resistance	3	1
RNA	yybP-ykoY			1	1

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Bradyrhizobium sp. BTAi1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --