Regulon of RutR in Bradyrhizobium sp. BTAi1

Properties
Regulator type:	Transcription factor
TF locus tag:	BBta_6034
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Pyrimidine utilization
Effector:	Uracil
Regulog:	RutR - Rhizobiales
Statistics of regulated genes:
- Genes	9
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By trascription factor - RutR
By taxonomy - Rhizobiales
By TF family - TetR
By effector - Uracil
By pathway - Pyrimidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -82 Score: 5.6 Sequence: TTTTGATCAACTGGTCAAAT Locus tag: BBta_6036 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: BBta_6035 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
	BBta_6036	pydX	Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
	BBta_6035	pydA	Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
Position: -136 Score: 5.1 Sequence: ATCTGATCAAATGGTCAAAT Locus tag: BBta_6033 Name: pytA Funciton: Pyrimidine ABC transporter ATP-binding protein Locus tag: BBta_6032 Name: pytB Funciton: Pyrimidine ABC transporter, permease protein 1 Locus tag: BBta_6031 Name: pytC Funciton: Pyrimidine ABC transporter, permease protein 2 Locus tag: BBta_6030 Name: pytD Funciton: Pyrimidine ABC transporter, substrate-binding protein Locus tag: BBta_6029 Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) Locus tag: BBta_6028 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
	BBta_6033	pytA	Pyrimidine ABC transporter ATP-binding protein
	BBta_6032	pytB	Pyrimidine ABC transporter, permease protein 1
	BBta_6031	pytC	Pyrimidine ABC transporter, permease protein 2
	BBta_6030	pytD	Pyrimidine ABC transporter, substrate-binding protein
	BBta_6029	pydB	Dihydropyrimidinase (EC 3.5.2.2)
	BBta_6028	pydC	Beta-ureidopropionase (EC 3.5.1.6)
Position: -81 Score: 5.4 Sequence: ATTTGACCATTTGATCAGAT Locus tag: BBta_6034 Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
	BBta_6034	rutR	Transcriptional regulator RutR of pyrimidine catabolism, TetR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD