Profile of regulator RutR in Rhizobiales
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Pyrimidine utilization |
| Effector: |
Uracil |
| Regulog: |
RutR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Sinorhizobium meliloti 1021
|
|
SMc01814 |
pydX |
-71 |
5.8 |
ATTTTACCGTTTGATAAAAA |
|
SMa2361 |
pytM |
-34 |
5.5 |
ATTCTACCAATCGGTAAAAA |
|
SMc01819 |
rutR |
-153 |
5.7 |
ATTTGACCGGTTGGTAAACA |
|
SMc02884 |
pntD |
-157 |
5.4 |
TTTTTACCATCCGAAAAAAT |
|
SMc04127 |
pntA |
-80 |
5.3 |
CTTATACCAAATGGTAAAAA |
|
SMc01820 |
pydC |
-145 |
5.5 |
TGTTTACCAACCGGTCAAAT |
|
Rhizobium sp. NGR234
|
|
NGR_c35400 |
pntD |
-159 |
5.2 |
TTTTTACCATCCGAAAAATT |
|
NGR_b02360 |
pytM |
-62 |
5.3 |
CATTGACCAAGTGGTAAAAA |
|
NGR_c24760 |
pydX |
-70 |
5.8 |
ATTTTACCGTTTGATAAAAA |
|
NGR_c24830 |
pydC |
-147 |
5.5 |
TGTTTACCAACCGGTCAAAT |
|
NGR_c24820 |
rutR |
-153 |
5.7 |
ATTTGACCGGTTGGTAAACA |
|
NGR_c34500 |
pntA |
-78 |
5.3 |
CTTATACCAAATGGTAAAAA |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
pRL90203 |
pytM |
-33 |
5.3 |
TTTGAACCAAATGGTAAAAA |
|
RL3716 |
pydC |
-159 |
5.6 |
TGTTTACCAATCGGTCAAAT |
|
RL3707 |
pydX |
-78 |
5.6 |
ATTTTACCGTTTGATAAATT |
|
RL3715 |
rutR |
-162 |
5.9 |
ATTTGACCGATTGGTAAACA |
|
RL0196 |
pntD |
-155 |
5.1 |
TCTTTACCAGCTGAAAAATT |
|
Rhizobium etli CFN 42
|
|
RHE_CH00187 |
pntD |
-154 |
4.8 |
TCTTTACCGCCTGAAAAATT |
|
RHE_CH03289 |
rutR |
-163 |
5.9 |
ATTTGACCGATTGGTAAACA |
|
RHE_CH03277 |
pydX |
-77 |
5.6 |
ATTTTACCGTTTGATAAATT |
|
RHE_PB00102 |
pytM |
-32 |
5.2 |
TTTGAACCAGATGGTAAAAA |
|
RHE_CH03290 |
pydC |
-156 |
5.6 |
TGTTTACCAATCGGTCAAAT |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu0126 |
pntD |
-164 |
4.7 |
GTTTTTCCACCGGGTCAAAA |
|
Atu2384 |
rutR |
-153 |
5.4 |
AATTGACCGGCTGGTAAACA |
|
Atu3604 |
hpt |
-46 |
5.1 |
TTTTTACTGAAAGGTAAAAT |
|
Atu2500 |
rutA |
-101 |
5.2 |
TTTTATCCATTTGATAAAAT |
|
Atu2500 |
rutA |
-157 |
5.9 |
TTTTTACCAAATGATAAAAA |
|
Atu2385 |
pydC |
-145 |
5.2 |
TGTTTACCAGCCGGTCAATT |
|
Mesorhizobium sp. BNC1
|
|
Meso_3652 |
pntA |
-18 |
5.3 |
TGTTGACCAAAAGATAAAAT |
|
Meso_2057 |
pydX |
-64 |
5.6 |
ATTTGACTGATTGATAAAAA |
|
Meso_2041 |
rutR |
-130 |
5.2 |
TTTTGACCGTTTGGACAATC |
|
Meso_2042 |
praX |
-88 |
4.9 |
GATTGTCCAAACGGTCAAAA |
|
Mesorhizobium loti MAFF303099
|
|
mll1632 |
praX |
-96 |
5.3 |
GTTTGTCCAATCGGTCAAAA |
|
mlr3148 |
pntD |
-165 |
4.7 |
GCTTTTCCAAAAGGTCAAAA |
|
mlr3154 |
pntA |
-41 |
5.6 |
TTTTGACCAAGCGATAAAAA |
|
mll4178 |
pytM |
-99 |
5.5 |
ATTTGACCATGTGGACAAAA |
|
mll1646 |
pydX |
-68 |
5.8 |
AATTGACCAATTGATAAAAA |
|
mlr1634 |
rutR |
-151 |
5.5 |
TTTTGACCGATTGGACAAAC |
|
Brucella melitensis 16M
|
|
BMEI1638 |
pydX |
-158 |
5.5 |
AATTGACCGGATGATAAAAA |
|
BMEI1642 |
rutR |
-90 |
5.3 |
ACTTGACTAGTTGGTCAAAA |
|
BMEI1643 |
pydC |
-148 |
5.1 |
TTTTGACCAACTAGTCAAGT |
|
Bradyrhizobium sp. BTAi1
|
|
BBta_6033 |
pytA |
-136 |
5.1 |
ATCTGATCAAATGGTCAAAT |
|
BBta_6034 |
rutR |
-81 |
5.4 |
ATTTGACCATTTGATCAGAT |
|
BBta_6036 |
pydX |
-82 |
5.6 |
TTTTGATCAACTGGTCAAAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
