Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator RutR in Rhizobiales

Properties
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Regulog: RutR - Rhizobiales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Sinorhizobium meliloti 1021
SMc01814 pydX -71 5.8 ATTTTACCGTTTGATAAAAA
SMa2361 pytM -34 5.5 ATTCTACCAATCGGTAAAAA
SMc01819 rutR -153 5.7 ATTTGACCGGTTGGTAAACA
SMc02884 pntD -157 5.4 TTTTTACCATCCGAAAAAAT
SMc04127 pntA -80 5.3 CTTATACCAAATGGTAAAAA
SMc01820 pydC -145 5.5 TGTTTACCAACCGGTCAAAT
Rhizobium sp. NGR234
NGR_c35400 pntD -159 5.2 TTTTTACCATCCGAAAAATT
NGR_b02360 pytM -62 5.3 CATTGACCAAGTGGTAAAAA
NGR_c24760 pydX -70 5.8 ATTTTACCGTTTGATAAAAA
NGR_c24830 pydC -147 5.5 TGTTTACCAACCGGTCAAAT
NGR_c24820 rutR -153 5.7 ATTTGACCGGTTGGTAAACA
NGR_c34500 pntA -78 5.3 CTTATACCAAATGGTAAAAA
Rhizobium leguminosarum bv. viciae 3841
pRL90203 pytM -33 5.3 TTTGAACCAAATGGTAAAAA
RL3716 pydC -159 5.6 TGTTTACCAATCGGTCAAAT
RL3707 pydX -78 5.6 ATTTTACCGTTTGATAAATT
RL3715 rutR -162 5.9 ATTTGACCGATTGGTAAACA
RL0196 pntD -155 5.1 TCTTTACCAGCTGAAAAATT
Rhizobium etli CFN 42
RHE_CH00187 pntD -154 4.8 TCTTTACCGCCTGAAAAATT
RHE_CH03289 rutR -163 5.9 ATTTGACCGATTGGTAAACA
RHE_CH03277 pydX -77 5.6 ATTTTACCGTTTGATAAATT
RHE_PB00102 pytM -32 5.2 TTTGAACCAGATGGTAAAAA
RHE_CH03290 pydC -156 5.6 TGTTTACCAATCGGTCAAAT
Agrobacterium tumefaciens str. C58 (Cereon)
Atu0126 pntD -164 4.7 GTTTTTCCACCGGGTCAAAA
Atu2384 rutR -153 5.4 AATTGACCGGCTGGTAAACA
Atu3604 hpt -46 5.1 TTTTTACTGAAAGGTAAAAT
Atu2500 rutA -101 5.2 TTTTATCCATTTGATAAAAT
Atu2500 rutA -157 5.9 TTTTTACCAAATGATAAAAA
Atu2385 pydC -145 5.2 TGTTTACCAGCCGGTCAATT
Mesorhizobium sp. BNC1
Meso_3652 pntA -18 5.3 TGTTGACCAAAAGATAAAAT
Meso_2057 pydX -64 5.6 ATTTGACTGATTGATAAAAA
Meso_2041 rutR -130 5.2 TTTTGACCGTTTGGACAATC
Meso_2042 praX -88 4.9 GATTGTCCAAACGGTCAAAA
Mesorhizobium loti MAFF303099
mll1632 praX -96 5.3 GTTTGTCCAATCGGTCAAAA
mlr3148 pntD -165 4.7 GCTTTTCCAAAAGGTCAAAA
mlr3154 pntA -41 5.6 TTTTGACCAAGCGATAAAAA
mll4178 pytM -99 5.5 ATTTGACCATGTGGACAAAA
mll1646 pydX -68 5.8 AATTGACCAATTGATAAAAA
mlr1634 rutR -151 5.5 TTTTGACCGATTGGACAAAC
Brucella melitensis 16M
BMEI1638 pydX -158 5.5 AATTGACCGGATGATAAAAA
BMEI1642 rutR -90 5.3 ACTTGACTAGTTGGTCAAAA
BMEI1643 pydC -148 5.1 TTTTGACCAACTAGTCAAGT
Bradyrhizobium sp. BTAi1
BBta_6033 pytA -136 5.1 ATCTGATCAAATGGTCAAAT
BBta_6034 rutR -81 5.4 ATTTGACCATTTGATCAGAT
BBta_6036 pydX -82 5.6 TTTTGATCAACTGGTCAAAT
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