Regulon of LexA in Bradyrhizobium sp. BTAi1
| Regulator type: | Transcription factor |
| TF locus tag: | BBta_4496 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -124
Score: 5.2 Sequence: GTTCATGATTTGTTT
Locus tag: BBta_4496
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -108
Score: 4.8 Sequence: GTTCTTCCTACGTTC
Locus tag: BBta_4379
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -98
Score: 4.9 Sequence: GTTCTTGTAATGTTC
Locus tag: BBta_2341
Name: PF04055 Funciton: Radical SAM domain protein |
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PF04055
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Radical SAM domain protein
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Position: -107
Score: 1.6 Sequence: GAACATATTGCGAAC
Position: -89
Score: 1 Sequence: GAACAGATCGGGTAC
Locus tag: BBta_5453
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -57
Score: 4.9 Sequence: GTTCTTGAAATGTTC
Locus tag: BBta_1732
Name: rna Funciton: Ribonuclease T2 |
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rna
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Ribonuclease T2
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Position: -96
Score: 1.7 Sequence: GAACGTATCATGAAC
Locus tag: BBta_2985
Name: imuA Funciton: Predicted RecA/RadA recombinase
Locus tag: BBta_2986
Name: imuB Funciton: DNA polymerase-like protein PA0670
Locus tag: BBta_2987
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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imuA
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Predicted RecA/RadA recombinase
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imuB
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DNA polymerase-like protein PA0670
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -47
Score: 4.6 Sequence: GTTCCGTTTATGTTT
Locus tag: BBta_6909
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: BBta_6908
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: BBta_6907
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: BBta_6906
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvC
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Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
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ruvA
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Holliday junction DNA helicase RuvA
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cdd
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Cytidine deaminase (EC 3.5.4.5)
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -62
Score: 5.1 Sequence: GTTCTTGCATTGTTC
Locus tag: BBta_0136
Name: yifB Funciton: Conserved hypothetical protein |
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yifB
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Conserved hypothetical protein
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Position: -47
Score: 5.1 Sequence: GTTCTCTATTCGTTC
Locus tag: BBta_7338
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -174
Score: 1.2 Sequence: GAACAAAACTGGAAC
Locus tag: BBta_4373
Name: ssb Funciton: Single-stranded DNA-binding protein |
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ssb
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Single-stranded DNA-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |