Regulog CcpA - Clostridia-1
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbohydrate metabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - CcpA
- By taxonomy - Clostridia-1
- By TF family - LacI
- By effector - HPr, phosphocarrier protein
- By pathway - Carbohydrate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Clostridium acetobutylicum ATCC 824 | 161 | 92 |
| Clostridium beijerincki NCIMB 8052 | 135 | 74 |
| Clostridium botulinum A str. ATCC 3502 | 51 | 40 |
| Clostridium butyricum 5521 | 129 | 54 |
| Clostridium kluyveri DSM 555 | 30 | 13 |
| Clostridium novyi NT | 32 | 21 |
| Clostridium perfringens ATCC 13124 | 52 | 28 |
| Clostridium tetani E88 | 35 | 20 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| fruA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -51 score = 4.90319 sequence = TTGAAAACGTTTTTAT Gene: CAC1462: Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65) |
|
|
|
|
|
|
|
Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65) |
| CRON 2. | |||||||||
| manB |
*
Clostridium acetobutylicum ATCC 824 Site: position = -158 score = 4.77124 sequence = TTGTAAACGTTTTTAT Gene: CAC0332: Beta-mannanase (EC 3.2.1.78) |
|
|
|
|
|
|
|
Beta-mannanase (EC 3.2.1.78) |
| CRON 3. | |||||||||
| CAC0164 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -38 score = 4.35465 sequence = TTGAAAACGCTATCAT Gene: CAC0164: ABC transporter, ATP binding-protein |
|
|
|
|
|
|
|
ABC transporter, ATP binding-protein |
| CAC0165 |
Gene: CAC0165: ABC transporter permease protein |
|
|
|
|
|
|
|
ABC transporter permease protein |
| CRON 4. | |||||||||
| glnN |
*
Clostridium acetobutylicum ATCC 824 Site: position = -157 score = 4.52548 sequence = TAGTAAACGTTTTCTT Site: position = -202 score = 4.64591 sequence = ATGAAAAAATTTACAA Gene: CAC2658: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -70 score = 3.9648 sequence = TTATTAATGTTTTTAA Gene: Cbei_0444: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
|
Gene: CBY_1367: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
|
|
|
|
Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
| CRON 5. | |||||||||
| ganA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -56 score = 4.583 sequence = TAGAAAACGATTTCTT Gene: CAC2570: Arabinogalactan endo-1,4-beta-galactosidase |
|
|
|
|
|
|
|
Arabinogalactan endo-1,4-beta-galactosidase |
| CRON 6. | |||||||||
| CAC0358 |
*
Clostridium acetobutylicum ATCC 824 Site: position = 3 score = 4.16244 sequence = AATAAAATTTTTAAAT Gene: CAC0358: Predicted polysaccharide deacetylase |
|
|
Gene: CBY_0241: Predicted polysaccharide deacetylase |
|
|
|
|
Predicted polysaccharide deacetylase |
| CAC0357 |
Gene: CAC0357: Permease of the Na:galactoside symporter family |
|
|
*
Clostridium butyricum 5521 Site: position = -52 score = 3.89036 sequence = AAATAAATAATTTTAT Gene: CBY_0240: Permease of the Na:galactoside symporter family |
|
|
|
|
Permease of the Na:galactoside symporter family |
| CAC0356 |
Gene: CAC0356: Conserved hypothetical protein |
*
Clostridium beijerincki NCIMB 8052 Site: position = -172 score = 4.0915 sequence = TAGATAATGTTTTTTA Gene: Cbei_3239: Conserved hypothetical protein |
|
*2
Clostridium butyricum 5521 Site: position = -54 score = 4.39776 sequence = ATGTAAATAATTACAA Gene: CBY_0242: Conserved hypothetical protein Gene: CBY_3290: Conserved hypothetical protein |
|
*
Clostridium novyi NT Site: position = 46 score = 3.99957 sequence = TTGTTAAAGCTTTAAA Gene: NT01CX_1623: Conserved hypothetical protein |
|
|
Conserved hypothetical protein |
| pgl |
Gene: CAC0355: Polygalacturonase (EC 3.2.1.15) |
|
|
|
|
|
|
|
Polygalacturonase (EC 3.2.1.15) |
| CBY_0239 |
|
|
|
Gene: CBY_0239: Glycoside hydrolase |
|
|
|
|
Glycoside hydrolase |
| CRON 7. | |||||||||
| gluA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -50 score = 4.74713 sequence = TTGTAAATGTTTTCAT Gene: CAC1075: Periplasmic beta-glucosidase family protein |
|
|
|
|
|
|
|
Periplasmic beta-glucosidase family protein |
| CRON 8. | |||||||||
| mutT1 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -94 score = 3.92021 sequence = ATATTAAAATTTTCAA Site: position = -70 score = 4.63573 sequence = AAGAAAACGATTATAT Gene: CAC2828: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -132 score = 4.32278 sequence = TTTAAAAATATTTAAT Gene: Cbei_2775: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
*2
Clostridium botulinum A str. ATCC 3502 Site: position = -42 score = 3.92782 sequence = AAAAAAATTATTTTAT Gene: CBO2085: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) Gene: CBO0653: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
|
|
Gene: NT01CX_2016: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
Gene: CPF_1031: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
Gene: CTC01909: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) |
| CAC2827 |
Gene: CAC2827: Predicted S-adenosylmethionine-dependent methyltransferase |
|
|
|
|
|
|
|
Predicted S-adenosylmethionine-dependent methyltransferase |
| CRON 9. | |||||||||
| pelL2 |
*2
Clostridium acetobutylicum ATCC 824 Site: position = -129 score = 3.97239 sequence = AATAAAAAGTTTTACA Site: position = -44 score = 4.36523 sequence = ATGTTAACGTTAACAT Gene: CAP0056: Pectate lyase, secreted, polysaccharide lyase family Site: position = -47 score = 4.30896 sequence = TAGTAAAAGATTTTTT Gene: CAC1968: Pectate lyase, secreted, polysaccharide lyase family |
|
|
*
Clostridium butyricum 5521 Site: position = -115 score = 4.38828 sequence = AAGAAAATATTTACAA Site: position = -41 score = 4.15923 sequence = TTGTTAACGATAACAA Gene: CBY_3715: Pectate lyase, secreted, polysaccharide lyase family |
|
|
|
|
Pectate lyase, secreted, polysaccharide lyase family |
| CRON 10. | |||||||||
| CKL_1779 |
|
|
|
|
*
Clostridium kluyveri DSM 555 Site: position = -32 score = 4.03998 sequence = AAGATAAAATTTATAA Gene: CKL_1779: Predicted glycogen synthase (EC 2.4.1.11) |
*
Clostridium novyi NT Site: position = -65 score = 4.07311 sequence = TTGAAAATAAATTTAT Gene: NT01CX_0100: Predicted glycogen synthase (EC 2.4.1.11) |
|
|
Predicted glycogen synthase (EC 2.4.1.11) |
| mpg |
*
Clostridium acetobutylicum ATCC 824 Site: position = -124 score = 4.59555 sequence = ATGTAAACGTTAATAT Gene: CAC2981: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8) |
|
|
|
2
Clostridium kluyveri DSM 555 Gene: CKL_1778: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8) Gene: CKL_0995: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8) |
Gene: NT01CX_0099: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8) |
|
|
Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8) |
| CRON 11. | |||||||||
| CAC0421 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -137 score = 4.50665 sequence = ATGATAACATTTTCAT Gene: CAC0421: Predicted membrane protein |
|
|
|
|
|
|
Gene: CTC01324: Predicted membrane protein |
Predicted membrane protein |
| CRON 12. | |||||||||
| lacB |
*
Clostridium acetobutylicum ATCC 824 Site: position = -63 score = 4.32007 sequence = TATAAAAAGTTTTATA Gene: CAC2514: Probable beta-galactosidase B (EC 3.2.1.23) |
|
|
|
|
|
|
|
Probable beta-galactosidase B (EC 3.2.1.23) |
| CRON 13. | |||||||||
| solR |
*
Clostridium acetobutylicum ATCC 824 Site: position = -170 score = 4.64742 sequence = TTGAAAACATTTTCTT Gene: CAP0161: Transcription regulator of butanol and acetone formation |
|
|
|
|
|
|
|
Transcription regulator of butanol and acetone formation |
| CRON 14. | |||||||||
| lipG |
*
Clostridium acetobutylicum ATCC 824 Site: position = -189 score = 4.40504 sequence = ATTAAAAAAATTTAAA Gene: CAP0097: Putative hydrolase |
Gene: Cbei_3238: Putative hydrolase |
|
|
|
|
|
|
Putative hydrolase |
| ipyR |
Gene: CAP0096: Inorganic pyrophosphatase |
|
|
|
|
|
|
|
Inorganic pyrophosphatase |
| CRON 15. | |||||||||
| xylT |
*
Clostridium acetobutylicum ATCC 824 Site: position = -61 score = 4.56569 sequence = ATGAAATCGTTTAAAA Site: position = -79 score = 3.96017 sequence = TATAAAAATTTATCAT Gene: CAC1345: Arabinose-proton symporter |
|
|
|
|
|
|
|
Arabinose-proton symporter |
| araA |
2
Clostridium acetobutylicum ATCC 824 Gene: CAC1346: L-arabinose isomerase (EC 5.3.1.4) Gene: CAC1342: L-arabinose isomerase (EC 5.3.1.4) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -192 score = 3.94661 sequence = ATGAAAAGGTATACTA Gene: Cbei_4457: L-arabinose isomerase (EC 5.3.1.4) |
|
|
|
|
|
|
L-arabinose isomerase (EC 5.3.1.4) |
| tal |
Gene: CAC1347: Transaldolase (EC 2.2.1.2) |
*3
Clostridium beijerincki NCIMB 8052 Site: position = -117 score = 4.01594 sequence = AAGAAAATGTCTAAAT Gene: Cbei_4454: Transaldolase (EC 2.2.1.2) Site: position = -43 score = 3.96942 sequence = TATTAAATGATTTTTA Site: position = -112 score = 4.00785 sequence = AAATAAATATTTACAT Gene: Cbei_2386: Transaldolase (EC 2.2.1.2) Gene: Cbei_4645: Transaldolase (EC 2.2.1.2) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -175 score = 3.96979 sequence = GAGAAAACGTTATAAA Site: position = -219 score = 4.08529 sequence = ATAAAAATTTTAAAAT Gene: CBO1292: Transaldolase (EC 2.2.1.2) |
2
Clostridium butyricum 5521 Gene: CBY_2344: Transaldolase (EC 2.2.1.2) Gene: CBY_3805: Transaldolase (EC 2.2.1.2) |
Gene: CKL_0998: Transaldolase (EC 2.2.1.2) |
Gene: NT01CX_0748: Transaldolase (EC 2.2.1.2) |
*
Clostridium perfringens ATCC 13124 Site: position = -128 score = 4.19603 sequence = ATGTAAACTTTAAATA Site: position = -232 score = 4.13561 sequence = ATGATAAAGGTTACAT Gene: CPF_0684: Transaldolase (EC 2.2.1.2) |
*
Clostridium tetani E88 Site: position = -78 score = 3.94774 sequence = TTTAAATTAATTAAAT Site: position = -162 score = 3.90469 sequence = GTGTAAAAATTTACAA Site: position = -32 score = 3.91601 sequence = TTATAATAGATTTATT Gene: CTC00228: Transaldolase (EC 2.2.1.2) |
Transaldolase (EC 2.2.1.2) |
| tkt |
2
Clostridium acetobutylicum ATCC 824 Gene: CAC0944: Transketolase (EC 2.2.1.1) Gene: CAC1348: Transketolase (EC 2.2.1.1) |
4
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0532: Transketolase (EC 2.2.1.1) Gene: Cbei_4453: Transketolase (EC 2.2.1.1) Gene: Cbei_2387: Transketolase (EC 2.2.1.1) Gene: Cbei_4644: Transketolase (EC 2.2.1.1) |
|
*2
Clostridium butyricum 5521 Site: position = -42 score = 3.9149 sequence = TGGAAAACATTTGAAT Site: position = -59 score = 3.92452 sequence = ATGATTAAGATTTTAA Site: position = -76 score = 4.12631 sequence = ATGAATAAATTTACAA Gene: CBY_2438: Transketolase (EC 2.2.1.1) Gene: CBY_2345: Transketolase (EC 2.2.1.1) |
|
|
|
Gene: CTC01332: Transketolase (EC 2.2.1.1) |
Transketolase (EC 2.2.1.1) |
| galM |
Gene: CAC1349: L-arabinose-specific 1-epimerase (mutarotase) |
|
|
|
|
|
|
|
L-arabinose-specific 1-epimerase (mutarotase) |
| ulaE |
|
|
|
*
Clostridium butyricum 5521 Site: position = -66 score = 4.01903 sequence = TATAAAAAGTTATTTA Gene: CBY_3808: L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22) |
|
|
|
|
L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22) |
| tkt2 |
|
|
|
2
Clostridium butyricum 5521 Gene: CBY_3381: Putative transketolase Gene: CBY_3807: Putative transketolase |
|
|
|
|
Putative transketolase |
| tkt3 |
|
|
|
2
Clostridium butyricum 5521 Gene: CBY_3382: Transketolase Gene: CBY_3806: Transketolase |
|
|
|
|
Transketolase |
| rpe |
|
|
|
Gene: CBY_3804: Ribulose-phosphate 3-epimerase (EC 5.1.3.1) |
|
|
|
|
Ribulose-phosphate 3-epimerase (EC 5.1.3.1) |
| xylB |
*
Clostridium acetobutylicum ATCC 824 Site: position = -104 score = 4.87179 sequence = ATGAAAAAGTTTACAA Site: position = -35 score = 4.2349 sequence = TTTAAAAAGTTATTTA Gene: CAC2612: Xylulose kinase (EC 2.7.1.17) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -152 score = 4.44107 sequence = ATGAAAATGTATTCAA Site: position = -83 score = 4.2349 sequence = TTTAAAAAGTTATTTA Gene: Cbei_2384: Xylulose kinase (EC 2.7.1.17) |
|
*
Clostridium butyricum 5521 Site: position = -34 score = 4.5513 sequence = TTGTAAATGTTTAATA Site: position = -57 score = 4.47884 sequence = TTAAAAATGTTTTTAT Site: position = -77 score = 3.93322 sequence = TTTAAAAAGAATTTTA Gene: CBY_2342: Xylulose kinase (EC 2.7.1.17) |
|
|
|
|
Xylulose kinase (EC 2.7.1.17) |
| xylR |
*
Clostridium acetobutylicum ATCC 824 Site: position = -122 score = 4.07616 sequence = AAGAAAAAATATACAT Gene: CAC3673: Transcription repressor of xylose utilization, ROK family |
Gene: Cbei_2385: Transcription repressor of xylose utilization, ROK family |
|
*2
Clostridium butyricum 5521 Gene: CBY_2343: Transcription repressor of xylose utilization, ROK family Site: position = -95 score = 3.96804 sequence = AATAAAAATATATAAT Gene: CBY_2431: Transcription repressor of xylose utilization, ROK family |
|
|
|
|
Transcription repressor of xylose utilization, ROK family |
| CAC2611 |
Gene: CAC2611: Hypothetical protein |
*
Clostridium beijerincki NCIMB 8052 Site: position = -145 score = 4.2558 sequence = TTATAAAAGTTAAAAT Gene: Cbei_2388: Hypothetical protein |
|
*
Clostridium butyricum 5521 Site: position = -72 score = 4.07956 sequence = TTTAAAAAGTATTTTT Site: position = -42 score = 4.17167 sequence = TATAAAACTTTTTAAA Gene: CBY_2380: Hypothetical protein |
|
|
|
|
Hypothetical protein |
| CAC2610 |
Gene: CAC2610: Predicted xylose isomerase |
*2
Clostridium beijerincki NCIMB 8052 Site: position = -126 score = 4.20939 sequence = ATAAAAATTATTAAAT Site: position = -171 score = 3.94611 sequence = TTGATAATAATAAATT Gene: Cbei_2389: Predicted xylose isomerase Site: position = -42 score = 4.32074 sequence = ATTATAAAGATTTAAA Site: position = -244 score = 4.3068 sequence = TTTAAAAAGTTATTTT Gene: Cbei_4681: Predicted xylose isomerase |
|
Gene: CBY_2379: Predicted xylose isomerase |
|
|
|
|
Predicted xylose isomerase |
| cca |
|
|
|
|
|
*
Clostridium novyi NT Site: position = -30 score = 3.988 sequence = TTAAAAATTATATAAT Site: position = -131 score = 4.21783 sequence = AAGAAAAATTTTATTT Gene: NT01CX_0749: tRNA nucleotidyltransferase, CC-adding (EC 2.7.7.21) |
|
|
tRNA nucleotidyltransferase, CC-adding (EC 2.7.7.21) |
| araD |
*
Clostridium acetobutylicum ATCC 824 Site: position = -157 score = 3.85965 sequence = TAGAAAAAGAAAACTT Site: position = -105 score = 3.97372 sequence = TGGTAAACGTTTTACT Gene: CAC1341: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
|
|
|
|
|
|
|
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) |
| CRON 16. | |||||||||
| CAC0383 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -153 score = 4.02614 sequence = ACTAAAATGTTTACAT Gene: CAC0383: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
*3
Clostridium beijerincki NCIMB 8052 Site: position = -162 score = 4.69209 sequence = TTGTAAACGTTTTATA Gene: Cbei_4636: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) Gene: Cbei_4685: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) Site: position = -176 score = 4.0632 sequence = CTGAAAATATTTTTAA Site: position = -46 score = 4.84097 sequence = TTGAAAAAGTTTTTAT Gene: Cbei_1475: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
Gene: CBY_3764: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
| Cbei_0758 |
Gene: CAC0384: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
3
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4635: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) Gene: Cbei_4684: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) Gene: Cbei_1476: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
|
|
|
|
|
|
PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
| bglC |
Gene: CAC0385: Beta-glucosidase (EC 3.2.1.21) |
Gene: Cbei_1477: Beta-glucosidase (EC 3.2.1.21) |
|
Gene: CBY_2069: Beta-glucosidase (EC 3.2.1.21) |
|
|
|
|
Beta-glucosidase (EC 3.2.1.21) |
| Cbei_4683 |
Gene: CAC0386: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
*3
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4634: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) Gene: Cbei_1478: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) Site: position = -83 score = 4.06662 sequence = ATATAAAAGATAATAA Gene: Cbei_4683: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
|
*
Clostridium butyricum 5521 Site: position = -157 score = 4.63103 sequence = AAGAAAACGTTTAATA Gene: CBY_2072: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
|
|
|
|
PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
| Cbei_4468 |
|
Gene: Cbei_4468: Transcriptional regulator, GntR family |
|
Gene: CBY_2071: Transcriptional regulator, GntR family |
|
|
|
|
Transcriptional regulator, GntR family |
| CRON 17. | |||||||||
| CAC0532 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -202 score = 4.42144 sequence = TTGAAAAGGTTTTCTT Gene: CAC0532: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -51 score = 4.39321 sequence = ATGATAATGTTAACAT Gene: Cbei_4705: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69) |
|
Gene: CBY_0423: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69) |
|
|
|
|
PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69) |
| glvA |
Gene: CAC0533: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -42 score = 4.10393 sequence = ATGAAAATAAATACAA Gene: CBO0278: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
|
|
|
|
|
Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
| CRON 18. | |||||||||
| CAP0160 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -170 score = 4.65098 sequence = AAGAAAATGTTTTCAA Gene: CAP0160: Predicted cell-surface chitinase |
|
|
|
|
|
|
|
Predicted cell-surface chitinase |
| CRON 19. | |||||||||
| CAC3280 |
*9
Clostridium acetobutylicum ATCC 824 Site: position = -107 score = 4.13831 sequence = ATTTAAACTATTTTAA Site: position = -87 score = 3.99576 sequence = ATTAAATCTTTTTCTT Gene: CAC3275: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Site: position = -104 score = 3.94532 sequence = ATTTAAATTTTAATAT Gene: CAC3274: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Site: position = -167 score = 4.43602 sequence = ATGAATACGTTTTATT Gene: CAP0002: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Site: position = -48 score = 4.57652 sequence = AAGAAAACGATATAAT Gene: CAP0003: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Gene: CAC3278: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Site: position = -131 score = 3.96939 sequence = AAGTAATCTTTTAAAT Gene: CAC3279: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Gene: CAC3280: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Site: position = -75 score = 4.34323 sequence = ATAAAAATATTTTAAA Gene: CAC3272: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats Site: position = -114 score = 4.0749 sequence = ATGTAAATCTTTAAAA Gene: CAC3273: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats |
|
|
|
|
|
|
|
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats |
| CRON 20. | |||||||||
| lrgA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -119 score = 4.24141 sequence = ATGTAATCGTTATTAT Site: position = -150 score = 3.89784 sequence = AATTAAAATTTTATAA Gene: CAC0612: Antiholin-like protein LrgA |
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_0936: Antiholin-like protein LrgA Gene: Cbei_5007: Antiholin-like protein LrgA |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -63 score = 4.30693 sequence = ATGAAAAAGTAATAAA Gene: CBO0324: Antiholin-like protein LrgA |
*
Clostridium butyricum 5521 Site: position = -80 score = 4.61088 sequence = ATAAAAAAGTTTTAAA Gene: CBY_0413: Antiholin-like protein LrgA |
*2
Clostridium kluyveri DSM 555 Site: position = -217 score = 4.31795 sequence = AAGTAAATGATATCAT Gene: CKL_2031: Antiholin-like protein LrgA Gene: CKL_2526: Antiholin-like protein LrgA |
*
Clostridium novyi NT Site: position = -140 score = 4.184 sequence = AATAAAATATTTTATT Gene: NT01CX_0754: Antiholin-like protein LrgA |
Gene: CPF_2235: Antiholin-like protein LrgA |
Gene: CTC01825: Antiholin-like protein LrgA |
Antiholin-like protein LrgA |
| lrgB |
Gene: CAC0611: LrgA-associated membrane protein LrgB |
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_5006: LrgA-associated membrane protein LrgB Gene: Cbei_0937: LrgA-associated membrane protein LrgB |
Gene: CBO0325: LrgA-associated membrane protein LrgB |
Gene: CBY_0412: LrgA-associated membrane protein LrgB |
2
Clostridium kluyveri DSM 555 Gene: CKL_2030: LrgA-associated membrane protein LrgB Gene: CKL_2525: LrgA-associated membrane protein LrgB |
Gene: NT01CX_0755: LrgA-associated membrane protein LrgB |
Gene: CPF_2236: LrgA-associated membrane protein LrgB |
Gene: CTC01826: LrgA-associated membrane protein LrgB |
LrgA-associated membrane protein LrgB |
| CAC0610 |
Gene: CAC0610: Hypothetical protein |
Gene: Cbei_5005: Hypothetical protein |
|
Gene: CBY_0411: Hypothetical protein |
|
|
|
|
Hypothetical protein |
| Cbei_5004 |
|
Gene: Cbei_5004: Transcriptional regulator, GntR family |
|
Gene: CBY_0410: Transcriptional regulator, GntR family |
Gene: CKL_2524: Transcriptional regulator, GntR family |
|
|
|
Transcriptional regulator, GntR family |
| CRON 21. | |||||||||
| gntR |
*
Clostridium acetobutylicum ATCC 824 Site: position = -61 score = 4.38875 sequence = ATGAAATCGATTATAA Gene: CAC2851: Transcriptional regulator, GntR family |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -122 score = 4.02037 sequence = TAAAAAATGTTAAATT Gene: CBO0513: Transcriptional regulator, GntR family |
|
Gene: CKL_2798: Transcriptional regulator, GntR family |
|
|
Gene: CTC00893: Transcriptional regulator, GntR family |
Transcriptional regulator, GntR family |
| CRON 22. | |||||||||
| CAC2689 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -148 score = 4.42836 sequence = ATGAAAACGTATATAA Gene: CAC2689: Hypothetical protein |
*
Clostridium beijerincki NCIMB 8052 Site: position = -29 score = 4.28045 sequence = ATGATAACAATTTTAA Gene: Cbei_1222: Hypothetical protein |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -106 score = 3.89975 sequence = CTGAAAATATTAATAT Gene: CBO1767: Hypothetical protein |
|
Gene: CKL_2431: Hypothetical protein |
|
|
|
Hypothetical protein |
| CRON 23. | |||||||||
| spoIVB |
Gene: CAC2072: Stage IV sporulation protein B |
Gene: Cbei_1711: Stage IV sporulation protein B |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -168 score = 4.39129 sequence = ATGTAAATATTTTTTT Gene: CBO1873: Stage IV sporulation protein B |
Gene: CBY_0610: Stage IV sporulation protein B |
Gene: CKL_1236: Stage IV sporulation protein B |
Gene: NT01CX_1988: Stage IV sporulation protein B |
Gene: CPF_2068: Stage IV sporulation protein B |
*
Clostridium tetani E88 Site: position = -78 score = 4.65783 sequence = ATGAAAACATTTTATA Gene: CTC01570: Stage IV sporulation protein B |
Stage IV sporulation protein B |
| CRON 24. | |||||||||
| lacR |
*3
Clostridium acetobutylicum ATCC 824 Site: position = -86 score = 4.11227 sequence = TTGAAAATGATACTAT Gene: CAC2955: Lactose phosphotransferase system repressor lacR Gene: CAC2950: Lactose phosphotransferase system repressor lacR Site: position = -134 score = 4.1033 sequence = ATGTAAACGAAAACAA Site: position = -77 score = 4.27574 sequence = TAGAAAACGATAACTA Gene: CAC2966: Lactose phosphotransferase system repressor lacR |
|
|
*
Clostridium butyricum 5521 Site: position = -77 score = 4.20034 sequence = ATATTAACGTTTTTAT Gene: CBY_2984: Lactose phosphotransferase system repressor lacR |
|
|
|
|
Lactose phosphotransferase system repressor lacR |
| CBY_2985 |
|
|
|
*
Clostridium butyricum 5521 Site: position = -73 score = 3.92922 sequence = AAGTAAAAAAATTAAT Gene: CBY_2985: PTS system, putative lactose-specific IIBC component (EC 2.7.1.69) |
|
|
|
|
PTS system, putative lactose-specific IIBC component (EC 2.7.1.69) |
| CBY_2986 |
|
|
|
Gene: CBY_2986: PTS system, putative lactose-specific IIB component (EC 2.7.1.69) |
|
|
|
|
PTS system, putative lactose-specific IIB component (EC 2.7.1.69) |
| CBY_2987 |
|
|
|
Gene: CBY_2987: PTS system, putative lactose-specific IIC component (EC 2.7.1.69) |
|
|
|
|
PTS system, putative lactose-specific IIC component (EC 2.7.1.69) |
| lacA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -38 score = 4.355 sequence = AAGTAAAAAATTTAAT Gene: CAC2954: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26) |
|
|
Gene: CBY_2988: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26) |
|
|
|
|
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26) |
| lacB |
Gene: CAC2953: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26) |
|
|
Gene: CBY_2989: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26) |
|
|
|
|
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26) |
| agaY |
Gene: CAC2952: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -154 score = 3.95786 sequence = TTAAAAAATATATAAA Gene: CBO0193: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
Gene: CBY_2990: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
Gene: CKL_3599: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
*2
Clostridium novyi NT Gene: NT01CX_0290: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) Site: position = -156 score = 4.20501 sequence = TTTAAAAAAATTTTTT Gene: NT01CX_1380: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
|
Gene: CTC00341: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) |
| lacC |
Gene: CAC2951: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
|
|
Gene: CBY_2991: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
|
Gene: NT01CX_0289: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
|
|
Tagatose-6-phosphate kinase (EC 2.7.1.144) |
| agaS |
|
|
|
|
|
*
Clostridium novyi NT Site: position = -75 score = 4.12843 sequence = ATAAAAATAATTTTTT Gene: NT01CX_0292: Galactosamine-6-phosphate isomerase |
|
|
Galactosamine-6-phosphate isomerase |
| nagA |
|
|
|
|
|
Gene: NT01CX_0291: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
|
|
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| galM |
|
|
|
Gene: CBY_2992: Predicted galactose mutarotase |
|
Gene: NT01CX_0288: Predicted galactose mutarotase |
|
|
Predicted galactose mutarotase |
| lacF |
*
Clostridium acetobutylicum ATCC 824 Site: position = -32 score = 4.1743 sequence = ATAAAAATTATTTAAA Gene: CAC2965: PTS system, lactose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, lactose-specific IIA component (EC 2.7.1.69) |
| lacE |
Gene: CAC2964: PTS system, lactose-specific IIBC component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, lactose-specific IIBC component (EC 2.7.1.69) |
| lacG |
Gene: CAC2963: 6-phospho-beta-galactosidase (EC 3.2.1.85) |
|
|
|
|
|
|
|
6-phospho-beta-galactosidase (EC 3.2.1.85) |
| CRON 25. | |||||||||
| araE |
*
Clostridium acetobutylicum ATCC 824 Site: position = -91 score = 4.68518 sequence = ATGAAAACGTTATATA Gene: CAC1339: Arabinose-proton symporter |
|
|
|
|
|
|
|
Arabinose-proton symporter |
| CRON 26. | |||||||||
| msmE |
*
Clostridium acetobutylicum ATCC 824 Site: position = -45 score = 4.85898 sequence = ATGTAAACGATTTAAT Gene: CAC3672: Multiple sugar ABC transporter, substrate-binding protein MsmE |
|
|
|
|
|
|
|
Multiple sugar ABC transporter, substrate-binding protein MsmE |
| msmF |
Gene: CAC3671: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF |
Gene: Cbei_0733: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF |
|
|
|
|
|
|
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF |
| msmG |
Gene: CAC3670: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG |
Gene: Cbei_0734: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG |
|
|
|
|
|
|
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG |
| CRON 27. | |||||||||
| serB |
*
Clostridium acetobutylicum ATCC 824 Site: position = -66 score = 3.94817 sequence = ATAATAAAATTATAAT Gene: CAC0263: Phosphoserine phosphatase (EC 3.1.3.3) |
Gene: Cbei_1022: Phosphoserine phosphatase (EC 3.1.3.3) |
Gene: CBO1079: Phosphoserine phosphatase (EC 3.1.3.3) |
Gene: CBY_2747: Phosphoserine phosphatase (EC 3.1.3.3) |
*
Clostridium kluyveri DSM 555 Site: position = -113 score = 3.97703 sequence = TTTTAAAAAATATATT Gene: CKL_1551: Phosphoserine phosphatase (EC 3.1.3.3) |
|
Gene: CPF_1375: Phosphoserine phosphatase (EC 3.1.3.3) |
*
Clostridium tetani E88 Site: position = -55 score = 4.46253 sequence = ATTAAAATGATATAAT Gene: CTC00969: Phosphoserine phosphatase (EC 3.1.3.3) |
Phosphoserine phosphatase (EC 3.1.3.3) |
| CAC0987 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -155 score = 4.64337 sequence = ATGAAAAAAATTACAT Gene: CAC0987: Hypothetical protein |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -154 score = 4.15647 sequence = AATTAAAAGATATAAT Site: position = -131 score = 4.01886 sequence = AGGAAAAAAATATTAT Site: position = -87 score = 4.00553 sequence = ATATAAATTATTAAAA Gene: CBO1090: Hypothetical protein |
|
Gene: CKL_1552: Hypothetical protein |
*
Clostridium novyi NT Site: position = -56 score = 4.12976 sequence = AATAAAAATATTAAAT Gene: NT01CX_1593: Hypothetical protein |
*
Clostridium perfringens ATCC 13124 Site: position = -98 score = 4.05699 sequence = AATTAAAAATTTAATT Gene: CPF_1911: Hypothetical protein |
Gene: CTC00970: Hypothetical protein |
Hypothetical protein |
| lldR |
|
|
|
|
|
|
|
Gene: CTC00971: Transcription regulator of lactate utilization, GntR family |
Transcription regulator of lactate utilization, GntR family |
| glcA |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -177 score = 4.09829 sequence = ATAAAAAAAATTTTTA Site: position = -149 score = 4.80716 sequence = TTGAAAACGTTATAAT Gene: CBO1005: L-lactate permease |
*
Clostridium butyricum 5521 Site: position = -223 score = 4.08912 sequence = TTGAAAAAATTTTAGT Site: position = -130 score = 4.096 sequence = AAGAAATAAATTTAAT Gene: CBY_3256: L-lactate permease |
|
*
Clostridium novyi NT Site: position = -124 score = 4.13412 sequence = TTTTAAATGTTAATAA Site: position = -32 score = 4.24629 sequence = AAGTAAAAAATTAAAA Gene: NT01CX_1609: L-lactate permease |
Gene: CPF_0307: L-lactate permease |
Gene: CTC00972: L-lactate permease |
L-lactate permease |
| CAC0988 |
Gene: CAC0988: Probably membrane protein |
|
|
|
|
|
|
|
Probably membrane protein |
| CAC0769 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -126 score = 3.98803 sequence = AAAAAAATATTTATAA Site: position = -92 score = 4.80266 sequence = ATGAAAACATTTAAAT Gene: Cbei_2495: Predicted uronate isomerase |
Gene: CBO1006: Predicted uronate isomerase |
|
|
|
|
|
Predicted uronate isomerase |
| CAC0767 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -37 score = 4.57406 sequence = ATAAAAAAGTTTAAAA Gene: CAC0767: Fe-S oxidoreductase |
|
|
|
Gene: CKL_0330: Fe-S oxidoreductase |
|
|
|
Fe-S oxidoreductase |
| CAC2547 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -193 score = 4.3302 sequence = TTAAAAAAGATTAATA Site: position = -124 score = 4.30524 sequence = AAGTAAACGATAATAT Gene: CAC2547: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain |
*3
Clostridium beijerincki NCIMB 8052 Site: position = -156 score = 4.09074 sequence = TGGTAAAAGTTAATAT Site: position = -139 score = 3.93093 sequence = ATTAAAATTATAATAA Site: position = -41 score = 4.00504 sequence = TTATAAATATTTAATA Gene: Cbei_2912: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain Site: position = -134 score = 4.42722 sequence = ATGAAAATATTATATT Gene: Cbei_4918: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain Gene: Cbei_0287: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain |
|
Gene: CBY_1704: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain |
|
|
|
|
Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain |
| CRON 28. | |||||||||
| amyA |
*
Clostridium acetobutylicum ATCC 824 Site: position = 20 score = 4.1882 sequence = AAGAAAAAGCTTACTT Site: position = 86 score = 4.23205 sequence = AAGTAATCGTTTTCAA Gene: CAP0098: Alpha-amylase (EC 3.2.1.1) |
|
|
|
|
|
|
|
Alpha-amylase (EC 3.2.1.1) |
| CRON 29. | |||||||||
| xylS2 |
*2
Clostridium acetobutylicum ATCC 824 Site: position = 120 score = 4.5881 sequence = ATGAAAACGATATCTA Gene: CAC2252: Alpha-xylosidase (EC 3.2.1.177) Gene: CAC2891: Alpha-xylosidase (EC 3.2.1.177) |
|
|
|
|
|
|
|
Alpha-xylosidase (EC 3.2.1.177) |
| CRON 30. | |||||||||
| mglB |
|
Gene: Cbei_4428: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
|
Gene: CBY_1717: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
|
|
|
*
Clostridium tetani E88 Site: position = 42 score = 4.78939 sequence = ATGAAAAAGATTATAT Gene: CTC00860: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
| mglA |
|
|
|
|
|
|
|
Gene: CTC00861: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) |
| mglC |
|
|
|
|
|
|
|
Gene: CTC00862: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) |
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) |
| galR |
Gene: CAC2962: Transcription regulator of galactose utilization, LacI family |
Gene: Cbei_4422: Transcription regulator of galactose utilization, LacI family |
|
Gene: CBY_1723: Transcription regulator of galactose utilization, LacI family |
|
|
|
Gene: CTC00863: Transcription regulator of galactose utilization, LacI family |
Transcription regulator of galactose utilization, LacI family |
| galT |
Gene: CAC2961: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Gene: Cbei_4421: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
|
Gene: CBY_1724: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
|
|
|
Gene: CTC00864: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
| galK |
*
Clostridium acetobutylicum ATCC 824 Site: position = 55 score = 4.829 sequence = ATGAAAATGTTTTCTT Gene: CAC2959: Galactokinase (EC 2.7.1.6) |
Gene: Cbei_4419: Galactokinase (EC 2.7.1.6) |
|
*
Clostridium butyricum 5521 Site: position = 55 score = 4.33111 sequence = CTGAAAATGTTTTCTT Gene: CBY_1726: Galactokinase (EC 2.7.1.6) |
|
|
|
Gene: CTC00865: Galactokinase (EC 2.7.1.6) |
Galactokinase (EC 2.7.1.6) |
| galE |
Gene: CAC2960: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: Cbei_4420: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: CBO2777: UDP-glucose 4-epimerase (EC 5.1.3.2) |
2
Clostridium butyricum 5521 Gene: CBY_1725: UDP-glucose 4-epimerase (EC 5.1.3.2) Gene: CBY_4171: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: CKL_1547: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: NT01CX_1536: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: CPF_0282: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: CTC00866: UDP-glucose 4-epimerase (EC 5.1.3.2) |
UDP-glucose 4-epimerase (EC 5.1.3.2) |
| CRON 31. | |||||||||
| ccpA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -78 score = 4.21606 sequence = TATAAAAAGATTATAA Gene: CAC3037: Catabolite control protein A, LacI family |
Gene: Cbei_0047: Catabolite control protein A, LacI family |
Gene: CBO0100: Catabolite control protein A, LacI family |
Gene: CBY_2264: Catabolite control protein A, LacI family |
Gene: CKL_3751: Catabolite control protein A, LacI family |
*
Clostridium novyi NT Site: position = -61 score = 4.36223 sequence = TTTTAAATGTTTTATA Gene: NT01CX_0643: Catabolite control protein A, LacI family |
*
Clostridium perfringens ATCC 13124 Site: position = -138 score = 4.14548 sequence = TTGAAAAAAAATTAAA Site: position = -152 score = 4.63723 sequence = AAGAAAACGTTTTTTT Gene: CPF_2863: Catabolite control protein A, LacI family |
*
Clostridium tetani E88 Site: position = -122 score = 4.07717 sequence = TTATAAATAATTTAAA Gene: CTC00263: Catabolite control protein A, LacI family |
Catabolite control protein A, LacI family |
| CRON 32. | |||||||||
| oppA |
*
Clostridium acetobutylicum ATCC 824 Site: position = 112 score = 4.51939 sequence = TAGAAAACGTTATAAA Gene: CAC0176: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
|
|
|
|
|
Gene: CPF_2555: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
|
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
| oppB |
Gene: CAC0177: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) |
|
|
|
|
|
Gene: CPF_2554: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) |
|
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) |
| oppC |
Gene: CAC0178: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) |
|
|
|
|
|
Gene: CPF_2553: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) |
|
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) |
| oppD |
Gene: CAC0179: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) |
|
|
|
|
|
Gene: CPF_2552: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) |
|
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) |
| oppF |
Gene: CAC0180: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
|
|
|
|
|
Gene: CPF_2551: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
|
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
| CRON 33. | |||||||||
| clpB |
Gene: CAC0959: ATP-dependent chaperone ClpB |
*
Clostridium beijerincki NCIMB 8052 Site: position = -151 score = 4.34817 sequence = ATAAAAAAATTTAAAA Site: position = -253 score = 4.40464 sequence = TTAAAAAAGTTTAATA Gene: Cbei_0645: ATP-dependent chaperone ClpB |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -52 score = 4.14964 sequence = ATAAAAAAATTAAAAA Site: position = -76 score = 4.63902 sequence = TTGAAAATATTTAAAT Gene: CBO0409: ATP-dependent chaperone ClpB |
Gene: CBY_3692: ATP-dependent chaperone ClpB |
*
Clostridium kluyveri DSM 555 Site: position = -30 score = 4.17463 sequence = AAGAAAAAGTTTTATG Gene: CKL_2702: ATP-dependent chaperone ClpB |
Gene: NT01CX_2301: ATP-dependent chaperone ClpB |
*
Clostridium perfringens ATCC 13124 Site: position = -148 score = 4.32487 sequence = ATATAAATGATTTATT Gene: CPF_1681: ATP-dependent chaperone ClpB |
Gene: CTC00536: ATP-dependent chaperone ClpB |
ATP-dependent chaperone ClpB |
| CRON 34. | |||||||||
| yvbX |
*
Clostridium acetobutylicum ATCC 824 Site: position = 43 score = 4.16236 sequence = TTGTAATCATTTTCAA Gene: CAC1556: Putative peptidoglycan hydrolase YvbX, not involved in spore germination |
|
Gene: CBO1212: Putative peptidoglycan hydrolase YvbX, not involved in spore germination |
|
|
|
|
|
Putative peptidoglycan hydrolase YvbX, not involved in spore germination |
| CRON 35. | |||||||||
| YkgB |
*
Clostridium acetobutylicum ATCC 824 Site: position = 10 score = 4.47418 sequence = ATGAAAAGGTTTATAT Gene: CAC0086: Predicted 6-phosphogluconolactonase |
*
Clostridium beijerincki NCIMB 8052 Site: position = -103 score = 4.20453 sequence = AATTAAATGATTAAAA Gene: Cbei_1278: Predicted 6-phosphogluconolactonase |
|
Gene: CBY_3417: Predicted 6-phosphogluconolactonase |
|
|
Gene: CPF_1232: Predicted 6-phosphogluconolactonase |
|
Predicted 6-phosphogluconolactonase |
| CRON 36. | |||||||||
| kdpA |
|
|
|
*
Clostridium butyricum 5521 Site: position = -250 score = 4.32654 sequence = ATGTAAATGTTTTAAG Gene: CBY_3688: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
Gene: CPF_1210: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| kdpB |
Gene: CAC3681: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
Gene: CBY_3687: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: CKL_1472: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Gene: CPF_1211: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| kdpC |
Gene: CAC3680: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
Gene: CBY_3686: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
Gene: CKL_1473: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Gene: CPF_1212: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| CBY_3685 |
|
|
|
Gene: CBY_3685: hypothetical protein |
|
|
|
|
Hypothetical protein |
| kdpD |
|
|
|
Gene: CBY_3684: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
Gene: CKL_1469: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
|
|
|
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
| kdpE |
Gene: CAC3677: Transcription regulator of potassium transport, OmpR family |
Gene: Cbei_2028: Transcription regulator of potassium transport, OmpR family |
|
Gene: CBY_3683: Transcription regulator of potassium transport, OmpR family |
2
Clostridium kluyveri DSM 555 Gene: CKL_1470: Transcription regulator of potassium transport, OmpR family Gene: CKL_2262: Transcription regulator of potassium transport, OmpR family |
|
Gene: CPF_1214: Transcription regulator of potassium transport, OmpR family |
|
Transcription regulator of potassium transport, OmpR family |
| kdpA/atkA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -332 score = 4.55864 sequence = TTGAAAACATTATCAT Gene: CAC3682: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
|
*
Clostridium kluyveri DSM 555 Site: position = -327 score = 3.9741 sequence = TAGAAAATATTTCAAA Gene: CKL_1471: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
|
|
|
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) |
| kdpX |
Gene: CAC3679: Uncharacterized protein of kdp operon, kdpX |
*
Clostridium beijerincki NCIMB 8052 Site: position = -227 score = 4.56658 sequence = ATGAAAATTATTTAAT Gene: Cbei_2026: Uncharacterized protein of kdp operon, kdpX |
|
|
|
|
|
|
Uncharacterized protein of kdp operon, kdpX |
| kdpD |
Gene: CAC3678: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
Gene: Cbei_2027: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
|
|
Gene: CKL_2263: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
|
Gene: CPF_1213: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
|
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) |
| CRON 37. | |||||||||
| ptnA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -321 score = 4.63959 sequence = ATGAAAACGTATTAAT Gene: CAP0066: PTS system, mannose-specific IIBA component (EC 2.7.1.69) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -374 score = 4.1437 sequence = ATAAAAATTATTTTAT Gene: Cbei_0711: PTS system, mannose-specific IIBA component (EC 2.7.1.69) |
|
*
Clostridium butyricum 5521 Site: position = -370 score = 4.16339 sequence = ATGAAAATAAATTAAA Gene: CBY_1459: PTS system, mannose-specific IIBA component (EC 2.7.1.69) |
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -235 score = 4.50945 sequence = TTGAAAATTTTTTAAA Gene: CPF_0818: PTS system, mannose-specific IIBA component (EC 2.7.1.69) |
|
PTS system, mannose-specific IIBA component (EC 2.7.1.69) |
| manY |
Gene: CAP0067: PTS system, mannose-specific IIC component (EC 2.7.1.69) |
Gene: Cbei_0712: PTS system, mannose-specific IIC component (EC 2.7.1.69) |
|
Gene: CBY_1460: PTS system, mannose-specific IIC component (EC 2.7.1.69) |
|
|
Gene: CPF_0819: PTS system, mannose-specific IIC component (EC 2.7.1.69) |
|
PTS system, mannose-specific IIC component (EC 2.7.1.69) |
| ptnD |
Gene: CAP0068: PTS system, mannose-specific IID component (EC 2.7.1.69) |
Gene: Cbei_0713: PTS system, mannose-specific IID component (EC 2.7.1.69) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -279 score = 3.93449 sequence = TATCAAATGTTTTAAA Gene: CBO2845: PTS system, mannose-specific IID component (EC 2.7.1.69) |
Gene: CBY_1461: PTS system, mannose-specific IID component (EC 2.7.1.69) |
|
|
Gene: CPF_0820: PTS system, mannose-specific IID component (EC 2.7.1.69) |
|
PTS system, mannose-specific IID component (EC 2.7.1.69) |
| CRON 38. | |||||||||
| CAC3648 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -341 score = 4.37425 sequence = TGGAAAACATTTTCAT Gene: CAC3648: Acetyltransferase |
|
|
|
|
|
|
|
Acetyltransferase |
| CRON 39. | |||||||||
| pbp |
*
Clostridium acetobutylicum ATCC 824 Site: position = -308 score = 4.55666 sequence = ATGATAATGTTTTCAA Site: position = -33 score = 4.28796 sequence = ATAAAAAATATTTAAT Gene: CAC3683: Penicillin-binding protein |
Gene: Cbei_1900: Penicillin-binding protein |
|
Gene: CBY_2678: Penicillin-binding protein |
*
Clostridium kluyveri DSM 555 Site: position = -154 score = 4.19348 sequence = ATTTAAATAATTTATT Gene: CKL_2732: Penicillin-binding protein |
|
|
|
Penicillin-binding protein |
| CRON 40. | |||||||||
| bglC |
*
Clostridium acetobutylicum ATCC 824 Site: position = -102 score = 4.20699 sequence = ATGTATACGATTTCTT Site: position = -38 score = 3.95396 sequence = AAGAAAAAATATTATA Gene: CAC1084: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
|
|
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
| xylS |
Gene: CAC1085: Alpha-xylosidase (EC 3.2.1.177) |
Gene: Cbei_0772: Alpha-xylosidase (EC 3.2.1.177) |
|
*
Clostridium butyricum 5521 Site: position = -114 score = 4.15855 sequence = ATATAAAATTTTTAAA Site: position = -48 score = 4.03446 sequence = AATAAAAAATTATTAT Gene: CBY_2409: Alpha-xylosidase (EC 3.2.1.177) |
|
|
|
|
Alpha-xylosidase (EC 3.2.1.177) |
| CRON 41. | |||||||||
| pelL |
*
Clostridium acetobutylicum ATCC 824 Site: position = -165 score = 4.15923 sequence = TTGTTAACGATAACAA Gene: CAC0812: Predicted pectate lyase related protein, secreted |
|
|
|
|
|
|
|
Predicted pectate lyase related protein, secreted |
| CAC0813 |
Gene: CAC0813: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 42. | |||||||||
| CAC3500 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -261 score = 4.34676 sequence = TTGAAAACGATTGTAT Site: position = -203 score = 3.93593 sequence = AAATAAACATTAAAAT Gene: CAC3500: Anaerobic dicarboxylate transport protein |
|
|
|
|
|
|
|
Anaerobic dicarboxylate transport protein |
| frlC |
Gene: CAC3499: Predicted isomerase |
|
|
|
|
|
|
|
Predicted isomerase |
| frlD |
Gene: CAC3498: Fructoselysine kinase (EC 2.7.1.-) |
|
|
|
|
|
|
|
Fructoselysine kinase (EC 2.7.1.-) |
| CRON 43. | |||||||||
| CAC1044 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -261 score = 4.36458 sequence = TTGATAACGTTATCTT Gene: CAC1044: putative oxidoreductase |
|
|
|
|
|
|
|
putative oxidoreductase |
| CRON 44. | |||||||||
| yxkH |
*
Clostridium acetobutylicum ATCC 824 Site: position = -259 score = 4.05381 sequence = AAGATATCGTTTTCAA Site: position = -124 score = 3.91642 sequence = AAAATAATGTTATAAT Gene: CAC0436: Possible polysaccharide deacetylase |
|
|
|
|
*2
Clostridium novyi NT Site: position = -56 score = 4.08692 sequence = ATAATAAAGATTATAA Site: position = -32 score = 4.02018 sequence = ATTATAAAAATTAATT Gene: NT01CX_1328: Possible polysaccharide deacetylase Gene: NT01CX_0443: Possible polysaccharide deacetylase |
|
*
Clostridium tetani E88 Site: position = -163 score = 4.10514 sequence = TTGAAATAGATATTAA Gene: CTC01186: Possible polysaccharide deacetylase |
Possible polysaccharide deacetylase |
| CRON 45. | |||||||||
| CAC0635 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -197 score = 4.12632 sequence = TTTAATACGATTACAT Gene: CAC0635: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 46. | |||||||||
| CAC0270 |
*
Clostridium acetobutylicum ATCC 824 Site: position = 27 score = 4.03735 sequence = ATAAAAAAAATAAATT Gene: CAC0270: Hypothetical protein |
|
|
|
|
|
|
|
Hypothetical protein |
| CRON 47. | |||||||||
| licT |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = 58 score = 3.9719 sequence = AAGAAATAATTATAAT Gene: CBO0654: Beta-glucoside bgl operon antiterminator, BglG family |
*
Clostridium butyricum 5521 Site: position = -170 score = 4.23301 sequence = ATGTAAAAAATAATAT Site: position = -147 score = 4.12182 sequence = TTGACAACGTTTTCTA Gene: CBY_4099: Beta-glucoside bgl operon antiterminator, BglG family |
|
|
|
|
Beta-glucoside bgl operon antiterminator, BglG family |
| bglP |
*
Clostridium acetobutylicum ATCC 824 Site: position = 49 score = 4.08861 sequence = AAGAAAACGTTAACAG Gene: CAC1407: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -141 score = 4.10866 sequence = TTTAAAAAGAATAAAA Site: position = 49 score = 4.00874 sequence = AAGAAAACGTTAATAG Gene: Cbei_3273: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69) |
|
*2
Clostridium butyricum 5521 Site: position = -42 score = 4.30388 sequence = ATAAAAATAATTAAAT Gene: CBY_1093: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69) Gene: CBY_4098: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69) |
|
|
|
|
PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69) |
| bglH2 |
Gene: CAC1408: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
Gene: Cbei_3271: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
|
Gene: CBY_4097: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
|
|
|
|
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
| Cbei_3272 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = 0 score = 4.18331 sequence = ATGAAAAAAATAATTA Gene: Cbei_3272: Putative secreted hydrolase |
|
|
|
|
|
|
Putative secreted hydrolase |
| CRON 48. | |||||||||
| mtlA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -112 score = 3.93146 sequence = TTGAAAACGTATACCA Gene: CAC0154: PTS system, mannitol-specific IIBC component (EC 2.7.1.69) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -86 score = 3.99566 sequence = TTGAAAAGGTATTCTT Gene: Cbei_0242: PTS system, mannitol-specific IIBC component (EC 2.7.1.69) |
|
|
|
|
|
|
PTS system, mannitol-specific IIBC component (EC 2.7.1.69) |
| CRON 49. | |||||||||
| CAC0019 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -88 score = 3.99602 sequence = ATGAAATCACTTTCAT Gene: CAC0019: Transcriptional regulator, TetR family |
*
Clostridium beijerincki NCIMB 8052 Site: position = 85 score = 4.18428 sequence = ATGAAAAAGGTTATTA Gene: Cbei_3335: Transcriptional regulator, TetR family |
|
|
|
|
|
|
Transcriptional regulator, TetR family |
| CRON 50. | |||||||||
| CAC0423 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -249 score = 4.24779 sequence = AATTAAAAGTTTTATA Gene: CAC0423: PTS system, sucrose-specific IIBCA component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, sucrose-specific IIBCA component (EC 2.7.1.69) |
| scrK |
Gene: CAC0424: Fructokinase (EC 2.7.1.4) |
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_3876: Fructokinase (EC 2.7.1.4) Gene: Cbei_5009: Fructokinase (EC 2.7.1.4) |
|
Gene: CBY_3745: Fructokinase (EC 2.7.1.4) |
|
|
2
Clostridium perfringens ATCC 13124 Gene: CPF_0734: Fructokinase (EC 2.7.1.4) Gene: CPF_1782: Fructokinase (EC 2.7.1.4) |
|
Fructokinase (EC 2.7.1.4) |
| sacA |
Gene: CAC0425: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
|
|
|
|
|
|
Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
| scrR |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -37 score = 3.96562 sequence = ATAATAATATTTATAT Gene: Cbei_5011: Sucrose operon repressor ScrR, LacI family |
|
Gene: CBY_3743: Sucrose operon repressor ScrR, LacI family |
|
|
Gene: CPF_1784: Sucrose operon repressor ScrR, LacI family |
|
Sucrose operon repressor ScrR, LacI family |
| scrB |
|
Gene: Cbei_5010: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
Gene: CBY_3744: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
|
Gene: CPF_1783: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
| CPF_0733 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -95 score = 4.03419 sequence = AATAAAAATATTTCTT Site: position = -57 score = 4.27552 sequence = ATGTAAATGTTTAACT Gene: CPF_0733: Predicted sucrose transporter |
|
Predicted sucrose transporter |
| CRON 51. | |||||||||
| eglA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -76 score = 3.91006 sequence = CAGATAACGTTTACAA Gene: CAC0706: Endo-1,4-beta glucanase (EC 3.2.1.4) (fused to two ricin-B-like domains) |
|
|
|
|
|
|
|
Endo-1,4-beta glucanase (EC 3.2.1.4) (fused to two ricin-B-like domains) |
| CRON 52. | |||||||||
| bglH |
*
Clostridium acetobutylicum ATCC 824 Site: position = -151 score = 3.88818 sequence = ATGATAACCTTATCAT Gene: CAC0743: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -61 score = 4.2055 sequence = ATATAAACATTTTATA Gene: Cbei_2832: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
|
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86) |
| CRON 53. | |||||||||
| arb43 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -94 score = 3.9541 sequence = TTGAGAAAGATAAAAT Site: position = 7 score = 4.27959 sequence = ATGAAAAAATATTAAA Gene: CAC1529: Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55) |
|
|
|
|
|
|
|
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55) |
| araT |
Gene: CAC1530: Putative arabinoside transporter |
|
|
|
|
|
|
|
Putative arabinoside transporter |
| CRON 54. | |||||||||
| CAC1457 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -118 score = 4.13668 sequence = ATTAAAATATTATTAA Gene: CAC1457: PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69) |
| CAC1458 |
Gene: CAC1458: PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69) |
| CAC1459 |
Gene: CAC1459: PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69) |
| CAC1460 |
Gene: CAC1460: PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69) |
| CAC1461 |
Gene: CAC1461: PTS system, fructose- and mannose-inducible putative EII component |
|
|
|
|
|
|
|
PTS system, fructose- and mannose-inducible putative EII component |
| CRON 55. | |||||||||
| glcK |
*
Clostridium acetobutylicum ATCC 824 Site: position = -349 score = 4.0056 sequence = AAGAAAATTATAAATT Gene: CAC2613: Glucokinase (EC 2.7.1.2) |
Gene: Cbei_4895: Glucokinase (EC 2.7.1.2) |
|
|
|
|
|
*
Clostridium tetani E88 Site: position = -286 score = 4.31857 sequence = TAGAAAAAAATTAAAA Gene: CTC00230: Glucokinase (EC 2.7.1.2) |
Glucokinase (EC 2.7.1.2) |
| CRON 56. | |||||||||
| CAC2810 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -32 score = 4.1642 sequence = TTGTTAAAAATTAAAT Gene: CAC2810: Possible secreted glucoamylase |
|
|
|
|
|
|
|
Possible secreted glucoamylase |
| CRON 57. | |||||||||
| xynT |
*
Clostridium acetobutylicum ATCC 824 Site: position = -41 score = 3.91801 sequence = TTGAAAACGTTTAGTG Gene: CAC3422: Xyloside transporter XynT |
|
|
|
|
|
|
|
Xyloside transporter XynT |
| CRON 58. | |||||||||
| ptgA |
*
Clostridium acetobutylicum ATCC 824 Site: position = 3 score = 4.08092 sequence = TTTAAAAAATTATTTT Gene: CAC3427: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
|
|
|
PTS system, glucose-specific IIA component (EC 2.7.1.69) |
| CRON 59. | |||||||||
| xynT |
*
Clostridium acetobutylicum ATCC 824 Site: position = -69 score = 4.35898 sequence = TTGAAAAAGTTTGTAT Site: position = -35 score = 4.39776 sequence = ATGTAAATAATTACAA Gene: CAC3451: Xyloside transporter XynT |
*
Clostridium beijerincki NCIMB 8052 Site: position = -41 score = 4.18124 sequence = AAGAAAAATATTATAA Gene: Cbei_4125: Xyloside transporter XynT |
|
|
|
|
|
|
Xyloside transporter XynT |
| xynD |
Gene: CAC3452: Beta-xylosidase (EC 3.2.1.37) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -142 score = 4.04734 sequence = TTGTAAACGATTATTG Site: position = -35 score = 3.89789 sequence = TAATAAATATTTTATT Gene: Cbei_4126: Beta-xylosidase (EC 3.2.1.37) |
|
|
|
|
|
|
Beta-xylosidase (EC 3.2.1.37) |
| CRON 60. | |||||||||
| manB |
*3
Clostridium acetobutylicum ATCC 824 Site: position = -147 score = 4.26624 sequence = TTGTAAATTATTAAAA Gene: CAC0538: Beta-mannanase ManB-like enzyme Site: position = -58 score = 4.15418 sequence = ATAAAAACTTTATAAA Gene: CAC0539: Beta-mannanase ManB-like enzyme Gene: CAC0540: Beta-mannanase ManB-like enzyme |
|
|
|
|
|
|
|
Beta-mannanase ManB-like enzyme |
| CRON 61. | |||||||||
| gamP |
*
Clostridium acetobutylicum ATCC 824 Site: position = -31 score = 4.02533 sequence = ATTTTAAAGATAAAAT Gene: CAC0570: PTS system, predicted glucoseamine-specific IICBA component |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = 0 score = 4.37426 sequence = TTGAAAAATATTTTAA Gene: CBO2754: PTS system, predicted glucoseamine-specific IICBA component |
|
|
2
Clostridium novyi NT Gene: NT01CX_0332: PTS system, predicted glucoseamine-specific IICBA component Gene: NT01CX_1858: PTS system, predicted glucoseamine-specific IICBA component |
|
*
Clostridium tetani E88 Site: position = -29 score = 4.07941 sequence = TTTAAAAAAATAATAT Site: position = 0 score = 4.09058 sequence = ATGAAAAAGCTATTTA Gene: CTC00278: PTS system, predicted glucoseamine-specific IICBA component |
PTS system, predicted glucoseamine-specific IICBA component |
| CRON 62. | |||||||||
| nagE |
*
Clostridium acetobutylicum ATCC 824 Site: position = -219 score = 4.06961 sequence = TTGTAAACGATGTAAA Gene: CAC1353: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69) |
|
Gene: CBO2839: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69) |
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -116 score = 4.01994 sequence = TAGATAACTTTTATAT Gene: CPF_0071: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69) |
|
PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69) |
| CRON 63. | |||||||||
| CAC1354 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -197 score = 4.52842 sequence = ATGAAAAAAATTTTAA Gene: CAC1354: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) |
|
Gene: CBO2837: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
|
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) |
| CRON 64. | |||||||||
| Cbei_3309 |
|
Gene: Cbei_3309: Uncharacterized ABC transporter, ATP-binding protein |
|
*
Clostridium butyricum 5521 Site: position = -77 score = 4.07055 sequence = TTGAAATAAATTTATA Gene: CBY_2354: Uncharacterized ABC transporter, ATP-binding protein |
*
Clostridium kluyveri DSM 555 Site: position = -77 score = 4.1417 sequence = TTTAAAATTATTATAT Gene: CKL_2172: Uncharacterized ABC transporter, ATP-binding protein |
|
|
|
Uncharacterized ABC transporter, ATP-binding protein |
| Cbei_3308 |
|
Gene: Cbei_3308: Uncharacterized ABC transporter, ATP-binding and permease protein |
|
Gene: CBY_2355: Uncharacterized ABC transporter, ATP-binding and permease protein |
Gene: CKL_2171: Uncharacterized ABC transporter, ATP-binding and permease protein |
|
|
|
Uncharacterized ABC transporter, ATP-binding and permease protein |
| CRON 65. | |||||||||
| aspC1 |
Gene: CAC2832: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
Gene: Cbei_4794: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -50 score = 4.07681 sequence = ATGTTAAAGATAATAA Site: position = -94 score = 4.53644 sequence = ATGAAAAATATTTAAA Site: position = -224 score = 4.11118 sequence = ATATAAAAAATTATAT Gene: CBO1014: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
Gene: CBY_3855: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
Gene: CKL_0889: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
*
Clostridium novyi NT Site: position = -128 score = 4.13448 sequence = CTGTAAACGTTATTAT Gene: NT01CX_0284: Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
|
|
Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) |
| CRON 66. | |||||||||
| fucI |
|
|
|
*
Clostridium butyricum 5521 Site: position = -73 score = 4.74078 sequence = AAGAAAACGTTTAAAA Gene: CBY_1564: L-fucose isomerase |
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -93 score = 4.71017 sequence = AAGAAAACGTTTATAT Gene: CPF_1048: L-fucose isomerase (EC 5.3.1.25) |
|
L-fucose isomerase (EC 5.3.1.25) |
| fucK |
|
|
|
Gene: CBY_1565: rhamnulokinase |
|
|
Gene: CPF_1049: L-fuculokinase( EC:2.7.1.51 ) |
|
L-fuculokinase( EC:2.7.1.51 ) |
| fucU |
|
|
|
Gene: CBY_1566: L-fucose mutarotase (EC 5.1.3.n2) |
|
|
Gene: CPF_1050: L-fucose mutarotase (EC 5.1.3.n2) |
|
L-fucose mutarotase (EC 5.1.3.n2) |
| fucA |
|
|
|
Gene: CBY_1567: L-fuculose phosphate aldolase (EC 4.1.2.17) |
|
|
Gene: CPF_1051: L-fuculose phosphate aldolase (EC 4.1.2.17) |
|
L-fuculose phosphate aldolase (EC 4.1.2.17) |
| fucP |
|
|
|
Gene: CBY_1568: L-fucose:H+ symporter permease |
|
|
Gene: CPF_1052: L-fucose:H+ symporter permease |
|
L-fucose:H+ symporter permease |
| CRON 67. | |||||||||
| CPF_2879 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -19 score = 4.18097 sequence = TTGTTAAATTTTTAAT Gene: CPF_2879: hypothetical protein |
|
hypothetical protein |
| glpF |
Gene: CAC1319: Glycerol uptake facilitator protein |
*
Clostridium beijerincki NCIMB 8052 Site: position = -132 score = 4.42262 sequence = TTTAAAACTTTTAAAT Gene: Cbei_4511: Glycerol uptake facilitator protein |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -150 score = 4.25003 sequence = TTGAAAACGTAAACAA Gene: CBO2785: Glycerol uptake facilitator protein |
|
|
*2
Clostridium novyi NT Site: position = -107 score = 4.19344 sequence = TATAAAAAGTTATATT Gene: NT01CX_0606: Glycerol uptake facilitator protein Site: position = -104 score = 4.19688 sequence = ATACAAACGTTTTCAA Gene: NT01CX_0609: Glycerol uptake facilitator protein |
*2
Clostridium perfringens ATCC 13124 Site: position = -60 score = 4.00704 sequence = TATTAAATGTTTATTA Gene: CPF_1170: Glycerol uptake facilitator protein Gene: CPF_2878: Glycerol uptake facilitator protein |
*
Clostridium tetani E88 Site: position = -32 score = 3.84082 sequence = AATTAAATATTTATTA Gene: CTC01996: Glycerol uptake facilitator protein |
Glycerol uptake facilitator protein |
| glpP |
*
Clostridium acetobutylicum ATCC 824 Site: position = -26 score = 4.09907 sequence = AGGATAATGTTTACTT Gene: CAC1320: Glycerol uptake operon antiterminator regulatory protein |
*
Clostridium beijerincki NCIMB 8052 Site: position = -26 score = 4.48972 sequence = AAGAAAACAATTACAT Gene: Cbei_4510: Glycerol uptake operon antiterminator regulatory protein |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -33 score = 4.21352 sequence = ATTAAAAAATTAATAT Gene: CBO2768: Glycerol uptake operon antiterminator regulatory protein |
|
|
|
Gene: CPF_2877: Glycerol uptake operon antiterminator regulatory protein |
Gene: CTC01759: Glycerol uptake operon antiterminator regulatory protein |
Glycerol uptake operon antiterminator regulatory protein |
| glpK |
Gene: CAC1321: Glycerol kinase (EC 2.7.1.30) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -73 score = 3.86364 sequence = ATATAAATAATAAATT Gene: Cbei_4509: Glycerol kinase (EC 2.7.1.30) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -77 score = 4.26213 sequence = TTTTAAAAGATTATTT Gene: CBO2784: Glycerol kinase (EC 2.7.1.30) |
Gene: CBY_0952: Glycerol kinase (EC 2.7.1.30) |
|
*2
Clostridium novyi NT Gene: NT01CX_0605: Glycerol kinase (EC 2.7.1.30) Site: position = -54 score = 3.88151 sequence = ATGAAAAATAAATTAT Gene: NT01CX_0608: Glycerol kinase (EC 2.7.1.30) |
Gene: CPF_2876: Glycerol kinase (EC 2.7.1.30) |
*2
Clostridium tetani E88 Gene: CTC01758: Glycerol kinase (EC 2.7.1.30) Site: position = -143 score = 4.19032 sequence = TTGAAATCATTATAAT Gene: CTC02462: Glycerol kinase (EC 2.7.1.30) |
Glycerol kinase (EC 2.7.1.30) |
| glpA |
Gene: CAC1322: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -143 score = 3.9126 sequence = AAGTATACATTTACAT Gene: Cbei_4508: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) |
|
Gene: CBY_0953: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) |
|
|
Gene: CPF_2875: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) |
|
Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) |
| dhaK |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -52 score = 4.03433 sequence = ATATAAATAATTTTAA Gene: Cbei_2148: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
*2
Clostridium butyricum 5521 Site: position = -96 score = 4.232 sequence = ATGAAATAGTTATATA Gene: CBY_3691: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK Gene: CBY_0507: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
*
Clostridium novyi NT Site: position = -33 score = 4.01754 sequence = TATAAAAGGTTTTCAA Gene: NT01CX_0689: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
|
*
Clostridium tetani E88 Site: position = -169 score = 4.28791 sequence = ATTAAAAATATTTCAA Gene: CTC01762: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK |
| dhaM |
|
Gene: Cbei_2149: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
2
Clostridium butyricum 5521 Gene: CBY_3690: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL Gene: CBY_0506: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
Gene: CKL_0697: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
Gene: NT01CX_0688: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
|
Gene: CTC01761: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL |
| dhaL |
|
Gene: Cbei_2150: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
2
Clostridium butyricum 5521 Gene: CBY_3689: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component Gene: CBY_0505: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
Gene: CKL_0698: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
Gene: NT01CX_0687: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
|
Gene: CTC01760: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component |
| gldA |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -70 score = 3.94366 sequence = ATGTAAACGATATTAC Site: position = -36 score = 3.88242 sequence = AATAAAAATATTTTTA Gene: CBO0976: Glycerol dehydrogenase (EC 1.1.1.6) |
*
Clostridium butyricum 5521 Site: position = -61 score = 4.49826 sequence = TTGTAAACGATATTAT Gene: CBY_0508: Glycerol dehydrogenase (EC 1.1.1.6) |
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -31 score = 4.37695 sequence = TAGTAAATGATTTTAT Gene: CPF_0094: Glycerol dehydrogenase (EC 1.1.1.6) |
|
Glycerol dehydrogenase (EC 1.1.1.6) |
| CAC1323 |
Gene: CAC1323: Sarcosine oxidase alpha subunit (EC 1.5.3.1) |
Gene: Cbei_4507: Sarcosine oxidase alpha subunit (EC 1.5.3.1) |
|
|
|
|
|
|
Sarcosine oxidase alpha subunit (EC 1.5.3.1) |
| CAC1324 |
Gene: CAC1324: Uncharacterized predected metal-binding protein |
Gene: Cbei_4506: Uncharacterized predected metal-binding protein |
|
|
|
|
|
|
Uncharacterized predected metal-binding protein |
| dak |
|
|
Gene: CBO0975: Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) / FAD-AMP lyase (cyclizing) (EC 4.6.1.15) |
|
|
|
Gene: CPF_0095: Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) / FAD-AMP lyase (cyclizing) (EC 4.6.1.15) |
|
Dihydroxyacetone kinase, ATP-dependent (EC 2.7.1.29) / FAD-AMP lyase (cyclizing) (EC 4.6.1.15) |
| CRON 68. | |||||||||
| licT |
*
Clostridium acetobutylicum ATCC 824 Site: position = -154 score = 4.74021 sequence = ATGAAAATGTTATCAT Gene: CAC0422: Beta-glucoside bgl operon antiterminator, BglG family |
|
|
|
|
|
|
|
Beta-glucoside bgl operon antiterminator, BglG family |
| CRON 69. | |||||||||
| nifJ2 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -117 score = 4.54065 sequence = TTGAAAAAAATTTTAT Gene: CAC2229: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4318: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Site: position = -223 score = 4.38711 sequence = TTTTAAAAGTTATAAT Gene: Cbei_1853: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -191 score = 4.31724 sequence = TTTAAAATGATTTTTA Gene: CBO2760: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*3
Clostridium butyricum 5521 Site: position = -166 score = 4.26617 sequence = TTGTAAACAATAAAAA Gene: CBY_0233: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Site: position = -228 score = 4.10709 sequence = TTTATAAAAATTTAAT Gene: CBY_1889: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) Site: position = -186 score = 4.35086 sequence = AATTAAATGTTTAAAT Gene: CBY_3642: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Gene: CKL_2138: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
*
Clostridium novyi NT Site: position = -193 score = 4.11937 sequence = TTGAAAAAGTGTACAA Gene: NT01CX_1854: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Gene: CPF_2318: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Gene: CTC01741: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
| CRON 70. | |||||||||
| sspA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -72 score = 4.16841 sequence = TAAAAAACGTTATTAT Gene: CAC2372: Small acid-soluble spore protein beta |
Gene: Cbei_1798: Small acid-soluble spore protein beta |
Gene: CBO3145: Small acid-soluble spore protein beta |
*
Clostridium butyricum 5521 Site: position = -116 score = 4.56857 sequence = AAGAAAATGATTTTAT Gene: CBY_0566: Small acid-soluble spore protein beta |
Gene: CKL_3208: Small acid-soluble spore protein beta |
Gene: NT01CX_1748: Small acid-soluble spore protein beta |
Gene: CPF_2159: Small acid-soluble spore protein beta |
|
Small acid-soluble spore protein beta |
| CAC2371 |
Gene: CAC2371: Methyltransferase (EC 2.1.1.-) |
Gene: Cbei_1799: Methyltransferase (EC 2.1.1.-) |
Gene: CBO3144: Methyltransferase (EC 2.1.1.-) |
Gene: CBY_0565: Methyltransferase (EC 2.1.1.-) |
Gene: CKL_3209: Methyltransferase (EC 2.1.1.-) |
Gene: NT01CX_1749: Methyltransferase (EC 2.1.1.-) |
Gene: CPF_2158: Methyltransferase (EC 2.1.1.-) |
*
Clostridium tetani E88 Site: position = -51 score = 4.19393 sequence = AAGAAAAATATATAAT Gene: CTC02292: Methyltransferase (EC 2.1.1.-) |
Methyltransferase (EC 2.1.1.-) |
| hslO |
Gene: CAC2370: Chaperonin |
Gene: Cbei_1800: Chaperonin |
Gene: CBO3143: Chaperonin |
Gene: CBY_0564: Chaperonin |
Gene: CKL_3210: Chaperonin |
Gene: NT01CX_1750: Chaperonin |
Gene: CPF_2157: Chaperonin |
Gene: CTC02291: Chaperonin |
Chaperonin |
| CRON 71. | |||||||||
| CAC3669 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -69 score = 4.2872 sequence = ATGTATATGTTTTCAT Gene: CAC3669: Transcriptional regulator, MarR family |
Gene: Cbei_4981: Transcriptional regulator, MarR family |
Gene: CBO0645: Transcriptional regulator, MarR family |
*
Clostridium butyricum 5521 Site: position = -98 score = 4.0147 sequence = TTTAAAATGTAAAAAT Gene: CBY_0511: Transcriptional regulator, MarR family |
Gene: CKL_1651: Transcriptional regulator, MarR family |
|
|
|
Transcriptional regulator, MarR family |
| CAC3668 |
Gene: CAC3668: Predicted transporter protein |
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4980: Predicted transporter protein Gene: Cbei_5058: Predicted transporter protein |
Gene: CBO0646: Predicted transporter protein |
Gene: CBY_0510: Predicted transporter protein |
Gene: CKL_1650: Predicted transporter protein |
|
|
|
Predicted transporter protein |
| CRON 72. | |||||||||
| sdaR |
*
Clostridium acetobutylicum ATCC 824 Site: position = -126 score = 4.55235 sequence = ATTAAAATGATTAAAA Gene: CAC2833: Sugar diacid utilization regulator SdaR |
Gene: Cbei_4476: Sugar diacid utilization regulator SdaR |
|
Gene: CBY_1135: Sugar diacid utilization regulator SdaR |
|
Gene: NT01CX_0982: Sugar diacid utilization regulator SdaR |
*
Clostridium perfringens ATCC 13124 Site: position = -131 score = 4.73295 sequence = TTGTAAATGTTTAAAT Gene: CPF_0851: Sugar diacid utilization regulator SdaR |
|
Sugar diacid utilization regulator SdaR |
| CRON 73. | |||||||||
| mepA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -154 score = 4.60413 sequence = ATGAAAACATTAAAAT Gene: CAC3295: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -139 score = 4.1368 sequence = TAGAAAAATTTATAAA Gene: CBO2780: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
Gene: CBY_0420: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
|
*
Clostridium novyi NT Site: position = -96 score = 4.24204 sequence = ATTAAATTGTTTTTAT Gene: NT01CX_2313: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
|
*
Clostridium tetani E88 Site: position = -136 score = 4.16396 sequence = ATGTAAATTTTAAATT Gene: CTC01362: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
| CRON 74. | |||||||||
| CPF_0244 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -223 score = 4.17159 sequence = TTAAAAATGTTAATAA Site: position = -129 score = 4.53066 sequence = TTGAAAACGTTTAGAT Site: position = -28 score = 4.47948 sequence = ATTAAAAAATTTTAAA Gene: CPF_0244: Predicted hydrolase |
|
Predicted hydrolase |
| CRON 75. | |||||||||
| murD |
Gene: CAC3194: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
Gene: Cbei_0107: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -73 score = 4.49419 sequence = TTTAAAATGTTTTATA Gene: CBO3516: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
Gene: CBY_2184: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
Gene: CKL_0181: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
*
Clostridium novyi NT Site: position = -152 score = 4.58027 sequence = ATAAAAAAGTTTTTAT Gene: NT01CX_1049: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
Gene: CPF_2774: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
Gene: CTC00213: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) |
| CRON 76. | |||||||||
| hom |
|
|
|
|
|
|
|
*
Clostridium tetani E88 Site: position = -24 score = 4.7171 sequence = AAGAAAACGTTTTCTT Gene: CTC00886: Homoserine dehydrogenase (EC 1.1.1.3) |
Homoserine dehydrogenase (EC 1.1.1.3) |
| CRON 77. | |||||||||
| nagE |
|
Gene: Cbei_4532: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69) |
|
Gene: CBY_1684: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69) |
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -151 score = 4.77759 sequence = AAGAAAACGTTTTAAA Gene: CPF_1070: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69) |
|
PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69) |
| CRON 78. | |||||||||
| manA |
|
Gene: Cbei_0996: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
|
*
Clostridium butyricum 5521 Site: position = -77 score = 4.04506 sequence = ATGTAAATGAATTTTA Gene: CBY_1661: Mannose-6-phosphate isomerase (EC 5.3.1.8) |
|
|
|
|
Mannose-6-phosphate isomerase (EC 5.3.1.8) |
| CRON 79. | |||||||||
| pelX |
|
|
|
*
Clostridium butyricum 5521 Site: position = -164 score = 4.7797 sequence = ATGAAAACGATTATAA Site: position = -32 score = 4.12391 sequence = TTGTTAACGTTAACTA Gene: CBY_2353: Pectate lyase (EC 4.2.2.9) |
|
|
|
|
Pectate lyase (EC 4.2.2.9) |
| CRON 80. | |||||||||
| malE |
|
|
|
Gene: CBY_0822: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE |
Gene: CKL_3170: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE |
|
*
Clostridium perfringens ATCC 13124 Site: position = -183 score = 4.76933 sequence = TTGAAAATGTTTTCTT Site: position = -128 score = 4.46875 sequence = TTTAAAAAGATTTTAA Gene: CPF_2652: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE |
|
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE |
| malF |
|
|
|
Gene: CBY_0821: maltose transport system permease protein MalF |
|
|
Gene: CPF_2651: maltose transport system permease protein MalF |
|
maltose transport system permease protein MalF |
| malG |
|
|
|
Gene: CBY_0820: Maltose/maltodextrin ABC transporter, permease protein MalG |
|
|
Gene: CPF_2650: Maltose/maltodextrin ABC transporter, permease protein MalG |
|
Maltose/maltodextrin ABC transporter, permease protein MalG |
| CRON 81. | |||||||||
| nagJ |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -128 score = 4.75685 sequence = TTGAAAACGATTTTAA Site: position = -91 score = 4.14334 sequence = ATAAAAATGTATTAAA Gene: CPF_0875: O-N-acetylglucosaminidase (EC 3.2.1.169) |
|
O-N-acetylglucosaminidase (EC 3.2.1.169) |
| CRON 82. | |||||||||
| fucO |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -119 score = 4.74961 sequence = TTGAAAACGATTTATA Gene: Cbei_0455: Lactaldehyde reductase (EC 1.1.1.77) |
|
*
Clostridium butyricum 5521 Site: position = -66 score = 4.13443 sequence = TTGATAAAAATATAAT Gene: CBY_1562: Lactaldehyde reductase (EC 1.1.1.77) |
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -148 score = 4.2727 sequence = ATTAAAAATATTTATT Gene: CPF_1046: Lactaldehyde reductase (EC 1.1.1.77) |
|
Lactaldehyde reductase (EC 1.1.1.77) |
| CRON 83. | |||||||||
| niaX |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -178 score = 4.15855 sequence = ATATAAAATTTTTAAA Gene: Cbei_1404: Substrate-specific component NiaX of predicted niacin ECF transporter |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -207 score = 4.30323 sequence = ATTTAAATAATTTAAT Gene: CBO2620: Substrate-specific component NiaX of predicted niacin ECF transporter |
*
Clostridium butyricum 5521 Site: position = -215 score = 4.75754 sequence = ATGTAAATGTTTTAAA Gene: CBY_0041: Substrate-specific component NiaX of predicted niacin ECF transporter |
Gene: CKL_1488: Substrate-specific component NiaX of predicted niacin ECF transporter |
Gene: NT01CX_1651: Substrate-specific component NiaX of predicted niacin ECF transporter |
|
Gene: CTC01003: Substrate-specific component NiaX of predicted niacin ECF transporter |
Substrate-specific component NiaX of predicted niacin ECF transporter |
| CRON 84. | |||||||||
| CBY_0862 |
|
|
|
*
Clostridium butyricum 5521 Site: position = -104 score = 4.71774 sequence = ATGAAAATGATTACTT Gene: CBY_0862: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
|
|
|
|
PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
| Cbei_4640 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -214 score = 4.31857 sequence = TAGAAAAAAATTAAAA Gene: Cbei_4640: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
*3
Clostridium butyricum 5521 Site: position = -104 score = 4.49225 sequence = AAGAAAACATTTACAA Gene: CBY_2074: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) Site: position = -228 score = 4.37824 sequence = AATAAAAAGATTAAAA Gene: CBY_0874: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) Gene: CBY_0863: PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
PTS system, cellobiose-specific IIA component (EC 2.7.1.69) |
| CBY_0864 |
|
Gene: Cbei_4639: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
|
3
Clostridium butyricum 5521 Gene: CBY_2073: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) Gene: CBY_0875: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) Gene: CBY_0864: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
|
|
|
|
PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
| CBY_0865 |
|
|
|
Gene: CBY_0865: Putative sugar kinase |
|
|
|
|
Putative sugar kinase |
| bglA |
|
Gene: Cbei_3984: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
2
Clostridium butyricum 5521 Gene: CBY_0860: 6-phospho-beta-glucosidase (EC 3.2.1.86) Gene: CBY_0866: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
6-phospho-beta-glucosidase (EC 3.2.1.86) |
| CRON 85. | |||||||||
| galU |
|
|
|
*
Clostridium butyricum 5521 Site: position = -147 score = 4.12227 sequence = TAATAAATGATTAAAT Site: position = -99 score = 4.73076 sequence = ATTAAAACGTTTAAAA Gene: CBY_1554: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) |
|
|
|
|
UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) |
| CRON 86. | |||||||||
| licH |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -74 score = 4.73076 sequence = ATTAAAACGTTTAAAA Gene: Cbei_4847: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
|
|
6-phospho-beta-glucosidase (EC 3.2.1.86) |
| bglP |
|
Gene: Cbei_4846: Beta-glucoside-specific phosphotransferase enzyme IIBCA component (EC 2.7.1.69) |
|
|
|
|
|
|
Beta-glucoside-specific phosphotransferase enzyme IIBCA component (EC 2.7.1.69) |
| Cbei_4845 |
|
Gene: Cbei_4845: Predicted racemase |
|
|
|
|
|
|
Predicted racemase |
| CRON 87. | |||||||||
| pulA |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -106 score = 4.70465 sequence = TTGAAAACGTTATTAT Gene: CPF_1087: Pullulanase (EC 3.2.1.41) |
|
Pullulanase (EC 3.2.1.41) |
| CRON 88. | |||||||||
| pagL |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -195 score = 4.71287 sequence = ATGAAAATATTTTCAT Gene: Cbei_4984: Phospho-alpha-glucosidase (EC 3.2.1.122) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -219 score = 4.28023 sequence = TAGAAAAAGATATTAA Site: position = -79 score = 4.48028 sequence = TTGATAATGATTAAAT Gene: CBO0267: Phospho-alpha-glucosidase (EC 3.2.1.122) |
|
|
|
|
|
Phospho-alpha-glucosidase (EC 3.2.1.122) |
| glcB |
|
Gene: Cbei_4983: PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69) |
Gene: CBO0268: PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69) |
|
|
|
|
|
PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69) |
| ypqE |
|
Gene: Cbei_4982: PTS system, glucose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
|
|
PTS system, glucose-specific IIA component (EC 2.7.1.69) |
| CRON 89. | |||||||||
| glsA |
|
|
Gene: CBO2808: Glutaminase (EC 3.5.1.2) |
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -99 score = 4.32956 sequence = TTTTAAAAGATTTATA Site: position = -75 score = 4.70319 sequence = TTGAAAATGTTATAAT Gene: CPF_2251: Glutaminase (EC 3.5.1.2) |
*
Clostridium tetani E88 Site: position = -167 score = 4.17423 sequence = ATAAAAACAATATAAA Site: position = -148 score = 4.24192 sequence = AATAAAACGATAAAAA Gene: CTC00566: Glutaminase (EC 3.5.1.2) |
Glutaminase (EC 3.5.1.2) |
| CRON 90. | |||||||||
| Cbei_4985 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -131 score = 4.71287 sequence = ATGAAAATATTTTCAT Gene: Cbei_4985: Predicted transcriptional regulator of glucosides utilization, RpiR family |
|
|
|
|
|
|
Predicted transcriptional regulator of glucosides utilization, RpiR family |
| CRON 91. | |||||||||
| glvC |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -161 score = 4.70753 sequence = ATGTAAACATTTTAAT Gene: CBO0277: PTS system, maltose-specific IIBC component (EC 2.7.1.69) |
|
|
|
|
|
PTS system, maltose-specific IIBC component (EC 2.7.1.69) |
| CRON 92. | |||||||||
| mglB |
|
Gene: Cbei_4434: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
|
*
Clostridium butyricum 5521 Site: position = -43 score = 4.68457 sequence = ATGTAAACGATTTTAA Gene: CBY_1710: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
|
|
|
|
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) |
| mglA |
|
Gene: Cbei_4433: Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3) |
|
Gene: CBY_1711: Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3) |
|
|
|
|
Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3) |
| mglC |
|
Gene: Cbei_4432: Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3) |
|
Gene: CBY_1712: Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3) |
|
|
|
|
Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3) |
| CRON 93. | |||||||||
| abrB |
*
Clostridium acetobutylicum ATCC 824 Site: position = -108 score = 4.66601 sequence = ATGAAAAAAATTAAAT Gene: CAC3647: Transition state regulatory protein AbrB |
*
Clostridium beijerincki NCIMB 8052 Site: position = -95 score = 4.11479 sequence = TTATAAATATTTAAAA Gene: Cbei_4885: Transition state regulatory protein AbrB |
Gene: CBO0063: Transition state regulatory protein AbrB |
|
Gene: CKL_3784: Transition state regulatory protein AbrB |
|
Gene: CPF_0277: Transition state regulatory protein AbrB |
|
Transition state regulatory protein AbrB |
| CRON 94. | |||||||||
| Cbei_2038 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -60 score = 4.66107 sequence = ATTAAAATGATTTAAT Gene: Cbei_2038: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
|
|
|
|
|
|
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
| CRON 95. | |||||||||
| rny |
*
Clostridium acetobutylicum ATCC 824 Site: position = -183 score = 4.1235 sequence = TTGTAAACTCTTTAAT Gene: CAC1816: Ribonuclease Y |
Gene: Cbei_1217: Ribonuclease Y |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -208 score = 4.14026 sequence = ATGAAAAAATATATAA Gene: CBO2404: Ribonuclease Y |
Gene: CBY_0291: Ribonuclease Y |
Gene: CKL_1446: Ribonuclease Y |
*
Clostridium novyi NT Site: position = -223 score = 4.67476 sequence = ATTAAAAAGTTTTTAT Gene: NT01CX_2122: Ribonuclease Y |
Gene: CPF_1926: Ribonuclease Y |
*
Clostridium tetani E88 Site: position = -69 score = 4.11903 sequence = ATAAAAAAATTAATAT Gene: CTC01290: Ribonuclease Y |
Ribonuclease Y |
| CRON 96. | |||||||||
| malH |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -205 score = 4.06774 sequence = AAGAAAAGGTTAACAA Gene: Cbei_0230: Maltose/maltodextrin ABC transporter, periplasmic component |
|
*
Clostridium butyricum 5521 Site: position = -226 score = 4.64232 sequence = TTGTAAAAGTTTACTT Gene: CBY_2940: Maltose/maltodextrin ABC transporter, periplasmic component |
|
|
|
|
Maltose/maltodextrin ABC transporter, periplasmic component |
| malF |
|
Gene: Cbei_0231: Maltose/maltodextrin ABC transporter, permease protein MalF |
|
Gene: CBY_2941: Maltose/maltodextrin ABC transporter, permease protein MalF |
|
|
|
|
Maltose/maltodextrin ABC transporter, permease protein MalF |
| malG |
|
Gene: Cbei_0232: Maltose/maltodextrin ABC transporter, permease protein MalG |
|
Gene: CBY_2942: Maltose/maltodextrin ABC transporter, permease protein MalG |
|
|
|
|
Maltose/maltodextrin ABC transporter, permease protein MalG |
| malQ |
|
Gene: Cbei_0233: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
|
Gene: CBY_2943: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
|
|
|
|
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) |
| CRON 97. | |||||||||
| livH |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_2768: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) Gene: Cbei_5043: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
|
Gene: CBY_0627: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
*
Clostridium kluyveri DSM 555 Site: position = -55 score = 4.39623 sequence = ATGTAAAAATTTATTT Gene: CKL_2743: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
|
|
|
High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
| livM |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_2767: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) Gene: Cbei_5044: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
|
Gene: CBY_0628: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
Gene: CKL_2742: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
|
|
|
Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1) |
| livG |
|
Gene: Cbei_5045: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
|
Gene: CBY_0629: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
Gene: CKL_2741: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
|
|
|
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
| livF |
|
3
Clostridium beijerincki NCIMB 8052 Gene: Cbei_5046: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) Gene: Cbei_2765: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) Gene: Cbei_2766: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
|
Gene: CBY_0630: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
Gene: CKL_2740: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
|
|
|
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1) |
| livK |
|
*2
Clostridium beijerincki NCIMB 8052 Site: position = -225 score = 4.09009 sequence = ATTTTAACGTTAAAAA Site: position = -168 score = 4.08664 sequence = AAGTAAATATTATTAT Gene: Cbei_2769: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) Site: position = -188 score = 4.65267 sequence = ATGATAACGTTTTTAT Site: position = -153 score = 4.11919 sequence = ATATAAAATATTAAAT Gene: Cbei_5042: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) |
|
Gene: CBY_0626: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) |
Gene: CKL_2739: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) |
|
|
|
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) |
| CRON 98. | |||||||||
| CAC2534 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -190 score = 4.0593 sequence = AAGAAAACGTTGTCTT Site: position = -82 score = 4.64316 sequence = TTGAAAAAAATTTAAT Gene: CAC2534: Putative metal-dependent phosphohydrolase |
Gene: Cbei_3051: Putative metal-dependent phosphohydrolase |
|
|
|
|
|
|
Putative metal-dependent phosphohydrolase |
| CRON 99. | |||||||||
| araF |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -186 score = 4.63959 sequence = ATGAAAACGTATTAAT Gene: Cbei_4450: L-arabinose ABC transporter, substrate-binding periplasmic protein (TC 3.A.1.2.2) |
|
|
|
|
|
|
L-arabinose ABC transporter, substrate-binding periplasmic protein (TC 3.A.1.2.2) |
| araG |
|
Gene: Cbei_4449: L-arabinose ABC transporter, ATP-binding protein |
|
|
|
|
|
|
L-arabinose ABC transporter, ATP-binding protein |
| araH |
|
Gene: Cbei_4448: L-arabinose ABC transporter, permease protein (TC 3.A.1.2.2) |
|
|
|
|
|
|
L-arabinose ABC transporter, permease protein (TC 3.A.1.2.2) |
| CRON 100. | |||||||||
| CPF_1716 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -114 score = 4.62849 sequence = AAGAAAACGATTAATT Site: position = -63 score = 4.1582 sequence = TAGTAATCGTTTAAAA Site: position = -48 score = 4.2315 sequence = AAGAAAAAATTAACAA Gene: CPF_1716: PTS system, predicted N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) |
|
PTS system, predicted N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) |
| CPF_1715 |
|
|
|
|
|
|
Gene: CPF_1715: PTS system, predicted N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) |
|
PTS system, predicted N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) |
| CPF_1714 |
|
|
|
|
|
|
Gene: CPF_1714: PTS system, predicted N-acetylgalactosamine-specific IID component (EC 2.7.1.69) |
|
PTS system, predicted N-acetylgalactosamine-specific IID component (EC 2.7.1.69) |
| CRON 101. | |||||||||
| cheY |
Gene: CAC0585: Chemotaxis protein cheY |
*
Clostridium beijerincki NCIMB 8052 Site: position = -132 score = 4.07154 sequence = ATGATAAATTTATTAT Gene: Cbei_4959: Chemotaxis protein cheY |
Gene: CBO1786: Chemotaxis protein cheY |
*
Clostridium butyricum 5521 Site: position = -220 score = 4.63269 sequence = AAGTAAAAGTTTTCAT Site: position = -195 score = 4.57333 sequence = TTGAAAATATTTTTAT Site: position = -84 score = 4.16923 sequence = ATGATAATAATTTATA Gene: CBY_1888: Chemotaxis protein cheY |
Gene: CKL_2207: Chemotaxis protein cheY |
|
|
|
Chemotaxis protein cheY |
| cheX |
Gene: CAC0586: Chemotaxis protein CheX |
Gene: Cbei_4958: Chemotaxis protein CheX |
Gene: CBO1787: Chemotaxis protein CheX |
Gene: CBY_1887: Chemotaxis protein CheX |
Gene: CKL_2206: Chemotaxis protein CheX |
|
|
|
Chemotaxis protein CheX |
| CRON 102. | |||||||||
| CPF_1064 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -148 score = 4.63046 sequence = ATGAAAATGTTATCTT Site: position = -76 score = 4.0963 sequence = TTTAAAAAAATTATTA Gene: CPF_1064: Predicted transporter with diguanylate phosphodiesterase EAL domain |
|
Predicted transporter with diguanylate phosphodiesterase EAL domain |
| CRON 103. | |||||||||
| CAC1333 |
Gene: CAC1333: Transcriptional regulator, AraC family |
*
Clostridium beijerincki NCIMB 8052 Site: position = -74 score = 4.63324 sequence = TTTAAAACGTTTAATT Gene: Cbei_4661: Transcriptional regulator, AraC family |
|
|
|
|
|
|
Transcriptional regulator, AraC family |
| CRON 104. | |||||||||
| pflD |
|
|
|
*
Clostridium butyricum 5521 Site: position = -101 score = 4.62467 sequence = TTGTAAACGTTTATTT Gene: CBY_1978: pyruvate formate-lyase |
|
Gene: NT01CX_0385: pyruvate formate-lyase |
|
*
Clostridium tetani E88 Site: position = -40 score = 4.12221 sequence = TTAAAAAGGATTAAAT Gene: CTC00936: pyruvate formate-lyase |
pyruvate formate-lyase |
| pflC |
|
|
|
Gene: CBY_1977: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
Gene: NT01CX_0384: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|
Gene: CTC00937: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
| CRON 105. | |||||||||
| yrvJ |
|
|
|
|
*
Clostridium kluyveri DSM 555 Site: position = -174 score = 4.62311 sequence = TTAAAAAAGTTTTAAT Gene: CKL_0782: N-acetylmuramoyl-L-alanine amidase |
|
|
|
N-acetylmuramoyl-L-alanine amidase |
| CRON 106. | |||||||||
| thlA |
|
|
|
|
|
Gene: NT01CX_0603: Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
|
*
Clostridium tetani E88 Site: position = -113 score = 4.62311 sequence = TTGAAAAATTTTTAAT Gene: CTC00312: Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
| CRON 107. | |||||||||
| CBY_3470 |
|
|
|
Gene: CBY_3470: Predicted N-acetylglucosamine ABC transporter, substrate-binding protein |
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -48 score = 4.61416 sequence = AAGAAAATGTTTACAA Gene: CPF_0556: Predicted N-acetylglucosamine ABC transporter, substrate-binding protein |
|
Predicted N-acetylglucosamine ABC transporter, substrate-binding protein |
| CBY_3467 |
|
|
|
Gene: CBY_3467: Predicted N-acetylglucosamine ABC transporter, permease protein |
|
|
Gene: CPF_0557: Predicted N-acetylglucosamine ABC transporter, permease protein |
|
Predicted N-acetylglucosamine ABC transporter, permease protein |
| CBY_3468 |
|
|
|
Gene: CBY_3468: Predicted N-acetylglucosamine ABC transporter, permease protein |
|
|
Gene: CPF_0558: Predicted N-acetylglucosamine ABC transporter, permease protein |
|
Predicted N-acetylglucosamine ABC transporter, permease protein |
| CRON 108. | |||||||||
| Cbei_3501 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -33 score = 4.62551 sequence = TTGAAAACGTTATATA Gene: Cbei_3501: Predicted carbohydrate ABC transporter, periplasmic substrate-binding protein |
|
|
|
|
|
|
Predicted carbohydrate ABC transporter, periplasmic substrate-binding protein |
| Cbei_3500 |
|
Gene: Cbei_3500: Predicted carbohydrate , permease protein |
|
|
|
|
|
|
Predicted carbohydrate , permease protein |
| Cbei_3499 |
|
Gene: Cbei_3499: Predicted carbohydrate ABC transporter, permease protein |
|
|
|
|
|
|
Predicted carbohydrate ABC transporter, permease protein |
| Cbei_3498 |
|
Gene: Cbei_3498: Hypothetical protein |
|
|
|
|
|
|
Hypothetical protein |
| CRON 109. | |||||||||
| Cbei_4156 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -156 score = 4.13702 sequence = ATAATAACATTTTAAA Gene: Cbei_4156: Zinc protease (EC 3.4.-.-) |
|
|
|
|
|
|
Zinc protease (EC 3.4.-.-) |
| ltaE |
Gene: CAC3420: Low-specificity L-threonine aldolase (EC 4.1.2.5) |
Gene: Cbei_4155: Low-specificity L-threonine aldolase (EC 4.1.2.5) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -52 score = 4.18891 sequence = ATGCAAACTTTTTTAT Gene: CBO2233: Low-specificity L-threonine aldolase (EC 4.1.2.5) |
*
Clostridium butyricum 5521 Site: position = -222 score = 4.61416 sequence = AAGAAAATGTTTACAA Gene: CBY_3247: Low-specificity L-threonine aldolase (EC 4.1.2.5) |
|
|
|
|
Low-specificity L-threonine aldolase (EC 4.1.2.5) |
| CRON 110. | |||||||||
| treB |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -215 score = 4.11156 sequence = TATTAAACATTTTCAA Site: position = -134 score = 4.61104 sequence = TTGTAAACATTTAAAT Gene: Cbei_2320: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) |
Gene: CBO1987: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) |
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -214 score = 4.18855 sequence = ATTTTAAAGTTTAATT Gene: CPF_0541: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) |
|
PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) |
| treA |
|
Gene: Cbei_2321: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: CBO1988: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: CBY_3145: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
|
|
Gene: CPF_0542: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
|
Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
| CRON 111. | |||||||||
| Cbei_4325 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -203 score = 4.61509 sequence = TTGAAAAAATTTTTAT Gene: Cbei_4325: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -32 score = 4.06531 sequence = TATTAAATATTTAAAT Gene: CBO1816: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
*
Clostridium butyricum 5521 Site: position = -232 score = 4.06892 sequence = TTTTAAATATTTATTT Site: position = -64 score = 4.09019 sequence = ATGAAAACAAATATTT Gene: CBY_3649: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
Gene: CKL_1561: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
|
Gene: CPF_2328: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
Gene: CTC01321: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-) |
| CRON 112. | |||||||||
| lacR |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -62 score = 4.61097 sequence = ATGTAAATGTTTAATA Gene: CPF_0765: Transcription regulator of lactose utilization, AraC family |
|
Transcription regulator of lactose utilization, AraC family |
| CRON 113. | |||||||||
| agaN |
|
|
|
*
Clostridium butyricum 5521 Site: position = -58 score = 4.61084 sequence = TTGAAAACAATTTCAA Gene: CBY_1729: Alpha-galactosidase (EC 3.2.1.22) |
|
|
Gene: CPF_0491: Alpha-galactosidase (EC 3.2.1.22) |
|
Alpha-galactosidase (EC 3.2.1.22) |
| CRON 114. | |||||||||
| Cbei_2953 |
|
Gene: Cbei_2953: Methyl-accepting chemotaxis protein |
|
Gene: CBY_4130: Methyl-accepting chemotaxis protein |
|
*
Clostridium novyi NT Site: position = -194 score = 4.36273 sequence = ATATAAATGATTTAAA Site: position = -74 score = 4.59085 sequence = ATGAAAAAGATAATAT Gene: NT01CX_0485: Methyl-accepting chemotaxis protein |
|
|
Methyl-accepting chemotaxis protein |
| CRON 115. | |||||||||
| ispF |
*
Clostridium acetobutylicum ATCC 824 Site: position = -77 score = 4.25261 sequence = TTTAAAACTATTTCTT Gene: CAC0434: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
Gene: Cbei_0297: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
Gene: CBO0066: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
*
Clostridium butyricum 5521 Site: position = -90 score = 4.25288 sequence = ATGTAAATGTTTACCT Gene: CBY_3009: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
Gene: CKL_3774: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
Gene: NT01CX_0736: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
*
Clostridium perfringens ATCC 13124 Site: position = -202 score = 4.09112 sequence = ATATAAAATTTTATAT Gene: CPF_2616: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
Gene: CTC00232: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) |
| CRON 116. | |||||||||
| Cbei_0663 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -234 score = 4.1629 sequence = ATTAAATTGTTTTATA Site: position = -190 score = 4.24891 sequence = ATGAAAATGAATTTTT Site: position = -100 score = 4.0925 sequence = TAGAAAATTATATAAT Gene: Cbei_0663: Hypothetical membrane protein |
|
*
Clostridium butyricum 5521 Site: position = -153 score = 4.59411 sequence = ATGAAAAAAATTAAAA Gene: CBY_2696: Hypothetical membrane protein |
|
|
Gene: CPF_1372: Hypothetical membrane protein |
|
Hypothetical membrane protein |
| CRON 117. | |||||||||
| Cbei_3986 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -59 score = 4.57631 sequence = AAGAAAATGTTTACTT Gene: Cbei_3986: Putative S-layer protein (peptidoglycan anchored) |
|
|
|
Gene: NT01CX_0211: Putative S-layer protein (peptidoglycan anchored) |
|
|
Putative S-layer protein (peptidoglycan anchored) |
| CRON 118. | |||||||||
| CAC0960 |
Gene: CAC0960: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) |
|
|
*
Clostridium butyricum 5521 Site: position = -93 score = 4.58614 sequence = ATGAAAAAGTTAAATA Gene: CBY_2799: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) |
Gene: CKL_1720: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) |
|
|
Gene: CTC00537: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) |
Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-) |
| CRON 119. | |||||||||
| bglA |
Gene: CAC1405: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Gene: Cbei_4669: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
*
Clostridium butyricum 5521 Site: position = -153 score = 4.59627 sequence = ATGTAAACAATTAAAT Gene: CBY_0846: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|
|
|
|
6-phospho-beta-glucosidase (EC 3.2.1.86) |
| CRON 120. | |||||||||
| xylB |
Gene: CAC1344: Ribulokinase (EC 2.7.1.16) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -41 score = 4.5712 sequence = AAGTAAACGATTTAAA Gene: Cbei_4452: Ribulokinase (EC 2.7.1.16) |
|
|
|
|
|
|
Ribulokinase (EC 2.7.1.16) |
| CRON 121. | |||||||||
| CBO2572 |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -49 score = 4.56458 sequence = TTGAAAATAATTAAAT Gene: CBO2572: Malate permease |
|
|
|
|
|
Malate permease |
| CRON 122. | |||||||||
| ytxC |
Gene: CAC2363: Putative sporulation protein YtxC |
Gene: Cbei_1568: Putative sporulation protein YtxC |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -108 score = 4.54862 sequence = TTGAAAAAAATTTCAA Gene: CBO3139: Putative sporulation protein YtxC |
*
Clostridium butyricum 5521 Site: position = -241 score = 4.15161 sequence = TTATAAATATTTTAAA Site: position = -95 score = 4.22154 sequence = ATAAAAAAATTAAAAT Gene: CBY_0558: Putative sporulation protein YtxC |
*
Clostridium kluyveri DSM 555 Site: position = -195 score = 4.10494 sequence = ATTATAATTTTTTAAT Gene: CKL_3197: Putative sporulation protein YtxC |
Gene: NT01CX_1759: Putative sporulation protein YtxC |
Gene: CPF_2147: Putative sporulation protein YtxC |
Gene: CTC02287: Putative sporulation protein YtxC |
Putative sporulation protein YtxC |
| CRON 123. | |||||||||
| CBO2472 |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -33 score = 4.55142 sequence = ATGAAAAATTTTACAA Gene: CBO2472: Glutamate/gamma-aminobutyrate antiporter |
|
|
|
|
|
Glutamate/gamma-aminobutyrate antiporter |
| CRON 124. | |||||||||
| CPF_1753 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -50 score = 4.53651 sequence = TTGAAAATATTTATAT Gene: CPF_1753: Putative N-acetylmuramoyl-L-alanine amidase |
Gene: CTC01537: Putative N-acetylmuramoyl-L-alanine amidase |
Putative N-acetylmuramoyl-L-alanine amidase |
| CRON 125. | |||||||||
| ifcA |
|
|
|
|
|
|
|
*
Clostridium tetani E88 Site: position = -39 score = 4.54191 sequence = ATGAAAAAATTAAAAT Gene: CTC01488: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
| CRON 126. | |||||||||
| leuA1 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -192 score = 4.52976 sequence = ATAAAAATGATTAAAT Gene: Cbei_2175: 2-isopropylmalate synthase (EC 2.3.3.13) |
|
|
Gene: CKL_0047: 2-isopropylmalate synthase (EC 2.3.3.13) |
|
|
|
2-isopropylmalate synthase (EC 2.3.3.13) |
| CRON 127. | |||||||||
| ygeW |
|
Gene: Cbei_1968: Putative ornithine carbamoyltransferase (EC 2.1.3.3) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -208 score = 4.31596 sequence = ATTAAAATGATAAATT Gene: CBO2885: Putative ornithine carbamoyltransferase (EC 2.1.3.3) |
|
|
|
|
|
Putative ornithine carbamoyltransferase (EC 2.1.3.3) |
| ygfK |
|
|
Gene: CBO2884: Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
|
|
|
|
|
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) |
| CBO2883 |
|
|
Gene: CBO2883: Putative deaminase |
|
|
|
|
|
Putative deaminase |
| ygeY |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -245 score = 4.54448 sequence = TTGAAAATATTTACAA Site: position = -184 score = 4.15014 sequence = ATAAAAAATTTTTTTT Gene: Cbei_1967: Putative deacetylase |
Gene: CBO2882: Putative deacetylase |
|
|
Gene: NT01CX_1618: Putative deacetylase |
|
|
Putative deacetylase |
| yqeA |
|
Gene: Cbei_1969: Carbamate kinase (EC 2.7.2.2) |
|
|
|
|
|
|
Carbamate kinase (EC 2.7.2.2) |
| CRON 128. | |||||||||
| yjiM |
|
|
*2
Clostridium botulinum A str. ATCC 3502 Site: position = -85 score = 4.53776 sequence = ATGAAATAGATTTAAT Gene: CBO3245: 2-hydroxyglutaryl-CoA dehydratase, beta subunit family protein Gene: CBO3244: 2-hydroxyglutaryl-CoA dehydratase, beta subunit family protein |
|
|
|
|
|
2-hydroxyglutaryl-CoA dehydratase, beta subunit family protein |
| CRON 129. | |||||||||
| galM |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -55 score = 4.16255 sequence = ATGTAAATGTATACTA Gene: Cbei_4465: Aldose 1-epimerase (EC 5.1.3.3) |
|
*
Clostridium butyricum 5521 Site: position = -118 score = 4.13892 sequence = TTAAAAAGGTTTTCAA Site: position = -32 score = 4.5392 sequence = ATGAAAACTATTACAA Gene: CBY_4133: Aldose 1-epimerase (EC 5.1.3.3) |
|
|
|
|
Aldose 1-epimerase (EC 5.1.3.3) |
| cbgA |
|
Gene: Cbei_1236: Beta-galactosidase (EC 3.2.1.23) |
|
Gene: CBY_4134: Beta-galactosidase (EC 3.2.1.23) |
|
|
|
|
Beta-galactosidase (EC 3.2.1.23) |
| CRON 130. | |||||||||
| Cbei_2423 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -27 score = 4.53697 sequence = ATGAAAATATTATAAT Gene: Cbei_2423: Predicted ABC transporter, periplasmic protein |
|
|
|
|
|
|
Predicted ABC transporter, periplasmic protein |
| CRON 131. | |||||||||
| bglC |
|
Gene: Cbei_4643: Aryl-phospho-beta-D-glucosidase (EC3.2.1.86) |
|
*
Clostridium butyricum 5521 Site: position = -34 score = 4.52807 sequence = ATGAAATCGATTTAAA Gene: CBY_0850: Aryl-phospho-beta-D-glucosidase (EC3.2.1.86) |
|
|
|
|
Aryl-phospho-beta-D-glucosidase (EC3.2.1.86) |
| CRON 132. | |||||||||
| pykA |
*
Clostridium acetobutylicum ATCC 824 Site: position = -168 score = 4.24567 sequence = ATTAAAAATTTTATAA Gene: CAC2660: Pyruvate carboxyl transferase (EC 6.4.1.1) |
Gene: Cbei_4960: Pyruvate carboxyl transferase (EC 6.4.1.1) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -189 score = 4.19671 sequence = TAGTAAATTTTTAAAT Site: position = -104 score = 4.53594 sequence = TTGAAAAAATTTTATA Gene: CBO3312: Pyruvate carboxyl transferase (EC 6.4.1.1) |
Gene: CBY_0816: Pyruvate carboxyl transferase (EC 6.4.1.1) |
*
Clostridium kluyveri DSM 555 Site: position = -127 score = 4.1471 sequence = ATAAAAAAAATAAAAT Site: position = -107 score = 4.32664 sequence = TTGAAATAATTTTAAT Gene: CKL_0447: Pyruvate carboxyl transferase (EC 6.4.1.1) |
Gene: NT01CX_0659: Pyruvate carboxyl transferase (EC 6.4.1.1) |
|
Gene: CTC02224: Pyruvate carboxyl transferase (EC 6.4.1.1) |
Pyruvate carboxyl transferase (EC 6.4.1.1) |
| CRON 133. | |||||||||
| arcD |
|
|
*
Clostridium botulinum A str. ATCC 3502 Site: position = -219 score = 4.12158 sequence = AAAAAAACATTTTATA Site: position = -145 score = 4.05306 sequence = TTAAAAATGTATTTAT Site: position = -67 score = 4.53126 sequence = ATGAAAATTTTTTATT Gene: CBO0529: Putative arginine/ornithine antiporter |
|
|
|
|
|
Putative arginine/ornithine antiporter |
| CRON 134. | |||||||||
| cggR |
*
Clostridium acetobutylicum ATCC 824 Site: position = -117 score = 4.46898 sequence = ATGAAAAAATTATATT Gene: CAC0708: Central glycolytic genes regulator |
Gene: Cbei_0596: Central glycolytic genes regulator |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -125 score = 4.51439 sequence = TTGAAAAATTTTAAAA Gene: CBO0225: Central glycolytic genes regulator |
*
Clostridium butyricum 5521 Site: position = -122 score = 4.13485 sequence = TTTTAAATAATTAAAA Gene: CBY_4067: Central glycolytic genes regulator |
|
*
Clostridium novyi NT Site: position = -111 score = 4.09098 sequence = TTGATAACTTTTTTTA Gene: NT01CX_1403: Central glycolytic genes regulator |
*
Clostridium perfringens ATCC 13124 Site: position = -112 score = 4.3571 sequence = AAGAAAAAATTTTCTA Gene: CPF_1512: Central glycolytic genes regulator |
Gene: CTC00377: Central glycolytic genes regulator |
Central glycolytic genes regulator |
| gapC |
Gene: CAC0709: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: Cbei_0597: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: CBO0226: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: CBY_4068: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: CKL_3382: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: NT01CX_1404: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: CPF_1511: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
Gene: CTC00378: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
| pgk |
Gene: CAC0710: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: Cbei_0598: Phosphoglycerate kinase (EC 2.7.2.3) |
|
Gene: CBY_4069: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: CKL_3381: Phosphoglycerate kinase (EC 2.7.2.3) |
|
Gene: CPF_1510: Phosphoglycerate kinase (EC 2.7.2.3) |
Gene: CTC00379: Phosphoglycerate kinase (EC 2.7.2.3) |
Phosphoglycerate kinase (EC 2.7.2.3) |
| tpi |
Gene: CAC0711: Triosephosphate isomerase (EC 5.3.1.1) |
|
|
|
Gene: CKL_3380: Triosephosphate isomerase (EC 5.3.1.1) |
|
|
Gene: CTC00380: Triosephosphate isomerase (EC 5.3.1.1) |
Triosephosphate isomerase (EC 5.3.1.1) |
| pgm |
Gene: CAC0712: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) |
|
|
|
Gene: CKL_3379: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) |
|
|
Gene: CTC00381: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) |
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) |
| eno |
Gene: CAC0713: Enolase (EC 4.2.1.11) |
|
|
|
Gene: CKL_3378: Enolase (EC 4.2.1.11) |
|
|
Gene: CTC00382: Enolase (EC 4.2.1.11) |
Enolase (EC 4.2.1.11) |
| CRON 135. | |||||||||
| Cbei_3872 |
|
*2
Clostridium beijerincki NCIMB 8052 Site: position = -48 score = 4.5206 sequence = TTAAAAAAGTTTTTAT Gene: Cbei_4912: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) Site: position = -48 score = 4.32211 sequence = ATAAAAACTTTTTTAT Gene: Cbei_3872: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
|
|
|
|
|
|
PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) |
| Cbei_3871 |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4911: PTS system, mannose-specific IID component (EC 2.7.1.69) Gene: Cbei_3871: PTS system, mannose-specific IID component (EC 2.7.1.69) |
|
|
|
|
|
|
PTS system, mannose-specific IID component (EC 2.7.1.69) |
| CRON 136. | |||||||||
| Cbei_2187 |
|
Gene: Cbei_2187: PTS system, cellobiose-specific IIB component |
|
*
Clostridium butyricum 5521 Site: position = -77 score = 4.51188 sequence = ATGATAATGTTTATAT Gene: CBY_1741: PTS system, cellobiose-specific IIB component |
|
|
|
|
PTS system, cellobiose-specific IIB component |
| CRON 137. | |||||||||
| CAC0535 |
*
Clostridium acetobutylicum ATCC 824 Site: position = -156 score = 4.38499 sequence = ATAAAAAAATTTTAAA Gene: CAC0535: Metal-dependent hydrolase of the beta-lactamase superfamily II |
|
*3
Clostridium botulinum A str. ATCC 3502 Site: position = -83 score = 4.07455 sequence = ATTTAAAAAATATAAA Gene: CBO0522: Metal-dependent hydrolase of the beta-lactamase superfamily II Gene: CBO1062: Metal-dependent hydrolase of the beta-lactamase superfamily II Site: position = -133 score = 4.14701 sequence = TAGAAAATTTTTAATA Gene: CBO2288: Metal-dependent hydrolase of the beta-lactamase superfamily II |
Gene: CBY_0562: Metal-dependent hydrolase of the beta-lactamase superfamily II |
*2
Clostridium kluyveri DSM 555 Gene: CKL_3641: Metal-dependent hydrolase of the beta-lactamase superfamily II Site: position = -133 score = 4.51439 sequence = TTAAAAAAGTTTAAAA Gene: CKL_2838: Metal-dependent hydrolase of the beta-lactamase superfamily II |
Gene: NT01CX_2088: Metal-dependent hydrolase of the beta-lactamase superfamily II |
Gene: CPF_1168: Metal-dependent hydrolase of the beta-lactamase superfamily II |
*
Clostridium tetani E88 Site: position = -155 score = 4.13592 sequence = TTTAAAACTATTATTT Gene: CTC02162: Metal-dependent hydrolase of the beta-lactamase superfamily II |
Metal-dependent hydrolase of the beta-lactamase superfamily II |
| CRON 138. | |||||||||
| CBO0270 |
|
|
*2
Clostridium botulinum A str. ATCC 3502 Site: position = -232 score = 4.14058 sequence = ATTAAAAAATTATTTT Site: position = -174 score = 4.50383 sequence = TTGAAAAAAATTATAT Gene: CBO0270: Transcription regulator, RpiR family Gene: CBO0269: Transcription regulator, RpiR family |
|
|
|
|
|
Transcription regulator, RpiR family |
| CRON 139. | |||||||||
| Cbei_5019 |
|
*2
Clostridium beijerincki NCIMB 8052 Site: position = -60 score = 4.50026 sequence = ATGAAAACGTATATAT Gene: Cbei_5019: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69) Site: position = -35 score = 4.11535 sequence = AAGAAAATTATAAAAT Gene: Cbei_4806: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69) |
Gene: CBO0288: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69) |
|
|
|
|
|
PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69) |
| glvA2 |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4805: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) Gene: Cbei_5018: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
Gene: CBO0289: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
|
|
|
|
|
Maltose-6'-phosphate glucosidase (EC 3.2.1.122) |
| Cbei_4804 |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_5017: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) Gene: Cbei_4804: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) |
Gene: CBO0290: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) |
|
|
|
|
|
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69) |
| CRON 140. | |||||||||
| CKL_0783 |
|
|
|
|
*
Clostridium kluyveri DSM 555 Site: position = -205 score = 4.19337 sequence = TTATAAAAATTTTAAA Site: position = -177 score = 4.24277 sequence = ATGAAAAAATATAAAA Site: position = -142 score = 4.16694 sequence = TAAAAAATGTTATAAT Gene: CKL_0783: Hypothetical protein |
|
|
|
Hypothetical protein |
| aroF |
Gene: CAC0892: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
*
Clostridium beijerincki NCIMB 8052 Site: position = -223 score = 4.14204 sequence = ATGCAAAAATTTTATA Gene: Cbei_4577: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
*
Clostridium botulinum A str. ATCC 3502 Site: position = -101 score = 4.5366 sequence = ATTTAAAAGTTTAAAA Gene: CBO1472: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
*
Clostridium butyricum 5521 Site: position = -92 score = 4.1106 sequence = CTTTAAAAGTTTAAAT Gene: CBY_1585: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
Gene: CKL_0784: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
|
Gene: CPF_0687: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
Gene: CTC01618: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54) |
| tyrA |
Gene: CAC0893: Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) |
|
|
|
Gene: CKL_0785: Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) |
|
|
|
Prephenate and/or arogenate dehydrogenase (unknown specificity) (EC 1.3.1.12)(EC 1.3.1.43) |
| aroB |
Gene: CAC0894: 3-dehydroquinate synthase (EC 4.2.3.4) |
Gene: Cbei_4576: 3-dehydroquinate synthase (EC 4.2.3.4) |
|
Gene: CBY_1586: 3-dehydroquinate synthase (EC 4.2.3.4) |
Gene: CKL_0786: 3-dehydroquinate synthase (EC 4.2.3.4) |
Gene: NT01CX_0625: 3-dehydroquinate synthase (EC 4.2.3.4) |
Gene: CPF_0688: 3-dehydroquinate synthase (EC 4.2.3.4) |
Gene: CTC01620: 3-dehydroquinate synthase (EC 4.2.3.4) |
3-dehydroquinate synthase (EC 4.2.3.4) |
| aroA |
Gene: CAC0895: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: Cbei_4575: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: CBO1473: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: CBY_1587: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: CKL_0787: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: NT01CX_0624: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: CPF_0689: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
Gene: CTC01617: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
| aroC |
Gene: CAC0896: Chorismate synthase (EC 4.2.3.5) |
Gene: Cbei_4574: Chorismate synthase (EC 4.2.3.5) |
|
Gene: CBY_1588: Chorismate synthase (EC 4.2.3.5) |
Gene: CKL_0788: Chorismate synthase (EC 4.2.3.5) |
Gene: NT01CX_0623: Chorismate synthase (EC 4.2.3.5) |
Gene: CPF_0690: Chorismate synthase (EC 4.2.3.5) |
|
Chorismate synthase (EC 4.2.3.5) |
| pheA |
|
Gene: Cbei_4573: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain |
|
Gene: CBY_1589: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain |
Gene: CKL_0789: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain |
|
|
|
Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain |
| aroE |
Gene: CAC0897: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) |
Gene: Cbei_4572: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) |
|
Gene: CBY_1590: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) |
Gene: CKL_0790: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) |
Gene: NT01CX_0621: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) |
|
|
Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) |
| aroK |
Gene: CAC0898: Shikimate kinase I (EC 2.7.1.71) |
Gene: Cbei_4571: Shikimate kinase I (EC 2.7.1.71) |
|
Gene: CBY_1591: Shikimate kinase I (EC 2.7.1.71) |
Gene: CKL_0791: Shikimate kinase I (EC 2.7.1.71) |
Gene: NT01CX_0620: Shikimate kinase I (EC 2.7.1.71) |
|
|
Shikimate kinase I (EC 2.7.1.71) |
| CPF_0686 |
|
|
|
|
|
|
*
Clostridium perfringens ATCC 13124 Site: position = -47 score = 4.07616 sequence = TTAAAAAAGTTTAGAA Gene: CPF_0686: Hypothetical protein |
|
Hypothetical protein |
| CRON 141. | |||||||||
| nanE |
|
|
|
*
Clostridium butyricum 5521 Site: position = -162 score = 4.11921 sequence = AAGAAAAAAATAACTT Site: position = -66 score = 4.5813 sequence = TTGAAAATATTTTCAA Gene: CBY_0842: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) |
|
|
Gene: CPF_0177: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) |
|
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) |
| nanA |
|
|
|
Gene: CBY_0841: N-acetylneuraminate lyase (EC 4.1.3.3) |
|
|
Gene: CPF_0178: N-acetylneuraminate lyase (EC 4.1.3.3) |
|
N-acetylneuraminate lyase (EC 4.1.3.3) |
| CBY_0840 |
|
|
|
Gene: CBY_0840: Predicted sialic acid transporter |
|
|
Gene: CPF_0179: Predicted sialic acid transporter |
|
Predicted sialic acid transporter |
| CBY_0839 |
|
|
|
Gene: CBY_0839: Conserved hypothetical protein |
|
|
Gene: CPF_0180: Conserved hypothetical protein |
|
Conserved hypothetical protein |
| nanK |
|
|
|
Gene: CBY_0838: N-acetylmannosamine kinase (EC 2.7.1.60) |
|
|
Gene: CPF_0181: N-acetylmannosamine kinase (EC 2.7.1.60) |
|
N-acetylmannosamine kinase (EC 2.7.1.60) |
| siaR |
|
|
|
Gene: CBY_0837: Transcription regulator of sialic acid utilization, RpiR family |
|
|
Gene: CPF_0182: Transcription regulator of sialic acid utilization, RpiR family |
|
Transcription regulator of sialic acid utilization, RpiR family |
| CRON 142. | |||||||||
| atoE |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -194 score = 4.58521 sequence = TTGAAAAAATTTTCTT Gene: Cbei_3821: Short chain fatty acids transporter |
|
|
|
|
|
|
Short chain fatty acids transporter |
| hbd2 |
|
Gene: Cbei_3820: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
|
|
Gene: CKL_2795: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
|
|
|
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
| ydiF |
|
*3
Clostridium beijerincki NCIMB 8052 Site: position = -112 score = 4.07941 sequence = TTTAAAAAAATAATAT Gene: Cbei_2040: Coenzyme A transferase Gene: Cbei_3819: Coenzyme A transferase Site: position = -226 score = 4.66023 sequence = ATGTAAATGTTTACTT Gene: Cbei_3351: Coenzyme A transferase |
|
|
|
|
|
|
Coenzyme A transferase |
| yxjC |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_3350: Predicted D-beta-hydroxybutyrate permease Gene: Cbei_2041: Predicted D-beta-hydroxybutyrate permease |
|
|
|
|
|
|
Predicted D-beta-hydroxybutyrate permease |
| htd2 |
|
*
Clostridium beijerincki NCIMB 8052 Site: position = -58 score = 4.11461 sequence = TTGAAAATACTTACAA Gene: Cbei_3349: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
|
|
Gene: CKL_3022: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
|
|
|
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) |
| CRON 143. | |||||||||
| uxaB |
*
Clostridium acetobutylicum ATCC 824 Site: position = -101 score = 3.91925 sequence = ATATAAAAGAATACAA Gene: CAC0695: Altronate oxidoreductase (EC 1.1.1.58) |
*2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_1833: Altronate oxidoreductase (EC 1.1.1.58) Site: position = -261 score = 4.08388 sequence = ATATAAAATTTTAATT Site: position = -157 score = 3.90758 sequence = AAATAAACTTTTACTT Site: position = -86 score = 3.9579 sequence = ATTAAAATGATAGCAT Gene: Cbei_1838: Altronate oxidoreductase (EC 1.1.1.58) |
|
*
Clostridium butyricum 5521 Site: position = -150 score = 4.15632 sequence = TTGAAAATATTAATTA Site: position = -40 score = 4.06942 sequence = ATTTAAATTATTATAT Gene: CBY_0247: Altronate oxidoreductase (EC 1.1.1.58) |
|
|
|
|
Altronate oxidoreductase (EC 1.1.1.58) |
| uxaA |
Gene: CAC0696: Altronate hydrolase (EC 4.2.1.7) |
Gene: Cbei_1839: Altronate hydrolase (EC 4.2.1.7) |
|
Gene: CBY_0246: Altronate hydrolase (EC 4.2.1.7) |
|
|
|
|
Altronate hydrolase (EC 4.2.1.7) |
| kduD |
|
|
|
Gene: CBY_0245: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) |
|
|
|
|
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) |
| uxaC |
*
Clostridium acetobutylicum ATCC 824 Site: position = -335 score = 3.89784 sequence = AAATAAAAATTTATAA Gene: CAC0692: Uronate isomerase (EC 5.3.1.12) |
*3
Clostridium beijerincki NCIMB 8052 Site: position = -254 score = 4.64795 sequence = AAGAAAAAGTTTATAT Site: position = -99 score = 4.07951 sequence = ATAATAAAGTTATCAA Gene: Cbei_1832: Uronate isomerase (EC 5.3.1.12) Site: position = -37 score = 4.04626 sequence = ATATAAAATATTTATT Gene: Cbei_4082: Uronate isomerase (EC 5.3.1.12) Site: position = -129 score = 4.02248 sequence = AAGAAAACGTTATAGT Gene: Cbei_4657: Uronate isomerase (EC 5.3.1.12) |
|
|
|
|
|
|
Uronate isomerase (EC 5.3.1.12) |
| uxuT |
|
2
Clostridium beijerincki NCIMB 8052 Gene: Cbei_4081: Predicted oligogalacturonide transporter Gene: Cbei_4656: Predicted oligogalacturonide transporter |
|
|
|
|
|
|
Predicted oligogalacturonide transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |