Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ptnD gene

Properties
Regulog: CcpA - Clostridia-1
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Built upon 436 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -321
Score: 4.63959
Sequence: ATGAAAACGTATTAAT
Locus tag: CAP0066
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: CAP0067
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: CAP0068
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD -321 4.6 ATGAAAACGTATTAAT CAP0066
Clostridium beijerincki NCIMB 8052
Position: -374
Score: 4.1437
Sequence: ATAAAAATTATTTTAT
Locus tag: Cbei_0711
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: Cbei_0712
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: Cbei_0713
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD -374 4.1 ATAAAAATTATTTTAT Cbei_0711
Clostridium botulinum A str. ATCC 3502
Position: -279
Score: 3.93449
Sequence: TATCAAATGTTTTAAA
Locus tag: CBO2845
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnD -279 3.9 TATCAAATGTTTTAAA CBO2845
Clostridium butyricum 5521
Position: -370
Score: 4.16339
Sequence: ATGAAAATAAATTAAA
Locus tag: CBY_1459
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: CBY_1460
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: CBY_1461
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD -370 4.2 ATGAAAATAAATTAAA CBY_1459
Clostridium perfringens ATCC 13124
Position: -235
Score: 4.50945
Sequence: TTGAAAATTTTTTAAA
Locus tag: CPF_0818
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: CPF_0819
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: CPF_0820
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
ptnA-manY-ptnD -235 4.5 TTGAAAATTTTTTAAA CPF_0818