Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Clostridium acetobutylicum ATCC 824

Properties
Regulator type: Transcription factor
TF locus tag: CAC3037
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Clostridia-1
Statistics of regulated genes:
- Genes 161
- Operons 92
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 436 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -154
Score: 4.7
Sequence: ATGAAAATGTTATCAT
Locus tag: CAC0422
Name: licT
Funciton: Beta-glucoside bgl operon antiterminator, BglG family
CAC0422
licT
Beta-glucoside bgl operon antiterminator, BglG family
Position: -72
Score: 4.2
Sequence: TAAAAAACGTTATTAT
Locus tag: CAC2372
Name: sspA
Funciton: Small acid-soluble spore protein beta
Locus tag: CAC2371
Name: null
Funciton: Methyltransferase (EC 2.1.1.-)
Locus tag: CAC2370
Name: hslO
Funciton: Chaperonin
CAC2372
sspA
Small acid-soluble spore protein beta
CAC2371
Methyltransferase (EC 2.1.1.-)
CAC2370
hslO
Chaperonin
Position: -45
Score: 4.9
Sequence: ATGTAAACGATTTAAT
Locus tag: CAC3672
Name: msmE
Funciton: Multiple sugar ABC transporter, substrate-binding protein MsmE
Locus tag: CAC3671
Name: msmF
Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
Locus tag: CAC3670
Name: msmG
Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
CAC3672
msmE
Multiple sugar ABC transporter, substrate-binding protein MsmE
CAC3671
msmF
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
CAC3670
msmG
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
Position: -308
Score: 4.6
Sequence: ATGATAATGTTTTCAA
Position: -33
Score: 4.3
Sequence: ATAAAAAATATTTAAT
Locus tag: CAC3683
Name: pbp
Funciton: Penicillin-binding protein
CAC3683
pbp
Penicillin-binding protein
Position: -261
Score: 4.3
Sequence: TTGAAAACGATTGTAT
Position: -203
Score: 3.9
Sequence: AAATAAACATTAAAAT
Locus tag: CAC3500
Name: null
Funciton: Anaerobic dicarboxylate transport protein
Locus tag: CAC3499
Name: frlC
Funciton: Predicted isomerase
Locus tag: CAC3498
Name: frlD
Funciton: Fructoselysine kinase (EC 2.7.1.-)
CAC3500
Anaerobic dicarboxylate transport protein
CAC3499
frlC
Predicted isomerase
CAC3498
frlD
Fructoselysine kinase (EC 2.7.1.-)
Position: -165
Score: 4.2
Sequence: TTGTTAACGATAACAA
Locus tag: CAC0812
Name: pelL
Funciton: Predicted pectate lyase related protein, secreted
Locus tag: CAC0813
Name: CAC0813
Funciton: Hypothetical protein
CAC0812
pelL
Predicted pectate lyase related protein, secreted
CAC0813
CAC0813
Hypothetical protein
Position: -102
Score: 4.2
Sequence: ATGTATACGATTTCTT
Position: -38
Score: 4
Sequence: AAGAAAAAATATTATA
Locus tag: CAC1084
Name: bglC
Funciton: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Locus tag: CAC1085
Name: xylS
Funciton: Alpha-xylosidase (EC 3.2.1.177)
CAC1084
bglC
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
CAC1085
xylS
Alpha-xylosidase (EC 3.2.1.177)
Position: -197
Score: 4.1
Sequence: TTTAATACGATTACAT
Locus tag: CAC0635
Name: CAC0635
Funciton: Hypothetical protein
CAC0635
CAC0635
Hypothetical protein
Position: -259
Score: 4.1
Sequence: AAGATATCGTTTTCAA
Position: -124
Score: 3.9
Sequence: AAAATAATGTTATAAT
Locus tag: CAC0436
Name: yxkH
Funciton: Possible polysaccharide deacetylase
CAC0436
yxkH
Possible polysaccharide deacetylase
Position: -261
Score: 4.4
Sequence: TTGATAACGTTATCTT
Locus tag: CAC1044
Name: CAC1044
Funciton: putative oxidoreductase
CAC1044
CAC1044
putative oxidoreductase
Position: 27
Score: 4
Sequence: ATAAAAAAAATAAATT
Locus tag: CAC0270
Name: CAC0270
Funciton: Hypothetical protein
CAC0270
CAC0270
Hypothetical protein
Position: -78
Score: 4.2
Sequence: TATAAAAAGATTATAA
Locus tag: CAC3037
Name: ccpA
Funciton: Catabolite control protein A, LacI family
CAC3037
ccpA
Catabolite control protein A, LacI family
Position: -86
Score: 4.1
Sequence: TTGAAAATGATACTAT
Locus tag: CAC2955
Name: lacR
Funciton: Lactose phosphotransferase system repressor lacR
CAC2955
lacR
Lactose phosphotransferase system repressor lacR
Position: -38
Score: 4.4
Sequence: AAGTAAAAAATTTAAT
Locus tag: CAC2954
Name: lacA
Funciton: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
Locus tag: CAC2953
Name: lacB
Funciton: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
Locus tag: CAC2952
Name: agaY
Funciton: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
Locus tag: CAC2951
Name: lacC
Funciton: Tagatose-6-phosphate kinase (EC 2.7.1.144)
Locus tag: CAC2950
Name: lacR
Funciton: Lactose phosphotransferase system repressor lacR
CAC2954
lacA
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
CAC2953
lacB
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
CAC2952
agaY
Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
CAC2951
lacC
Tagatose-6-phosphate kinase (EC 2.7.1.144)
CAC2950
lacR
Lactose phosphotransferase system repressor lacR
Position: -134
Score: 4.1
Sequence: ATGTAAACGAAAACAA
Position: -77
Score: 4.3
Sequence: TAGAAAACGATAACTA
Position: -32
Score: 4.2
Sequence: ATAAAAATTATTTAAA
Locus tag: CAC2966
Name: lacR
Funciton: Lactose phosphotransferase system repressor lacR
Locus tag: CAC2965
Name: lacF
Funciton: PTS system, lactose-specific IIA component (EC 2.7.1.69)
Locus tag: CAC2964
Name: lacE
Funciton: PTS system, lactose-specific IIBC component (EC 2.7.1.69)
Locus tag: CAC2963
Name: lacG
Funciton: 6-phospho-beta-galactosidase (EC 3.2.1.85)
CAC2966
lacR
Lactose phosphotransferase system repressor lacR
CAC2965
lacF
PTS system, lactose-specific IIA component (EC 2.7.1.69)
CAC2964
lacE
PTS system, lactose-specific IIBC component (EC 2.7.1.69)
CAC2963
lacG
6-phospho-beta-galactosidase (EC 3.2.1.85)
Position: -126
Score: 4.6
Sequence: ATTAAAATGATTAAAA
Locus tag: CAC2833
Name: sdaR
Funciton: Sugar diacid utilization regulator SdaR
CAC2833
sdaR
Sugar diacid utilization regulator SdaR
Position: -101
Score: 3.9
Sequence: ATATAAAAGAATACAA
Locus tag: CAC0695
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Locus tag: CAC0696
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
CAC0695
uxaB
Altronate oxidoreductase (EC 1.1.1.58)
CAC0696
uxaA
Altronate hydrolase (EC 4.2.1.7)
Position: -118
Score: 4.1
Sequence: ATTAAAATATTATTAA
Locus tag: CAC1457
Name: null
Funciton: PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69)
Locus tag: CAC1458
Name: null
Funciton: PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69)
Locus tag: CAC1459
Name: null
Funciton: PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69)
Locus tag: CAC1460
Name: null
Funciton: PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69)
Locus tag: CAC1461
Name: null
Funciton: PTS system, fructose- and mannose-inducible putative EII component
CAC1457
PTS system, fructose- and mannose-inducible IIA component (EC 2.7.1.69)
CAC1458
PTS system, fructose- and mannose-inducible IIB component (EC 2.7.1.69)
CAC1459
PTS system, fructose- and mannose-inducible IIC component (EC 2.7.1.69)
CAC1460
PTS system, fructose- and mannose-inducible IID component (EC 2.7.1.69)
CAC1461
PTS system, fructose- and mannose-inducible putative EII component
Position: -77
Score: 4.3
Sequence: TTTAAAACTATTTCTT
Locus tag: CAC0434
Name: ispF
Funciton: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
CAC0434
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
Position: 49
Score: 4.1
Sequence: AAGAAAACGTTAACAG
Locus tag: CAC1407
Name: bglP
Funciton: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
Locus tag: CAC1408
Name: bglH2
Funciton: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
CAC1407
bglP
PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
CAC1408
bglH2
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Position: -112
Score: 3.9
Sequence: TTGAAAACGTATACCA
Locus tag: CAC0154
Name: mtlA
Funciton: PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
CAC0154
mtlA
PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
Position: -88
Score: 4
Sequence: ATGAAATCACTTTCAT
Locus tag: CAC0019
Name: null
Funciton: Transcriptional regulator, TetR family
CAC0019
Transcriptional regulator, TetR family
Position: -349
Score: 4
Sequence: AAGAAAATTATAAATT
Locus tag: CAC2613
Name: glcK
Funciton: Glucokinase (EC 2.7.1.2)
CAC2613
glcK
Glucokinase (EC 2.7.1.2)
Position: -94
Score: 4
Sequence: TTGAGAAAGATAAAAT
Position: 7
Score: 4.3
Sequence: ATGAAAAAATATTAAA
Locus tag: CAC1529
Name: arb43
Funciton: Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)
Locus tag: CAC1530
Name: araT
Funciton: Putative arabinoside transporter
CAC1529
arb43
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)
CAC1530
araT
Putative arabinoside transporter
Position: -197
Score: 4.5
Sequence: ATGAAAAAAATTTTAA
Locus tag: CAC1354
Name: null
Funciton: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
CAC1354
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
Position: -219
Score: 4.1
Sequence: TTGTAAACGATGTAAA
Locus tag: CAC1353
Name: nagE
Funciton: PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69)
CAC1353
nagE
PTS system, N-acetylglucosamine-specific IIBC component (EC 2.7.1.69)
Position: -31
Score: 4
Sequence: ATTTTAAAGATAAAAT
Locus tag: CAC0570
Name: gamP
Funciton: PTS system, predicted glucoseamine-specific IICBA component
CAC0570
gamP
PTS system, predicted glucoseamine-specific IICBA component
Position: -32
Score: 4.2
Sequence: TTGTTAAAAATTAAAT
Locus tag: CAC2810
Name: CAC2810
Funciton: Possible secreted glucoamylase
CAC2810
CAC2810
Possible secreted glucoamylase
Position: -41
Score: 3.9
Sequence: TTGAAAACGTTTAGTG
Locus tag: CAC3422
Name: xynT
Funciton: Xyloside transporter XynT
CAC3422
xynT
Xyloside transporter XynT
Position: 3
Score: 4.1
Sequence: TTTAAAAAATTATTTT
Locus tag: CAC3427
Name: ptgA
Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69)
CAC3427
ptgA
PTS system, glucose-specific IIA component (EC 2.7.1.69)
Position: -69
Score: 4.4
Sequence: TTGAAAAAGTTTGTAT
Position: -35
Score: 4.4
Sequence: ATGTAAATAATTACAA
Locus tag: CAC3451
Name: xynT
Funciton: Xyloside transporter XynT
Locus tag: CAC3452
Name: xynD
Funciton: Beta-xylosidase (EC 3.2.1.37)
CAC3451
xynT
Xyloside transporter XynT
CAC3452
xynD
Beta-xylosidase (EC 3.2.1.37)
Position: -147
Score: 4.3
Sequence: TTGTAAATTATTAAAA
Locus tag: CAC0538
Name: manB
Funciton: Beta-mannanase ManB-like enzyme
CAC0538
manB
Beta-mannanase ManB-like enzyme
Position: -58
Score: 4.2
Sequence: ATAAAAACTTTATAAA
Locus tag: CAC0539
Name: manB
Funciton: Beta-mannanase ManB-like enzyme
Locus tag: CAC0540
Name: manB
Funciton: Beta-mannanase ManB-like enzyme
CAC0539
manB
Beta-mannanase ManB-like enzyme
CAC0540
manB
Beta-mannanase ManB-like enzyme
Position: -69
Score: 4.3
Sequence: ATGTATATGTTTTCAT
Locus tag: CAC3669
Name: null
Funciton: Transcriptional regulator, MarR family
Locus tag: CAC3668
Name: null
Funciton: Predicted transporter protein
CAC3669
Transcriptional regulator, MarR family
CAC3668
Predicted transporter protein
Position: -168
Score: 4.2
Sequence: ATTAAAAATTTTATAA
Locus tag: CAC2660
Name: pykA
Funciton: Pyruvate carboxyl transferase (EC 6.4.1.1)
CAC2660
pykA
Pyruvate carboxyl transferase (EC 6.4.1.1)
Position: -155
Score: 4.6
Sequence: ATGAAAAAAATTACAT
Locus tag: CAC0987
Name: null
Funciton: Hypothetical protein
Locus tag: CAC0988
Name: null
Funciton: Probably membrane protein
CAC0987
Hypothetical protein
CAC0988
Probably membrane protein
Position: 120
Score: 4.6
Sequence: ATGAAAACGATATCTA
Locus tag: CAC2252
Name: xylS2
Funciton: Alpha-xylosidase (EC 3.2.1.177)
CAC2252
xylS2
Alpha-xylosidase (EC 3.2.1.177)
Position: -37
Score: 4.6
Sequence: ATAAAAAAGTTTAAAA
Locus tag: CAC0767
Name: null
Funciton: Fe-S oxidoreductase
CAC0767
Fe-S oxidoreductase
Position: -193
Score: 4.3
Sequence: TTAAAAAAGATTAATA
Position: -124
Score: 4.3
Sequence: AAGTAAACGATAATAT
Locus tag: CAC2547
Name: null
Funciton: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
CAC2547
Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
Position: -66
Score: 3.9
Sequence: ATAATAAAATTATAAT
Locus tag: CAC0263
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
CAC0263
serB
Phosphoserine phosphatase (EC 3.1.3.3)
Position: 20
Score: 4.2
Sequence: AAGAAAAAGCTTACTT
Position: 86
Score: 4.2
Sequence: AAGTAATCGTTTTCAA
Locus tag: CAP0098
Name: amyA
Funciton: Alpha-amylase (EC 3.2.1.1)
CAP0098
amyA
Alpha-amylase (EC 3.2.1.1)
Position: 55
Score: 4.8
Sequence: ATGAAAATGTTTTCTT
Locus tag: CAC2959
Name: galK
Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: CAC2960
Name: galE
Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
Locus tag: CAC2961
Name: galT
Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Locus tag: CAC2962
Name: galR
Funciton: Transcription regulator of galactose utilization, LacI family
CAC2959
galK
Galactokinase (EC 2.7.1.6)
CAC2960
galE
UDP-glucose 4-epimerase (EC 5.1.3.2)
CAC2961
galT
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
CAC2962
galR
Transcription regulator of galactose utilization, LacI family
Position: 112
Score: 4.5
Sequence: TAGAAAACGTTATAAA
Locus tag: CAC0176
Name: oppA
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Locus tag: CAC0177
Name: oppB
Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Locus tag: CAC0178
Name: oppC
Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
Locus tag: CAC0179
Name: oppD
Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: CAC0180
Name: oppF
Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
CAC0176
oppA
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
CAC0177
oppB
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
CAC0178
oppC
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
CAC0179
oppD
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
CAC0180
oppF
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
Position: 43
Score: 4.2
Sequence: TTGTAATCATTTTCAA
Locus tag: CAC1556
Name: yvbX
Funciton: Putative peptidoglycan hydrolase YvbX, not involved in spore germination
CAC1556
yvbX
Putative peptidoglycan hydrolase YvbX, not involved in spore germination
Position: -117
Score: 4.5
Sequence: ATGAAAAAATTATATT
Locus tag: CAC0708
Name: cggR
Funciton: Central glycolytic genes regulator
Locus tag: CAC0709
Name: gapC
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: CAC0710
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
Locus tag: CAC0711
Name: tpi
Funciton: Triosephosphate isomerase (EC 5.3.1.1)
Locus tag: CAC0712
Name: pgm
Funciton: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Locus tag: CAC0713
Name: eno
Funciton: Enolase (EC 4.2.1.11)
CAC0708
cggR
Central glycolytic genes regulator
CAC0709
gapC
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
CAC0710
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
CAC0711
tpi
Triosephosphate isomerase (EC 5.3.1.1)
CAC0712
pgm
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
CAC0713
eno
Enolase (EC 4.2.1.11)
Position: -190
Score: 4.1
Sequence: AAGAAAACGTTGTCTT
Position: -82
Score: 4.6
Sequence: TTGAAAAAAATTTAAT
Locus tag: CAC2534
Name: null
Funciton: Putative metal-dependent phosphohydrolase
CAC2534
Putative metal-dependent phosphohydrolase
Position: -183
Score: 4.1
Sequence: TTGTAAACTCTTTAAT
Locus tag: CAC1816
Name: rny
Funciton: Ribonuclease Y
CAC1816
rny
Ribonuclease Y
Position: 10
Score: 4.5
Sequence: ATGAAAAGGTTTATAT
Locus tag: CAC0086
Name: YkgB
Funciton: Predicted 6-phosphogluconolactonase
CAC0086
YkgB
Predicted 6-phosphogluconolactonase
Position: -332
Score: 4.6
Sequence: TTGAAAACATTATCAT
Locus tag: CAC3682
Name: kdpA/atkA
Funciton: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Locus tag: CAC3681
Name: kdpB
Funciton: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Locus tag: CAC3680
Name: kdpC
Funciton: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Locus tag: CAC3679
Name: kdpX
Funciton: Uncharacterized protein of kdp operon, kdpX
Locus tag: CAC3678
Name: kdpD
Funciton: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
Locus tag: CAC3677
Name: kdpE
Funciton: Transcription regulator of potassium transport, OmpR family
CAC3682
kdpA/atkA
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CAC3681
kdpB
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CAC3680
kdpC
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CAC3679
kdpX
Uncharacterized protein of kdp operon, kdpX
CAC3678
kdpD
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
CAC3677
kdpE
Transcription regulator of potassium transport, OmpR family
Position: -321
Score: 4.6
Sequence: ATGAAAACGTATTAAT
Locus tag: CAP0066
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: CAP0067
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: CAP0068
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
CAP0066
ptnA
PTS system, mannose-specific IIBA component (EC 2.7.1.69)
CAP0067
manY
PTS system, mannose-specific IIC component (EC 2.7.1.69)
CAP0068
ptnD
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -341
Score: 4.4
Sequence: TGGAAAACATTTTCAT
Locus tag: CAC3648
Name: CAC3648
Funciton: Acetyltransferase
CAC3648
CAC3648
Acetyltransferase
Position: -108
Score: 4.7
Sequence: ATGAAAAAAATTAAAT
Locus tag: CAC3647
Name: abrB
Funciton: Transition state regulatory protein AbrB
CAC3647
abrB
Transition state regulatory protein AbrB
Position: -154
Score: 4.6
Sequence: ATGAAAACATTAAAAT
Locus tag: CAC3295
Name: mepA
Funciton: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
CAC3295
mepA
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
Position: -156
Score: 4.4
Sequence: ATAAAAAAATTTTAAA
Locus tag: CAC0535
Name: null
Funciton: Metal-dependent hydrolase of the beta-lactamase superfamily II
CAC0535
Metal-dependent hydrolase of the beta-lactamase superfamily II
Position: -151
Score: 3.9
Sequence: ATGATAACCTTATCAT
Locus tag: CAC0743
Name: bglH
Funciton: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
CAC0743
bglH
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Position: -79
Score: 4
Sequence: TATAAAAATTTATCAT
Position: -61
Score: 4.6
Sequence: ATGAAATCGTTTAAAA
Locus tag: CAC1345
Name: xylT
Funciton: Arabinose-proton symporter
Locus tag: CAC1346
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: CAC1347
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
Locus tag: CAC1348
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
Locus tag: CAC1349
Name: galM
Funciton: L-arabinose-specific 1-epimerase (mutarotase)
CAC1345
xylT
Arabinose-proton symporter
CAC1346
araA
L-arabinose isomerase (EC 5.3.1.4)
CAC1347
tal
Transaldolase (EC 2.2.1.2)
CAC1348
tkt
Transketolase (EC 2.2.1.1)
CAC1349
galM
L-arabinose-specific 1-epimerase (mutarotase)
Position: -104
Score: 4.9
Sequence: ATGAAAAAGTTTACAA
Position: -35
Score: 4.2
Sequence: TTTAAAAAGTTATTTA
Locus tag: CAC2612
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: CAC2611
Name: null
Funciton: Hypothetical protein
Locus tag: CAC2610
Name: null
Funciton: Predicted xylose isomerase
CAC2612
xylB
Xylulose kinase (EC 2.7.1.17)
CAC2611
Hypothetical protein
CAC2610
Predicted xylose isomerase
Position: -157
Score: 3.9
Sequence: TAGAAAAAGAAAACTT
Position: -105
Score: 4
Sequence: TGGTAAACGTTTTACT
Locus tag: CAC1341
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: CAC1342
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
CAC1341
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
CAC1342
araA
L-arabinose isomerase (EC 5.3.1.4)
Position: -122
Score: 4.1
Sequence: AAGAAAAAATATACAT
Locus tag: CAC3673
Name: xylR
Funciton: Transcription repressor of xylose utilization, ROK family
CAC3673
xylR
Transcription repressor of xylose utilization, ROK family
Position: -117
Score: 4.5
Sequence: TTGAAAAAAATTTTAT
Locus tag: CAC2229
Name: nifJ2
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
CAC2229
nifJ2
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -76
Score: 3.9
Sequence: CAGATAACGTTTACAA
Locus tag: CAC0706
Name: eglA
Funciton: Endo-1,4-beta glucanase (EC 3.2.1.4) (fused to two ricin-B-like domains)
CAC0706
eglA
Endo-1,4-beta glucanase (EC 3.2.1.4) (fused to two ricin-B-like domains)
Position: -335
Score: 3.9
Sequence: AAATAAAAATTTATAA
Locus tag: CAC0692
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
CAC0692
uxaC
Uronate isomerase (EC 5.3.1.12)
Position: -114
Score: 4.1
Sequence: ATGTAAATCTTTAAAA
Position: -75
Score: 4.3
Sequence: ATAAAAATATTTTAAA
Locus tag: CAC3272
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Locus tag: CAC3273
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAC3272
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAC3273
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Position: -104
Score: 3.9
Sequence: ATTTAAATTTTAATAT
Locus tag: CAC3274
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAC3274
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Position: -107
Score: 4.1
Sequence: ATTTAAACTATTTTAA
Position: -87
Score: 4
Sequence: ATTAAATCTTTTTCTT
Locus tag: CAC3275
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAC3275
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Position: -167
Score: 4.4
Sequence: ATGAATACGTTTTATT
Locus tag: CAP0002
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAP0002
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Position: -48
Score: 4.6
Sequence: AAGAAAACGATATAAT
Locus tag: CAP0003
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAP0003
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Position: -131
Score: 4
Sequence: AAGTAATCTTTTAAAT
Locus tag: CAC3279
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Locus tag: CAC3280
Name: null
Funciton: Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAC3279
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
CAC3280
Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats
Position: -150
Score: 3.9
Sequence: AATTAAAATTTTATAA
Position: -119
Score: 4.2
Sequence: ATGTAATCGTTATTAT
Locus tag: CAC0612
Name: lrgA
Funciton: Antiholin-like protein LrgA
Locus tag: CAC0611
Name: lrgB
Funciton: LrgA-associated membrane protein LrgB
Locus tag: CAC0610
Name: null
Funciton: Hypothetical protein
CAC0612
lrgA
Antiholin-like protein LrgA
CAC0611
lrgB
LrgA-associated membrane protein LrgB
CAC0610
Hypothetical protein
Position: -61
Score: 4.4
Sequence: ATGAAATCGATTATAA
Locus tag: CAC2851
Name: null
Funciton: Transcriptional regulator, GntR family
CAC2851
Transcriptional regulator, GntR family
Position: -148
Score: 4.4
Sequence: ATGAAAACGTATATAA
Locus tag: CAC2689
Name: CAC2689
Funciton: Hypothetical protein
CAC2689
CAC2689
Hypothetical protein
Position: -249
Score: 4.2
Sequence: AATTAAAAGTTTTATA
Locus tag: CAC0423
Name: null
Funciton: PTS system, sucrose-specific IIBCA component (EC 2.7.1.69)
Locus tag: CAC0424
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
Locus tag: CAC0425
Name: sacA
Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
CAC0423
PTS system, sucrose-specific IIBCA component (EC 2.7.1.69)
CAC0424
scrK
Fructokinase (EC 2.7.1.4)
CAC0425
sacA
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Position: -170
Score: 4.7
Sequence: AAGAAAATGTTTTCAA
Locus tag: CAP0160
Name: CAP0160
Funciton: Predicted cell-surface chitinase
CAP0160
CAP0160
Predicted cell-surface chitinase
Position: -202
Score: 4.4
Sequence: TTGAAAAGGTTTTCTT
Locus tag: CAC0532
Name: null
Funciton: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
Locus tag: CAC0533
Name: glvA
Funciton: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
CAC0532
PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
CAC0533
glvA
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Position: -26
Score: 4.1
Sequence: AGGATAATGTTTACTT
Locus tag: CAC1320
Name: glpP
Funciton: Glycerol uptake operon antiterminator regulatory protein
Locus tag: CAC1321
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
CAC1320
glpP
Glycerol uptake operon antiterminator regulatory protein
CAC1321
glpK
Glycerol kinase (EC 2.7.1.30)
Position: -91
Score: 4.7
Sequence: ATGAAAACGTTATATA
Locus tag: CAC1339
Name: araE
Funciton: Arabinose-proton symporter
CAC1339
araE
Arabinose-proton symporter
Position: -189
Score: 4.4
Sequence: ATTAAAAAAATTTAAA
Locus tag: CAP0097
Name: lipG
Funciton: Putative hydrolase
Locus tag: CAP0096
Name: ipyR
Funciton: Inorganic pyrophosphatase
CAP0097
lipG
Putative hydrolase
CAP0096
ipyR
Inorganic pyrophosphatase
Position: -170
Score: 4.6
Sequence: TTGAAAACATTTTCTT
Locus tag: CAP0161
Name: solR
Funciton: Transcription regulator of butanol and acetone formation
CAP0161
solR
Transcription regulator of butanol and acetone formation
Position: -63
Score: 4.3
Sequence: TATAAAAAGTTTTATA
Locus tag: CAC2514
Name: lacB
Funciton: Probable beta-galactosidase B (EC 3.2.1.23)
CAC2514
lacB
Probable beta-galactosidase B (EC 3.2.1.23)
Position: -137
Score: 4.5
Sequence: ATGATAACATTTTCAT
Locus tag: CAC0421
Name: null
Funciton: Predicted membrane protein
CAC0421
Predicted membrane protein
Position: -124
Score: 4.6
Sequence: ATGTAAACGTTAATAT
Locus tag: CAC2981
Name: mpg
Funciton: Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)
CAC2981
mpg
Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13 ) / Phosphomannomutase (EC 5.4.2.8)
Position: -47
Score: 4.3
Sequence: TAGTAAAAGATTTTTT
Locus tag: CAC1968
Name: pelL2
Funciton: Pectate lyase, secreted, polysaccharide lyase family
CAC1968
pelL2
Pectate lyase, secreted, polysaccharide lyase family
Position: -129
Score: 4
Sequence: AATAAAAAGTTTTACA
Position: -44
Score: 4.4
Sequence: ATGTTAACGTTAACAT
Locus tag: CAP0056
Name: pelL2
Funciton: Pectate lyase, secreted, polysaccharide lyase family
CAP0056
pelL2
Pectate lyase, secreted, polysaccharide lyase family
Position: -94
Score: 3.9
Sequence: ATATTAAAATTTTCAA
Position: -70
Score: 4.6
Sequence: AAGAAAACGATTATAT
Locus tag: CAC2828
Name: mutT1
Funciton: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
Locus tag: CAC2827
Name: null
Funciton: Predicted S-adenosylmethionine-dependent methyltransferase
CAC2828
mutT1
Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
CAC2827
Predicted S-adenosylmethionine-dependent methyltransferase
Position: -50
Score: 4.7
Sequence: TTGTAAATGTTTTCAT
Locus tag: CAC1075
Name: gluA
Funciton: Periplasmic beta-glucosidase family protein
CAC1075
gluA
Periplasmic beta-glucosidase family protein
Position: -153
Score: 4
Sequence: ACTAAAATGTTTACAT
Locus tag: CAC0383
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: CAC0384
Name: licB
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: CAC0385
Name: bglC
Funciton: Beta-glucosidase (EC 3.2.1.21)
Locus tag: CAC0386
Name: licC
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
CAC0383
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
CAC0384
licB
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
CAC0385
bglC
Beta-glucosidase (EC 3.2.1.21)
CAC0386
licC
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Position: -51
Score: 4.9
Sequence: TTGAAAACGTTTTTAT
Locus tag: CAC1462
Name: fruA
Funciton: Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65)
CAC1462
fruA
Fructanase (EC 3.2.1.80) / Levanase (EC 3.2.1.65)
Position: -158
Score: 4.8
Sequence: TTGTAAACGTTTTTAT
Locus tag: CAC0332
Name: manB
Funciton: Beta-mannanase (EC 3.2.1.78)
CAC0332
manB
Beta-mannanase (EC 3.2.1.78)
Position: -38
Score: 4.4
Sequence: TTGAAAACGCTATCAT
Locus tag: CAC0164
Name: null
Funciton: ABC transporter, ATP binding-protein
Locus tag: CAC0165
Name: null
Funciton: ABC transporter permease protein
CAC0164
ABC transporter, ATP binding-protein
CAC0165
ABC transporter permease protein
Position: -202
Score: 4.6
Sequence: ATGAAAAAATTTACAA
Position: -157
Score: 4.5
Sequence: TAGTAAACGTTTTCTT
Locus tag: CAC2658
Name: glnN
Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
CAC2658
glnN
Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Position: -56
Score: 4.6
Sequence: TAGAAAACGATTTCTT
Locus tag: CAC2570
Name: ganA
Funciton: Arabinogalactan endo-1,4-beta-galactosidase
CAC2570
ganA
Arabinogalactan endo-1,4-beta-galactosidase
Position: 3
Score: 4.2
Sequence: AATAAAATTTTTAAAT
Locus tag: CAC0358
Name: null
Funciton: Predicted polysaccharide deacetylase
Locus tag: CAC0357
Name: null
Funciton: Permease of the Na:galactoside symporter family
Locus tag: CAC0356
Name: null
Funciton: Conserved hypothetical protein
Locus tag: CAC0355
Name: pgl
Funciton: Polygalacturonase (EC 3.2.1.15)
CAC0358
Predicted polysaccharide deacetylase
CAC0357
Permease of the Na:galactoside symporter family
CAC0356
Conserved hypothetical protein
CAC0355
pgl
Polygalacturonase (EC 3.2.1.15)
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