Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Clostridium beijerincki NCIMB 8052

Properties
Regulator type: Transcription factor
TF locus tag: Cbei_0047
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Clostridia-1
Statistics of regulated genes:
- Genes 135
- Operons 74
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 436 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -83
Score: 4.1
Sequence: ATATAAAAGATAATAA
Locus tag: Cbei_4683
Name: null
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Cbei_4683
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Position: -223
Score: 4.1
Sequence: ATGCAAAAATTTTATA
Locus tag: Cbei_4577
Name: aroF
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Locus tag: Cbei_4576
Name: aroB
Funciton: 3-dehydroquinate synthase (EC 4.2.3.4)
Locus tag: Cbei_4575
Name: aroA
Funciton: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: Cbei_4574
Name: aroC
Funciton: Chorismate synthase (EC 4.2.3.5)
Locus tag: Cbei_4573
Name: pheA
Funciton: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
Locus tag: Cbei_4572
Name: aroE
Funciton: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Locus tag: Cbei_4571
Name: aroK
Funciton: Shikimate kinase I (EC 2.7.1.71)
Cbei_4577
aroF
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Cbei_4576
aroB
3-dehydroquinate synthase (EC 4.2.3.4)
Cbei_4575
aroA
5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Cbei_4574
aroC
Chorismate synthase (EC 4.2.3.5)
Cbei_4573
pheA
Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
Cbei_4572
aroE
Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Cbei_4571
aroK
Shikimate kinase I (EC 2.7.1.71)
Position: -131
Score: 4.7
Sequence: ATGAAAATATTTTCAT
Locus tag: Cbei_4985
Name: Cbei_4985
Funciton: Predicted transcriptional regulator of glucosides utilization, RpiR family
Cbei_4985
Cbei_4985
Predicted transcriptional regulator of glucosides utilization, RpiR family
Position: -214
Score: 4.3
Sequence: TAGAAAAAAATTAAAA
Locus tag: Cbei_4640
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: Cbei_4639
Name: null
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Cbei_4640
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Cbei_4639
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Position: -112
Score: 4
Sequence: AAATAAATATTTACAT
Position: -43
Score: 4
Sequence: TATTAAATGATTTTTA
Locus tag: Cbei_2386
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
Cbei_2386
tal
Transaldolase (EC 2.2.1.2)
Position: -253
Score: 4.4
Sequence: TTAAAAAAGTTTAATA
Position: -151
Score: 4.3
Sequence: ATAAAAAAATTTAAAA
Locus tag: Cbei_0645
Name: clpB
Funciton: ATP-dependent chaperone ClpB
Cbei_0645
clpB
ATP-dependent chaperone ClpB
Position: -35
Score: 4.1
Sequence: AAGAAAATTATAAAAT
Locus tag: Cbei_4806
Name: null
Funciton: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
Locus tag: Cbei_4805
Name: glvA2
Funciton: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Locus tag: Cbei_4804
Name: null
Funciton: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
Cbei_4806
PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
Cbei_4805
glvA2
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Cbei_4804
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
Position: -178
Score: 4.2
Sequence: ATATAAAATTTTTAAA
Locus tag: Cbei_1404
Name: niaX
Funciton: Substrate-specific component NiaX of predicted niacin ECF transporter
Cbei_1404
niaX
Substrate-specific component NiaX of predicted niacin ECF transporter
Position: -119
Score: 4.7
Sequence: TTGAAAACGATTTATA
Locus tag: Cbei_0455
Name: fucO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
Cbei_0455
fucO
Lactaldehyde reductase (EC 1.1.1.77)
Position: -58
Score: 4.1
Sequence: TTGAAAATACTTACAA
Locus tag: Cbei_3349
Name: htd2
Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Cbei_3349
htd2
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Position: -26
Score: 4.5
Sequence: AAGAAAACAATTACAT
Locus tag: Cbei_4510
Name: glpP
Funciton: Glycerol uptake operon antiterminator regulatory protein
Cbei_4510
glpP
Glycerol uptake operon antiterminator regulatory protein
Position: -143
Score: 3.9
Sequence: AAGTATACATTTACAT
Locus tag: Cbei_4508
Name: glpA
Funciton: Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
Locus tag: Cbei_4507
Name: null
Funciton: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
Locus tag: Cbei_4506
Name: null
Funciton: Uncharacterized predected metal-binding protein
Cbei_4508
glpA
Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
Cbei_4507
Sarcosine oxidase alpha subunit (EC 1.5.3.1)
Cbei_4506
Uncharacterized predected metal-binding protein
Position: -73
Score: 3.9
Sequence: ATATAAATAATAAATT
Locus tag: Cbei_4509
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
Cbei_4509
glpK
Glycerol kinase (EC 2.7.1.30)
Position: -132
Score: 4.4
Sequence: TTTAAAACTTTTAAAT
Locus tag: Cbei_4511
Name: glpF
Funciton: Glycerol uptake facilitator protein
Cbei_4511
glpF
Glycerol uptake facilitator protein
Position: -52
Score: 4
Sequence: ATATAAATAATTTTAA
Locus tag: Cbei_2148
Name: dhaK
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: Cbei_2149
Name: dhaM
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: Cbei_2150
Name: dhaL
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Cbei_2148
dhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Cbei_2149
dhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Cbei_2150
dhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Position: -141
Score: 4.1
Sequence: TTTAAAAAGAATAAAA
Position: 49
Score: 4
Sequence: AAGAAAACGTTAATAG
Locus tag: Cbei_3273
Name: bglP
Funciton: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
Cbei_3273
bglP
PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
Position: 0
Score: 4.2
Sequence: ATGAAAAAAATAATTA
Locus tag: Cbei_3272
Name: Cbei_3272
Funciton: Putative secreted hydrolase
Locus tag: Cbei_3271
Name: bglH2
Funciton: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Cbei_3272
Cbei_3272
Putative secreted hydrolase
Cbei_3271
bglH2
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Position: -86
Score: 4
Sequence: TTGAAAAGGTATTCTT
Locus tag: Cbei_0242
Name: mtlA
Funciton: PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
Cbei_0242
mtlA
PTS system, mannitol-specific IIBC component (EC 2.7.1.69)
Position: 85
Score: 4.2
Sequence: ATGAAAAAGGTTATTA
Locus tag: Cbei_3335
Name: null
Funciton: Transcriptional regulator, TetR family
Cbei_3335
Transcriptional regulator, TetR family
Position: -142
Score: 4
Sequence: TTGTAAACGATTATTG
Position: -35
Score: 3.9
Sequence: TAATAAATATTTTATT
Locus tag: Cbei_4126
Name: xynD
Funciton: Beta-xylosidase (EC 3.2.1.37)
Cbei_4126
xynD
Beta-xylosidase (EC 3.2.1.37)
Position: -41
Score: 4.2
Sequence: AAGAAAAATATTATAA
Locus tag: Cbei_4125
Name: xynT
Funciton: Xyloside transporter XynT
Cbei_4125
xynT
Xyloside transporter XynT
Position: -162
Score: 4.7
Sequence: TTGTAAACGTTTTATA
Locus tag: Cbei_4636
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: Cbei_4635
Name: null
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: Cbei_4634
Name: null
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Cbei_4636
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Cbei_4635
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Cbei_4634
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Position: -176
Score: 4.1
Sequence: CTGAAAATATTTTTAA
Position: -46
Score: 4.8
Sequence: TTGAAAAAGTTTTTAT
Locus tag: Cbei_1475
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: Cbei_1476
Name: null
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: Cbei_1477
Name: bglC
Funciton: Beta-glucosidase (EC 3.2.1.21)
Locus tag: Cbei_1478
Name: null
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Cbei_1475
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Cbei_1476
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Cbei_1477
bglC
Beta-glucosidase (EC 3.2.1.21)
Cbei_1478
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Position: -215
Score: 4.1
Sequence: TATTAAACATTTTCAA
Position: -134
Score: 4.6
Sequence: TTGTAAACATTTAAAT
Locus tag: Cbei_2320
Name: treB
Funciton: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
Locus tag: Cbei_2321
Name: treA
Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Cbei_2320
treB
PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
Cbei_2321
treA
Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
Position: -203
Score: 4.6
Sequence: TTGAAAAAATTTTTAT
Locus tag: Cbei_4325
Name: null
Funciton: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
Cbei_4325
Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
Position: -27
Score: 4.5
Sequence: ATGAAAATATTATAAT
Locus tag: Cbei_2423
Name: Cbei_2423
Funciton: Predicted ABC transporter, periplasmic protein
Cbei_2423
Cbei_2423
Predicted ABC transporter, periplasmic protein
Position: -55
Score: 4.2
Sequence: ATGTAAATGTATACTA
Locus tag: Cbei_4465
Name: galM
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
Cbei_4465
galM
Aldose 1-epimerase (EC 5.1.3.3)
Position: -245
Score: 4.5
Sequence: TTGAAAATATTTACAA
Position: -184
Score: 4.2
Sequence: ATAAAAAATTTTTTTT
Locus tag: Cbei_1967
Name: ygeY
Funciton: Putative deacetylase
Locus tag: Cbei_1968
Name: ygeW
Funciton: Putative ornithine carbamoyltransferase (EC 2.1.3.3)
Locus tag: Cbei_1969
Name: yqeA
Funciton: Carbamate kinase (EC 2.7.2.2)
Cbei_1967
ygeY
Putative deacetylase
Cbei_1968
ygeW
Putative ornithine carbamoyltransferase (EC 2.1.3.3)
Cbei_1969
yqeA
Carbamate kinase (EC 2.7.2.2)
Position: -192
Score: 4.5
Sequence: ATAAAAATGATTAAAT
Locus tag: Cbei_2175
Name: leuA1
Funciton: 2-isopropylmalate synthase (EC 2.3.3.13)
Cbei_2175
leuA1
2-isopropylmalate synthase (EC 2.3.3.13)
Position: -41
Score: 4.6
Sequence: AAGTAAACGATTTAAA
Locus tag: Cbei_4452
Name: xylB
Funciton: Ribulokinase (EC 2.7.1.16)
Cbei_4452
xylB
Ribulokinase (EC 2.7.1.16)
Position: -234
Score: 4.2
Sequence: ATTAAATTGTTTTATA
Position: -190
Score: 4.2
Sequence: ATGAAAATGAATTTTT
Position: -100
Score: 4.1
Sequence: TAGAAAATTATATAAT
Locus tag: Cbei_0663
Name: null
Funciton: Hypothetical membrane protein
Cbei_0663
Hypothetical membrane protein
Position: -59
Score: 4.6
Sequence: AAGAAAATGTTTACTT
Locus tag: Cbei_3986
Name: null
Funciton: Putative S-layer protein (peptidoglycan anchored)
Cbei_3986
Putative S-layer protein (peptidoglycan anchored)
Position: -33
Score: 4.6
Sequence: TTGAAAACGTTATATA
Locus tag: Cbei_3501
Name: Cbei_3501
Funciton: Predicted carbohydrate ABC transporter, periplasmic substrate-binding protein
Locus tag: Cbei_3500
Name: Cbei_3500
Funciton: Predicted carbohydrate , permease protein
Locus tag: Cbei_3499
Name: Cbei_3499
Funciton: Predicted carbohydrate ABC transporter, permease protein
Locus tag: Cbei_3498
Name: null
Funciton: Hypothetical protein
Cbei_3501
Cbei_3501
Predicted carbohydrate ABC transporter, periplasmic substrate-binding protein
Cbei_3500
Cbei_3500
Predicted carbohydrate , permease protein
Cbei_3499
Cbei_3499
Predicted carbohydrate ABC transporter, permease protein
Cbei_3498
Hypothetical protein
Position: -156
Score: 4.1
Sequence: ATAATAACATTTTAAA
Locus tag: Cbei_4156
Name: null
Funciton: Zinc protease (EC 3.4.-.-)
Locus tag: Cbei_4155
Name: ltaE
Funciton: Low-specificity L-threonine aldolase (EC 4.1.2.5)
Cbei_4156
Zinc protease (EC 3.4.-.-)
Cbei_4155
ltaE
Low-specificity L-threonine aldolase (EC 4.1.2.5)
Position: -48
Score: 4.3
Sequence: ATAAAAACTTTTTTAT
Locus tag: Cbei_3872
Name: null
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Locus tag: Cbei_3871
Name: null
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Cbei_3872
PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Cbei_3871
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -48
Score: 4.5
Sequence: TTAAAAAAGTTTTTAT
Locus tag: Cbei_4912
Name: null
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Locus tag: Cbei_4911
Name: null
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Cbei_4912
PTS system, mannose-specific IIC component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69)
Cbei_4911
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -74
Score: 4.6
Sequence: TTTAAAACGTTTAATT
Locus tag: Cbei_4661
Name: null
Funciton: Transcriptional regulator, AraC family
Cbei_4661
Transcriptional regulator, AraC family
Position: -132
Score: 4.1
Sequence: ATGATAAATTTATTAT
Locus tag: Cbei_4959
Name: cheY
Funciton: Chemotaxis protein cheY
Locus tag: Cbei_4958
Name: cheX
Funciton: Chemotaxis protein CheX
Cbei_4959
cheY
Chemotaxis protein cheY
Cbei_4958
cheX
Chemotaxis protein CheX
Position: -186
Score: 4.6
Sequence: ATGAAAACGTATTAAT
Locus tag: Cbei_4450
Name: araF
Funciton: L-arabinose ABC transporter, substrate-binding periplasmic protein (TC 3.A.1.2.2)
Locus tag: Cbei_4449
Name: araG
Funciton: L-arabinose ABC transporter, ATP-binding protein
Locus tag: Cbei_4448
Name: araH
Funciton: L-arabinose ABC transporter, permease protein (TC 3.A.1.2.2)
Cbei_4450
araF
L-arabinose ABC transporter, substrate-binding periplasmic protein (TC 3.A.1.2.2)
Cbei_4449
araG
L-arabinose ABC transporter, ATP-binding protein
Cbei_4448
araH
L-arabinose ABC transporter, permease protein (TC 3.A.1.2.2)
Position: -188
Score: 4.7
Sequence: ATGATAACGTTTTTAT
Position: -153
Score: 4.1
Sequence: ATATAAAATATTAAAT
Locus tag: Cbei_5042
Name: livK
Funciton: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
Locus tag: Cbei_5043
Name: livH
Funciton: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Locus tag: Cbei_5044
Name: livM
Funciton: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Locus tag: Cbei_5045
Name: livG
Funciton: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Locus tag: Cbei_5046
Name: livF
Funciton: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Cbei_5042
livK
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
Cbei_5043
livH
High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Cbei_5044
livM
Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Cbei_5045
livG
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Cbei_5046
livF
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Position: -225
Score: 4.1
Sequence: ATTTTAACGTTAAAAA
Position: -168
Score: 4.1
Sequence: AAGTAAATATTATTAT
Locus tag: Cbei_2769
Name: livK
Funciton: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
Locus tag: Cbei_2768
Name: livH
Funciton: High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Locus tag: Cbei_2767
Name: livM
Funciton: Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Locus tag: Cbei_2766
Name: livF
Funciton: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Locus tag: Cbei_2765
Name: livF
Funciton: Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Cbei_2769
livK
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
Cbei_2768
livH
High-affinity branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Cbei_2767
livM
Branched-chain amino acid transport system permease protein (TC 3.A.1.4.1)
Cbei_2766
livF
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Cbei_2765
livF
Branched-chain amino acid transport ATP-binding protein (TC 3.A.1.4.1)
Position: -205
Score: 4.1
Sequence: AAGAAAAGGTTAACAA
Locus tag: Cbei_0230
Name: malH
Funciton: Maltose/maltodextrin ABC transporter, periplasmic component
Locus tag: Cbei_0231
Name: malF
Funciton: Maltose/maltodextrin ABC transporter, permease protein MalF
Locus tag: Cbei_0232
Name: malG
Funciton: Maltose/maltodextrin ABC transporter, permease protein MalG
Locus tag: Cbei_0233
Name: malQ
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Cbei_0230
malH
Maltose/maltodextrin ABC transporter, periplasmic component
Cbei_0231
malF
Maltose/maltodextrin ABC transporter, permease protein MalF
Cbei_0232
malG
Maltose/maltodextrin ABC transporter, permease protein MalG
Cbei_0233
malQ
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Position: -227
Score: 4.6
Sequence: ATGAAAATTATTTAAT
Locus tag: Cbei_2026
Name: kdpX
Funciton: Uncharacterized protein of kdp operon, kdpX
Cbei_2026
kdpX
Uncharacterized protein of kdp operon, kdpX
Position: -103
Score: 4.2
Sequence: AATTAAATGATTAAAA
Locus tag: Cbei_1278
Name: YkgB
Funciton: Predicted 6-phosphogluconolactonase
Cbei_1278
YkgB
Predicted 6-phosphogluconolactonase
Position: -374
Score: 4.1
Sequence: ATAAAAATTATTTTAT
Locus tag: Cbei_0711
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: Cbei_0712
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: Cbei_0713
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Cbei_0711
ptnA
PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Cbei_0712
manY
PTS system, mannose-specific IIC component (EC 2.7.1.69)
Cbei_0713
ptnD
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -112
Score: 4.1
Sequence: TTTAAAAAAATAATAT
Locus tag: Cbei_2040
Name: ydiF
Funciton: Coenzyme A transferase
Locus tag: Cbei_2041
Name: yxjC
Funciton: Predicted D-beta-hydroxybutyrate permease
Cbei_2040
ydiF
Coenzyme A transferase
Cbei_2041
yxjC
Predicted D-beta-hydroxybutyrate permease
Position: -194
Score: 4.6
Sequence: TTGAAAAAATTTTCTT
Locus tag: Cbei_3821
Name: atoE
Funciton: Short chain fatty acids transporter
Locus tag: Cbei_3820
Name: hbd2
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: Cbei_3819
Name: ydiF
Funciton: Coenzyme A transferase
Cbei_3821
atoE
Short chain fatty acids transporter
Cbei_3820
hbd2
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Cbei_3819
ydiF
Coenzyme A transferase
Position: -226
Score: 4.7
Sequence: ATGTAAATGTTTACTT
Locus tag: Cbei_3351
Name: ydiF
Funciton: Coenzyme A transferase
Locus tag: Cbei_3350
Name: yxjC
Funciton: Predicted D-beta-hydroxybutyrate permease
Cbei_3351
ydiF
Coenzyme A transferase
Cbei_3350
yxjC
Predicted D-beta-hydroxybutyrate permease
Position: -60
Score: 4.7
Sequence: ATTAAAATGATTTAAT
Locus tag: Cbei_2038
Name: Cbei_2038
Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Cbei_2038
Cbei_2038
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Position: -95
Score: 4.1
Sequence: TTATAAATATTTAAAA
Locus tag: Cbei_4885
Name: abrB
Funciton: Transition state regulatory protein AbrB
Cbei_4885
abrB
Transition state regulatory protein AbrB
Position: -60
Score: 4.5
Sequence: ATGAAAACGTATATAT
Locus tag: Cbei_5019
Name: null
Funciton: PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
Locus tag: Cbei_5018
Name: glvA2
Funciton: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Locus tag: Cbei_5017
Name: null
Funciton: PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
Cbei_5019
PTS system, predicted maltose a-specific IICB component (EC 2.7.1.69)
Cbei_5018
glvA2
Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Cbei_5017
PTS system, predicted maltose-specific IIA component (EC 2.7.1.69)
Position: -195
Score: 4.7
Sequence: ATGAAAATATTTTCAT
Locus tag: Cbei_4984
Name: pagL
Funciton: Phospho-alpha-glucosidase (EC 3.2.1.122)
Locus tag: Cbei_4983
Name: glcB
Funciton: PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69)
Locus tag: Cbei_4982
Name: ypqE
Funciton: PTS system, glucose-specific IIA component (EC 2.7.1.69)
Cbei_4984
pagL
Phospho-alpha-glucosidase (EC 3.2.1.122)
Cbei_4983
glcB
PTS system, maltose and glucose-specific IICBA component (EC 2.7.1.69)
Cbei_4982
ypqE
PTS system, glucose-specific IIA component (EC 2.7.1.69)
Position: -74
Score: 4.7
Sequence: ATTAAAACGTTTAAAA
Locus tag: Cbei_4847
Name: licH
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: Cbei_4846
Name: bglP
Funciton: Beta-glucoside-specific phosphotransferase enzyme IIBCA component (EC 2.7.1.69)
Locus tag: Cbei_4845
Name: null
Funciton: Predicted racemase
Cbei_4847
licH
6-phospho-beta-glucosidase (EC 3.2.1.86)
Cbei_4846
bglP
Beta-glucoside-specific phosphotransferase enzyme IIBCA component (EC 2.7.1.69)
Cbei_4845
Predicted racemase
Position: -134
Score: 4.4
Sequence: ATGAAAATATTATATT
Locus tag: Cbei_4918
Name: null
Funciton: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
Cbei_4918
Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
Position: -156
Score: 4.1
Sequence: TGGTAAAAGTTAATAT
Position: -139
Score: 3.9
Sequence: ATTAAAATTATAATAA
Position: -41
Score: 4
Sequence: TTATAAATATTTAATA
Locus tag: Cbei_2912
Name: null
Funciton: Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
Cbei_2912
Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain
Position: -126
Score: 4
Sequence: AAAAAAATATTTATAA
Position: -92
Score: 4.8
Sequence: ATGAAAACATTTAAAT
Locus tag: Cbei_2495
Name: null
Funciton: Predicted uronate isomerase
Cbei_2495
Predicted uronate isomerase
Position: -117
Score: 4
Sequence: AAGAAAATGTCTAAAT
Locus tag: Cbei_4454
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
Cbei_4454
tal
Transaldolase (EC 2.2.1.2)
Position: -192
Score: 3.9
Sequence: ATGAAAAGGTATACTA
Locus tag: Cbei_4457
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Cbei_4457
araA
L-arabinose isomerase (EC 5.3.1.4)
Position: -61
Score: 4.2
Sequence: ATATAAACATTTTATA
Locus tag: Cbei_2832
Name: bglH
Funciton: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Cbei_2832
bglH
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Position: -254
Score: 4.6
Sequence: AAGAAAAAGTTTATAT
Position: -99
Score: 4.1
Sequence: ATAATAAAGTTATCAA
Locus tag: Cbei_1832
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: Cbei_1833
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Cbei_1832
uxaC
Uronate isomerase (EC 5.3.1.12)
Cbei_1833
uxaB
Altronate oxidoreductase (EC 1.1.1.58)
Position: -29
Score: 4.3
Sequence: ATGATAACAATTTTAA
Locus tag: Cbei_1222
Name: CAC2689
Funciton: Hypothetical protein
Cbei_1222
CAC2689
Hypothetical protein
Position: -223
Score: 4.4
Sequence: TTTTAAAAGTTATAAT
Locus tag: Cbei_1853
Name: nifJ2
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Cbei_1853
nifJ2
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -261
Score: 4.1
Sequence: ATATAAAATTTTAATT
Position: -157
Score: 3.9
Sequence: AAATAAACTTTTACTT
Position: -86
Score: 4
Sequence: ATTAAAATGATAGCAT
Locus tag: Cbei_1838
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Locus tag: Cbei_1839
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
Cbei_1838
uxaB
Altronate oxidoreductase (EC 1.1.1.58)
Cbei_1839
uxaA
Altronate hydrolase (EC 4.2.1.7)
Position: -129
Score: 4
Sequence: AAGAAAACGTTATAGT
Locus tag: Cbei_4657
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: Cbei_4656
Name: uxuT
Funciton: Predicted oligogalacturonide transporter
Cbei_4657
uxaC
Uronate isomerase (EC 5.3.1.12)
Cbei_4656
uxuT
Predicted oligogalacturonide transporter
Position: -37
Score: 4
Sequence: ATATAAAATATTTATT
Locus tag: Cbei_4082
Name: uxaC
Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: Cbei_4081
Name: uxuT
Funciton: Predicted oligogalacturonide transporter
Cbei_4082
uxaC
Uronate isomerase (EC 5.3.1.12)
Cbei_4081
uxuT
Predicted oligogalacturonide transporter
Position: -244
Score: 4.3
Sequence: TTTAAAAAGTTATTTT
Position: -42
Score: 4.3
Sequence: ATTATAAAGATTTAAA
Locus tag: Cbei_4681
Name: null
Funciton: Predicted xylose isomerase
Cbei_4681
Predicted xylose isomerase
Position: -171
Score: 3.9
Sequence: TTGATAATAATAAATT
Position: -126
Score: 4.2
Sequence: ATAAAAATTATTAAAT
Locus tag: Cbei_2389
Name: null
Funciton: Predicted xylose isomerase
Cbei_2389
Predicted xylose isomerase
Position: -37
Score: 4
Sequence: ATAATAATATTTATAT
Locus tag: Cbei_5011
Name: scrR
Funciton: Sucrose operon repressor ScrR, LacI family
Locus tag: Cbei_5010
Name: scrB
Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Locus tag: Cbei_5009
Name: scrK
Funciton: Fructokinase (EC 2.7.1.4)
Cbei_5011
scrR
Sucrose operon repressor ScrR, LacI family
Cbei_5010
scrB
Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Cbei_5009
scrK
Fructokinase (EC 2.7.1.4)
Position: -51
Score: 4.4
Sequence: ATGATAATGTTAACAT
Locus tag: Cbei_4705
Name: null
Funciton: PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
Cbei_4705
PTS system, maltose and glucose-specific IICB component (EC 2.7.1.69)
Position: -145
Score: 4.3
Sequence: TTATAAAAGTTAAAAT
Locus tag: Cbei_2388
Name: null
Funciton: Hypothetical protein
Cbei_2388
Hypothetical protein
Position: -152
Score: 4.4
Sequence: ATGAAAATGTATTCAA
Position: -83
Score: 4.2
Sequence: TTTAAAAAGTTATTTA
Locus tag: Cbei_2384
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: Cbei_2385
Name: xylR
Funciton: Transcription repressor of xylose utilization, ROK family
Cbei_2384
xylB
Xylulose kinase (EC 2.7.1.17)
Cbei_2385
xylR
Transcription repressor of xylose utilization, ROK family
Position: -132
Score: 4.3
Sequence: TTTAAAAATATTTAAT
Locus tag: Cbei_2775
Name: mutT1
Funciton: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
Cbei_2775
mutT1
Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-)
Position: -70
Score: 4
Sequence: TTATTAATGTTTTTAA
Locus tag: Cbei_0444
Name: glnN
Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Cbei_0444
glnN
Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Position: -172
Score: 4.1
Sequence: TAGATAATGTTTTTTA
Locus tag: Cbei_3239
Name: null
Funciton: Conserved hypothetical protein
Cbei_3239
Conserved hypothetical protein
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