Regulon of CcpA in Clostridium tetani E88
| Regulator type: | Transcription factor |
| TF locus tag: | CTC00263 |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbohydrate metabolism |
| Effector: | HPr, phosphocarrier protein |
| Regulog: | CcpA - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 35 |
| - Operons | 20 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - CcpA
- By taxonomy - Clostridia-1
- By TF family - LacI
- By effector - HPr, phosphocarrier protein
- By pathway - Carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -51
Score: 4.2 Sequence: AAGAAAAATATATAAT
Locus tag: CTC02292
Name: null Funciton: Methyltransferase (EC 2.1.1.-)
Locus tag: CTC02291
Name: hslO Funciton: Chaperonin |
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Methyltransferase (EC 2.1.1.-)
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hslO
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Chaperonin
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Position: -167
Score: 4.2 Sequence: ATAAAAACAATATAAA
Position: -148
Score: 4.2 Sequence: AATAAAACGATAAAAA
Locus tag: CTC00566
Name: glsA Funciton: Glutaminase (EC 3.5.1.2) |
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glsA
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Glutaminase (EC 3.5.1.2)
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Position: -163
Score: 4.1 Sequence: TTGAAATAGATATTAA
Locus tag: CTC01186
Name: yxkH Funciton: Possible polysaccharide deacetylase |
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yxkH
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Possible polysaccharide deacetylase
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Position: -78
Score: 4.7 Sequence: ATGAAAACATTTTATA
Locus tag: CTC01570
Name: spoIVB Funciton: Stage IV sporulation protein B |
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spoIVB
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Stage IV sporulation protein B
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Position: -24
Score: 4.7 Sequence: AAGAAAACGTTTTCTT
Locus tag: CTC00886
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3) |
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hom
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Homoserine dehydrogenase (EC 1.1.1.3)
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Position: -286
Score: 4.3 Sequence: TAGAAAAAAATTAAAA
Locus tag: CTC00230
Name: glcK Funciton: Glucokinase (EC 2.7.1.2) |
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glcK
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Glucokinase (EC 2.7.1.2)
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Position: -32
Score: 3.8 Sequence: AATTAAATATTTATTA
Locus tag: CTC01996
Name: glpF Funciton: Glycerol uptake facilitator protein |
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glpF
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Glycerol uptake facilitator protein
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Position: -169
Score: 4.3 Sequence: ATTAAAAATATTTCAA
Locus tag: CTC01762
Name: dhaK Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: CTC01761
Name: dhaM Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: CTC01760
Name: dhaL Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Locus tag: CTC01759
Name: glpP Funciton: Glycerol uptake operon antiterminator regulatory protein
Locus tag: CTC01758
Name: glpK Funciton: Glycerol kinase (EC 2.7.1.30) |
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dhaK
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Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
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dhaM
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Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
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dhaL
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Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
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glpP
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Glycerol uptake operon antiterminator regulatory protein
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glpK
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Glycerol kinase (EC 2.7.1.30)
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Position: -143
Score: 4.2 Sequence: TTGAAATCATTATAAT
Locus tag: CTC02462
Name: glpK Funciton: Glycerol kinase (EC 2.7.1.30) |
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glpK
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Glycerol kinase (EC 2.7.1.30)
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Position: -29
Score: 4.1 Sequence: TTTAAAAAAATAATAT
Position: 0
Score: 4.1 Sequence: ATGAAAAAGCTATTTA
Locus tag: CTC00278
Name: gamP Funciton: PTS system, predicted glucoseamine-specific IICBA component |
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gamP
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PTS system, predicted glucoseamine-specific IICBA component
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Position: -39
Score: 4.5 Sequence: ATGAAAAAATTAAAAT
Locus tag: CTC01488
Name: ifcA Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
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ifcA
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Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
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Position: -55
Score: 4.5 Sequence: ATTAAAATGATATAAT
Locus tag: CTC00969
Name: serB Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
Locus tag: CTC00970
Name: null Funciton: Hypothetical protein
Locus tag: CTC00971
Name: lldR Funciton: Transcription regulator of lactate utilization, GntR family
Locus tag: CTC00972
Name: glcA Funciton: L-lactate permease |
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serB
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Phosphoserine phosphatase (EC 3.1.3.3)
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Hypothetical protein
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lldR
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Transcription regulator of lactate utilization, GntR family
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glcA
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L-lactate permease
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Position: 42
Score: 4.8 Sequence: ATGAAAAAGATTATAT
Locus tag: CTC00860
Name: mglB Funciton: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Locus tag: CTC00861
Name: mglA Funciton: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Locus tag: CTC00862
Name: mglC Funciton: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
Locus tag: CTC00863
Name: galR Funciton: Transcription regulator of galactose utilization, LacI family
Locus tag: CTC00864
Name: galT Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Locus tag: CTC00865
Name: null Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: CTC00866
Name: galE Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2) |
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mglB
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Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
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mglA
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Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
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mglC
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Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
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galR
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Transcription regulator of galactose utilization, LacI family
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galT
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Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
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Galactokinase (EC 2.7.1.6)
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galE
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UDP-glucose 4-epimerase (EC 5.1.3.2)
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Position: -122
Score: 4.1 Sequence: TTATAAATAATTTAAA
Locus tag: CTC00263
Name: ccpA Funciton: Catabolite control protein A, LacI family |
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ccpA
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Catabolite control protein A, LacI family
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Position: -113
Score: 4.6 Sequence: TTGAAAAATTTTTAAT
Locus tag: CTC00312
Name: thlA Funciton: Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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thlA
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Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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Position: -40
Score: 4.1 Sequence: TTAAAAAGGATTAAAT
Locus tag: CTC00936
Name: pflD Funciton: pyruvate formate-lyase
Locus tag: CTC00937
Name: pflC Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
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pflD
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pyruvate formate-lyase
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pflC
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Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
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Position: -69
Score: 4.1 Sequence: ATAAAAAAATTAATAT
Locus tag: CTC01290
Name: rny Funciton: Ribonuclease Y |
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rny
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Ribonuclease Y
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Position: -155
Score: 4.1 Sequence: TTTAAAACTATTATTT
Locus tag: CTC02162
Name: null Funciton: Metal-dependent hydrolase of the beta-lactamase superfamily II |
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Metal-dependent hydrolase of the beta-lactamase superfamily II
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Position: -136
Score: 4.2 Sequence: ATGTAAATTTTAAATT
Locus tag: CTC01362
Name: mepA Funciton: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family |
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mepA
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Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
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Position: -162
Score: 3.9 Sequence: GTGTAAAAATTTACAA
Position: -78
Score: 3.9 Sequence: TTTAAATTAATTAAAT
Position: -32
Score: 3.9 Sequence: TTATAATAGATTTATT
Locus tag: CTC00228
Name: tal Funciton: Transaldolase (EC 2.2.1.2) |
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tal
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Transaldolase (EC 2.2.1.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |