Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Clostridium tetani E88

Properties
Regulator type: Transcription factor
TF locus tag: CTC00263
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Clostridia-1
Statistics of regulated genes:
- Genes 35
- Operons 20
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 436 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -51
Score: 4.2
Sequence: AAGAAAAATATATAAT
Locus tag: CTC02292
Name: null
Funciton: Methyltransferase (EC 2.1.1.-)
Locus tag: CTC02291
Name: hslO
Funciton: Chaperonin
CTC02292
Methyltransferase (EC 2.1.1.-)
CTC02291
hslO
Chaperonin
Position: -167
Score: 4.2
Sequence: ATAAAAACAATATAAA
Position: -148
Score: 4.2
Sequence: AATAAAACGATAAAAA
Locus tag: CTC00566
Name: glsA
Funciton: Glutaminase (EC 3.5.1.2)
CTC00566
glsA
Glutaminase (EC 3.5.1.2)
Position: -163
Score: 4.1
Sequence: TTGAAATAGATATTAA
Locus tag: CTC01186
Name: yxkH
Funciton: Possible polysaccharide deacetylase
CTC01186
yxkH
Possible polysaccharide deacetylase
Position: -78
Score: 4.7
Sequence: ATGAAAACATTTTATA
Locus tag: CTC01570
Name: spoIVB
Funciton: Stage IV sporulation protein B
CTC01570
spoIVB
Stage IV sporulation protein B
Position: -24
Score: 4.7
Sequence: AAGAAAACGTTTTCTT
Locus tag: CTC00886
Name: hom
Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
CTC00886
hom
Homoserine dehydrogenase (EC 1.1.1.3)
Position: -286
Score: 4.3
Sequence: TAGAAAAAAATTAAAA
Locus tag: CTC00230
Name: glcK
Funciton: Glucokinase (EC 2.7.1.2)
CTC00230
glcK
Glucokinase (EC 2.7.1.2)
Position: -32
Score: 3.8
Sequence: AATTAAATATTTATTA
Locus tag: CTC01996
Name: glpF
Funciton: Glycerol uptake facilitator protein
CTC01996
glpF
Glycerol uptake facilitator protein
Position: -169
Score: 4.3
Sequence: ATTAAAAATATTTCAA
Locus tag: CTC01762
Name: dhaK
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: CTC01761
Name: dhaM
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: CTC01760
Name: dhaL
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Locus tag: CTC01759
Name: glpP
Funciton: Glycerol uptake operon antiterminator regulatory protein
Locus tag: CTC01758
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
CTC01762
dhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
CTC01761
dhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
CTC01760
dhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
CTC01759
glpP
Glycerol uptake operon antiterminator regulatory protein
CTC01758
glpK
Glycerol kinase (EC 2.7.1.30)
Position: -143
Score: 4.2
Sequence: TTGAAATCATTATAAT
Locus tag: CTC02462
Name: glpK
Funciton: Glycerol kinase (EC 2.7.1.30)
CTC02462
glpK
Glycerol kinase (EC 2.7.1.30)
Position: -29
Score: 4.1
Sequence: TTTAAAAAAATAATAT
Position: 0
Score: 4.1
Sequence: ATGAAAAAGCTATTTA
Locus tag: CTC00278
Name: gamP
Funciton: PTS system, predicted glucoseamine-specific IICBA component
CTC00278
gamP
PTS system, predicted glucoseamine-specific IICBA component
Position: -39
Score: 4.5
Sequence: ATGAAAAAATTAAAAT
Locus tag: CTC01488
Name: ifcA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
CTC01488
ifcA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Position: -55
Score: 4.5
Sequence: ATTAAAATGATATAAT
Locus tag: CTC00969
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
Locus tag: CTC00970
Name: null
Funciton: Hypothetical protein
Locus tag: CTC00971
Name: lldR
Funciton: Transcription regulator of lactate utilization, GntR family
Locus tag: CTC00972
Name: glcA
Funciton: L-lactate permease
CTC00969
serB
Phosphoserine phosphatase (EC 3.1.3.3)
CTC00970
Hypothetical protein
CTC00971
lldR
Transcription regulator of lactate utilization, GntR family
CTC00972
glcA
L-lactate permease
Position: 42
Score: 4.8
Sequence: ATGAAAAAGATTATAT
Locus tag: CTC00860
Name: mglB
Funciton: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Locus tag: CTC00861
Name: mglA
Funciton: Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
Locus tag: CTC00862
Name: mglC
Funciton: Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
Locus tag: CTC00863
Name: galR
Funciton: Transcription regulator of galactose utilization, LacI family
Locus tag: CTC00864
Name: galT
Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Locus tag: CTC00865
Name: null
Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: CTC00866
Name: galE
Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
CTC00860
mglB
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
CTC00861
mglA
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
CTC00862
mglC
Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3)
CTC00863
galR
Transcription regulator of galactose utilization, LacI family
CTC00864
galT
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
CTC00865
Galactokinase (EC 2.7.1.6)
CTC00866
galE
UDP-glucose 4-epimerase (EC 5.1.3.2)
Position: -122
Score: 4.1
Sequence: TTATAAATAATTTAAA
Locus tag: CTC00263
Name: ccpA
Funciton: Catabolite control protein A, LacI family
CTC00263
ccpA
Catabolite control protein A, LacI family
Position: -113
Score: 4.6
Sequence: TTGAAAAATTTTTAAT
Locus tag: CTC00312
Name: thlA
Funciton: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
CTC00312
thlA
Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -40
Score: 4.1
Sequence: TTAAAAAGGATTAAAT
Locus tag: CTC00936
Name: pflD
Funciton: pyruvate formate-lyase
Locus tag: CTC00937
Name: pflC
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
CTC00936
pflD
pyruvate formate-lyase
CTC00937
pflC
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -69
Score: 4.1
Sequence: ATAAAAAAATTAATAT
Locus tag: CTC01290
Name: rny
Funciton: Ribonuclease Y
CTC01290
rny
Ribonuclease Y
Position: -155
Score: 4.1
Sequence: TTTAAAACTATTATTT
Locus tag: CTC02162
Name: null
Funciton: Metal-dependent hydrolase of the beta-lactamase superfamily II
CTC02162
Metal-dependent hydrolase of the beta-lactamase superfamily II
Position: -136
Score: 4.2
Sequence: ATGTAAATTTTAAATT
Locus tag: CTC01362
Name: mepA
Funciton: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
CTC01362
mepA
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family
Position: -162
Score: 3.9
Sequence: GTGTAAAAATTTACAA
Position: -78
Score: 3.9
Sequence: TTTAAATTAATTAAAT
Position: -32
Score: 3.9
Sequence: TTATAATAGATTTATT
Locus tag: CTC00228
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
CTC00228
tal
Transaldolase (EC 2.2.1.2)
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