Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Clostridium butyricum 5521

Properties
Regulator type: Transcription factor
TF locus tag: CBY_2264
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbohydrate metabolism
Effector: HPr, phosphocarrier protein
Regulog: CcpA - Clostridia-1
Statistics of regulated genes:
- Genes 129
- Operons 54
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 436 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -92
Score: 4.1
Sequence: CTTTAAAAGTTTAAAT
Locus tag: CBY_1585
Name: aroF
Funciton: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
Locus tag: CBY_1586
Name: aroB
Funciton: 3-dehydroquinate synthase (EC 4.2.3.4)
Locus tag: CBY_1587
Name: aroA
Funciton: 5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: CBY_1588
Name: aroC
Funciton: Chorismate synthase (EC 4.2.3.5)
Locus tag: CBY_1589
Name: pheA
Funciton: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
Locus tag: CBY_1590
Name: aroE
Funciton: Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Locus tag: CBY_1591
Name: aroK
Funciton: Shikimate kinase I (EC 2.7.1.71)
CBY_1585
aroF
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta (EC 2.5.1.54)
CBY_1586
aroB
3-dehydroquinate synthase (EC 4.2.3.4)
CBY_1587
aroA
5-enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
CBY_1588
aroC
Chorismate synthase (EC 4.2.3.5)
CBY_1589
pheA
Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) # AroHI/PheAIp/ACT domain
CBY_1590
aroE
Chorismate mutase I (EC 5.4.99.5) / Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
CBY_1591
aroK
Shikimate kinase I (EC 2.7.1.71)
Position: -43
Score: 4.7
Sequence: ATGTAAACGATTTTAA
Locus tag: CBY_1710
Name: mglB
Funciton: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Locus tag: CBY_1711
Name: mglA
Funciton: Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3)
Locus tag: CBY_1712
Name: mglC
Funciton: Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3)
CBY_1710
mglB
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
CBY_1711
mglA
Galactose/methyl galactoside ABC transport system, ATP-binding protein (TC 3.A.1.2.3)
CBY_1712
mglC
Galactose/methyl galactoside ABC transport system, permease protein (TC 3.A.1.2.3)
Position: -228
Score: 4.4
Sequence: AATAAAAAGATTAAAA
Locus tag: CBY_0874
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: CBY_0875
Name: null
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
CBY_0874
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
CBY_0875
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Position: -104
Score: 4.7
Sequence: ATGAAAATGATTACTT
Locus tag: CBY_0862
Name: CBY_0862
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: CBY_0863
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: CBY_0864
Name: null
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Locus tag: CBY_0865
Name: null
Funciton: Putative sugar kinase
Locus tag: CBY_0866
Name: bglA
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
CBY_0862
CBY_0862
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
CBY_0863
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
CBY_0864
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
CBY_0865
Putative sugar kinase
CBY_0866
bglA
6-phospho-beta-glucosidase (EC 3.2.1.86)
Position: -162
Score: 4.1
Sequence: AAGAAAAAAATAACTT
Position: -66
Score: 4.6
Sequence: TTGAAAATATTTTCAA
Locus tag: CBY_0842
Name: nanE
Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: CBY_0841
Name: nanA
Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: CBY_0840
Name: null
Funciton: Predicted sialic acid transporter
Locus tag: CBY_0839
Name: null
Funciton: Conserved hypothetical protein
Locus tag: CBY_0838
Name: nanK
Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: CBY_0837
Name: siaR
Funciton: Transcription regulator of sialic acid utilization, RpiR family
CBY_0842
nanE
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
CBY_0841
nanA
N-acetylneuraminate lyase (EC 4.1.3.3)
CBY_0840
Predicted sialic acid transporter
CBY_0839
Conserved hypothetical protein
CBY_0838
nanK
N-acetylmannosamine kinase (EC 2.7.1.60)
CBY_0837
siaR
Transcription regulator of sialic acid utilization, RpiR family
Position: -114
Score: 4.2
Sequence: ATATAAAATTTTTAAA
Position: -48
Score: 4
Sequence: AATAAAAAATTATTAT
Locus tag: CBY_2409
Name: xylS
Funciton: Alpha-xylosidase (EC 3.2.1.177)
CBY_2409
xylS
Alpha-xylosidase (EC 3.2.1.177)
Position: -42
Score: 4.3
Sequence: ATAAAAATAATTAAAT
Locus tag: CBY_1093
Name: bglP
Funciton: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
CBY_1093
bglP
PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
Position: -170
Score: 4.2
Sequence: ATGTAAAAAATAATAT
Position: -147
Score: 4.1
Sequence: TTGACAACGTTTTCTA
Locus tag: CBY_4099
Name: licT
Funciton: Beta-glucoside bgl operon antiterminator, BglG family
Locus tag: CBY_4098
Name: bglP
Funciton: PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
Locus tag: CBY_4097
Name: bglH2
Funciton: Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
CBY_4099
licT
Beta-glucoside bgl operon antiterminator, BglG family
CBY_4098
bglP
PTS system, beta-glucoside-specific IIBCA component (EC 2.7.1.69)
CBY_4097
bglH2
Aryl-phospho-beta-D-glucosidase (EC 3.2.1.86)
Position: -104
Score: 4.5
Sequence: AAGAAAACATTTACAA
Locus tag: CBY_2074
Name: null
Funciton: PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
Locus tag: CBY_2073
Name: null
Funciton: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
CBY_2074
PTS system, cellobiose-specific IIA component (EC 2.7.1.69)
CBY_2073
PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Position: -116
Score: 4.6
Sequence: AAGAAAATGATTTTAT
Locus tag: CBY_0566
Name: sspA
Funciton: Small acid-soluble spore protein beta
Locus tag: CBY_0565
Name: null
Funciton: Methyltransferase (EC 2.1.1.-)
Locus tag: CBY_0564
Name: hslO
Funciton: Chaperonin
CBY_0566
sspA
Small acid-soluble spore protein beta
CBY_0565
Methyltransferase (EC 2.1.1.-)
CBY_0564
hslO
Chaperonin
Position: -61
Score: 4.5
Sequence: TTGTAAACGATATTAT
Locus tag: CBY_0508
Name: gldA
Funciton: Glycerol dehydrogenase (EC 1.1.1.6)
Locus tag: CBY_0507
Name: dhaK
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: CBY_0506
Name: dhaM
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: CBY_0505
Name: dhaL
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
CBY_0508
gldA
Glycerol dehydrogenase (EC 1.1.1.6)
CBY_0507
dhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
CBY_0506
dhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
CBY_0505
dhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Position: -215
Score: 4.8
Sequence: ATGTAAATGTTTTAAA
Locus tag: CBY_0041
Name: niaX
Funciton: Substrate-specific component NiaX of predicted niacin ECF transporter
CBY_0041
niaX
Substrate-specific component NiaX of predicted niacin ECF transporter
Position: -66
Score: 4.1
Sequence: TTGATAAAAATATAAT
Locus tag: CBY_1562
Name: fucO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
CBY_1562
fucO
Lactaldehyde reductase (EC 1.1.1.77)
Position: -96
Score: 4.2
Sequence: ATGAAATAGTTATATA
Locus tag: CBY_3691
Name: dhaK
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
Locus tag: CBY_3690
Name: dhaM
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
Locus tag: CBY_3689
Name: dhaL
Funciton: Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
CBY_3691
dhaK
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK
CBY_3690
dhaM
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL
CBY_3689
dhaL
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component
Position: -90
Score: 4.3
Sequence: ATGTAAATGTTTACCT
Locus tag: CBY_3009
Name: ispF
Funciton: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
CBY_3009
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12)
Position: -58
Score: 4.6
Sequence: TTGAAAACAATTTCAA
Locus tag: CBY_1729
Name: agaN
Funciton: Alpha-galactosidase (EC 3.2.1.22)
CBY_1729
agaN
Alpha-galactosidase (EC 3.2.1.22)
Position: -164
Score: 4.8
Sequence: ATGAAAACGATTATAA
Position: -32
Score: 4.1
Sequence: TTGTTAACGTTAACTA
Locus tag: CBY_2353
Name: pelX
Funciton: Pectate lyase (EC 4.2.2.9)
CBY_2353
pelX
Pectate lyase (EC 4.2.2.9)
Position: -77
Score: 4
Sequence: ATGTAAATGAATTTTA
Locus tag: CBY_1661
Name: manA
Funciton: Mannose-6-phosphate isomerase (EC 5.3.1.8)
CBY_1661
manA
Mannose-6-phosphate isomerase (EC 5.3.1.8)
Position: -77
Score: 4.1
Sequence: TTGAAATAAATTTATA
Locus tag: CBY_2354
Name: null
Funciton: Uncharacterized ABC transporter, ATP-binding protein
Locus tag: CBY_2355
Name: null
Funciton: Uncharacterized ABC transporter, ATP-binding and permease protein
CBY_2354
Uncharacterized ABC transporter, ATP-binding protein
CBY_2355
Uncharacterized ABC transporter, ATP-binding and permease protein
Position: -73
Score: 4.7
Sequence: AAGAAAACGTTTAAAA
Locus tag: CBY_1564
Name: fucI
Funciton: L-fucose isomerase
Locus tag: CBY_1565
Name: null
Funciton: rhamnulokinase
Locus tag: CBY_1566
Name: fucU
Funciton: L-fucose mutarotase (EC 5.1.3.n2)
Locus tag: CBY_1567
Name: fucA
Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17)
Locus tag: CBY_1568
Name: fucP
Funciton: L-fucose:H+ symporter permease
CBY_1564
fucI
L-fucose isomerase
CBY_1565
rhamnulokinase
CBY_1566
fucU
L-fucose mutarotase (EC 5.1.3.n2)
CBY_1567
fucA
L-fuculose phosphate aldolase (EC 4.1.2.17)
CBY_1568
fucP
L-fucose:H+ symporter permease
Position: -157
Score: 4.6
Sequence: AAGAAAACGTTTAATA
Locus tag: CBY_2072
Name: null
Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: CBY_2071
Name: Cbei_4468
Funciton: Transcriptional regulator, GntR family
Locus tag: CBY_2069
Name: bglC
Funciton: Beta-glucosidase (EC 3.2.1.21)
CBY_2072
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
CBY_2071
Cbei_4468
Transcriptional regulator, GntR family
CBY_2069
bglC
Beta-glucosidase (EC 3.2.1.21)
Position: -98
Score: 4
Sequence: TTTAAAATGTAAAAAT
Locus tag: CBY_0511
Name: null
Funciton: Transcriptional regulator, MarR family
Locus tag: CBY_0510
Name: null
Funciton: Predicted transporter protein
CBY_0511
Transcriptional regulator, MarR family
CBY_0510
Predicted transporter protein
Position: -232
Score: 4.1
Sequence: TTTTAAATATTTATTT
Position: -64
Score: 4.1
Sequence: ATGAAAACAAATATTT
Locus tag: CBY_3649
Name: null
Funciton: Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
CBY_3649
Predicted N-acetylglucosaminyltransferase (EC 2.4.1.-)
Position: -34
Score: 4.5
Sequence: ATGAAATCGATTTAAA
Locus tag: CBY_0850
Name: bglC
Funciton: Aryl-phospho-beta-D-glucosidase (EC3.2.1.86)
CBY_0850
bglC
Aryl-phospho-beta-D-glucosidase (EC3.2.1.86)
Position: -118
Score: 4.1
Sequence: TTAAAAAGGTTTTCAA
Position: -32
Score: 4.5
Sequence: ATGAAAACTATTACAA
Locus tag: CBY_4133
Name: galM
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
Locus tag: CBY_4134
Name: cbgA
Funciton: Beta-galactosidase (EC 3.2.1.23)
CBY_4133
galM
Aldose 1-epimerase (EC 5.1.3.3)
CBY_4134
cbgA
Beta-galactosidase (EC 3.2.1.23)
Position: -241
Score: 4.2
Sequence: TTATAAATATTTTAAA
Position: -95
Score: 4.2
Sequence: ATAAAAAAATTAAAAT
Locus tag: CBY_0558
Name: ytxC
Funciton: Putative sporulation protein YtxC
CBY_0558
ytxC
Putative sporulation protein YtxC
Position: -153
Score: 4.6
Sequence: ATGTAAACAATTAAAT
Locus tag: CBY_0846
Name: bglA
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
CBY_0846
bglA
6-phospho-beta-glucosidase (EC 3.2.1.86)
Position: -93
Score: 4.6
Sequence: ATGAAAAAGTTAAATA
Locus tag: CBY_2799
Name: null
Funciton: Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
CBY_2799
Putative peptidoglycan N-acetylglucosamine deacetylase (EC 3.5.1.-)
Position: -153
Score: 4.6
Sequence: ATGAAAAAAATTAAAA
Locus tag: CBY_2696
Name: null
Funciton: Hypothetical membrane protein
CBY_2696
Hypothetical membrane protein
Position: 55
Score: 4.3
Sequence: CTGAAAATGTTTTCTT
Locus tag: CBY_1726
Name: galK
Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: CBY_1725
Name: galE
Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
Locus tag: CBY_1724
Name: galT
Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
Locus tag: CBY_1723
Name: galR
Funciton: Transcription regulator of galactose utilization, LacI family
CBY_1726
galK
Galactokinase (EC 2.7.1.6)
CBY_1725
galE
UDP-glucose 4-epimerase (EC 5.1.3.2)
CBY_1724
galT
Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
CBY_1723
galR
Transcription regulator of galactose utilization, LacI family
Position: -222
Score: 4.6
Sequence: AAGAAAATGTTTACAA
Locus tag: CBY_3247
Name: ltaE
Funciton: Low-specificity L-threonine aldolase (EC 4.1.2.5)
CBY_3247
ltaE
Low-specificity L-threonine aldolase (EC 4.1.2.5)
Position: -77
Score: 4.5
Sequence: ATGATAATGTTTATAT
Locus tag: CBY_1741
Name: null
Funciton: PTS system, cellobiose-specific IIB component
CBY_1741
PTS system, cellobiose-specific IIB component
Position: -122
Score: 4.1
Sequence: TTTTAAATAATTAAAA
Locus tag: CBY_4067
Name: cggR
Funciton: Central glycolytic genes regulator
Locus tag: CBY_4068
Name: gapC
Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Locus tag: CBY_4069
Name: pgk
Funciton: Phosphoglycerate kinase (EC 2.7.2.3)
CBY_4067
cggR
Central glycolytic genes regulator
CBY_4068
gapC
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
CBY_4069
pgk
Phosphoglycerate kinase (EC 2.7.2.3)
Position: -220
Score: 4.6
Sequence: AAGTAAAAGTTTTCAT
Position: -195
Score: 4.6
Sequence: TTGAAAATATTTTTAT
Position: -84
Score: 4.2
Sequence: ATGATAATAATTTATA
Locus tag: CBY_1888
Name: cheY
Funciton: Chemotaxis protein cheY
Locus tag: CBY_1887
Name: cheX
Funciton: Chemotaxis protein CheX
CBY_1888
cheY
Chemotaxis protein cheY
CBY_1887
cheX
Chemotaxis protein CheX
Position: -101
Score: 4.6
Sequence: TTGTAAACGTTTATTT
Locus tag: CBY_1978
Name: pflD
Funciton: pyruvate formate-lyase
Locus tag: CBY_1977
Name: pflC
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
CBY_1978
pflD
pyruvate formate-lyase
CBY_1977
pflC
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -226
Score: 4.6
Sequence: TTGTAAAAGTTTACTT
Locus tag: CBY_2940
Name: malH
Funciton: Maltose/maltodextrin ABC transporter, periplasmic component
Locus tag: CBY_2941
Name: malF
Funciton: Maltose/maltodextrin ABC transporter, permease protein MalF
Locus tag: CBY_2942
Name: malG
Funciton: Maltose/maltodextrin ABC transporter, permease protein MalG
Locus tag: CBY_2943
Name: malQ
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
CBY_2940
malH
Maltose/maltodextrin ABC transporter, periplasmic component
CBY_2941
malF
Maltose/maltodextrin ABC transporter, permease protein MalF
CBY_2942
malG
Maltose/maltodextrin ABC transporter, permease protein MalG
CBY_2943
malQ
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Position: -250
Score: 4.3
Sequence: ATGTAAATGTTTTAAG
Locus tag: CBY_3688
Name: kdpA
Funciton: Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Locus tag: CBY_3687
Name: kdpB
Funciton: Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Locus tag: CBY_3686
Name: kdpC
Funciton: Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
Locus tag: CBY_3685
Name: null
Funciton: hypothetical protein
Locus tag: CBY_3684
Name: kdpD
Funciton: Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
Locus tag: CBY_3683
Name: kdpE
Funciton: Transcription regulator of potassium transport, OmpR family
CBY_3688
kdpA
Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CBY_3687
kdpB
Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CBY_3686
kdpC
Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)
CBY_3685
hypothetical protein
CBY_3684
kdpD
Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
CBY_3683
kdpE
Transcription regulator of potassium transport, OmpR family
Position: -370
Score: 4.2
Sequence: ATGAAAATAAATTAAA
Locus tag: CBY_1459
Name: ptnA
Funciton: PTS system, mannose-specific IIBA component (EC 2.7.1.69)
Locus tag: CBY_1460
Name: manY
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: CBY_1461
Name: ptnD
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
CBY_1459
ptnA
PTS system, mannose-specific IIBA component (EC 2.7.1.69)
CBY_1460
manY
PTS system, mannose-specific IIC component (EC 2.7.1.69)
CBY_1461
ptnD
PTS system, mannose-specific IID component (EC 2.7.1.69)
Position: -147
Score: 4.1
Sequence: TAATAAATGATTAAAT
Position: -99
Score: 4.7
Sequence: ATTAAAACGTTTAAAA
Locus tag: CBY_1554
Name: galU
Funciton: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
CBY_1554
galU
UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)
Position: -223
Score: 4.1
Sequence: TTGAAAAAATTTTAGT
Position: -130
Score: 4.1
Sequence: AAGAAATAAATTTAAT
Locus tag: CBY_3256
Name: glcA
Funciton: L-lactate permease
CBY_3256
glcA
L-lactate permease
Position: -80
Score: 4.6
Sequence: ATAAAAAAGTTTTAAA
Locus tag: CBY_0413
Name: lrgA
Funciton: Antiholin-like protein LrgA
Locus tag: CBY_0412
Name: lrgB
Funciton: LrgA-associated membrane protein LrgB
Locus tag: CBY_0411
Name: null
Funciton: Hypothetical protein
Locus tag: CBY_0410
Name: null
Funciton: Transcriptional regulator, GntR family
CBY_0413
lrgA
Antiholin-like protein LrgA
CBY_0412
lrgB
LrgA-associated membrane protein LrgB
CBY_0411
Hypothetical protein
CBY_0410
Transcriptional regulator, GntR family
Position: -186
Score: 4.4
Sequence: AATTAAATGTTTAAAT
Locus tag: CBY_3642
Name: nifJ2
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
CBY_3642
nifJ2
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -228
Score: 4.1
Sequence: TTTATAAAAATTTAAT
Locus tag: CBY_1889
Name: nifJ2
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
CBY_1889
nifJ2
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -166
Score: 4.3
Sequence: TTGTAAACAATAAAAA
Locus tag: CBY_0233
Name: nifJ2
Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
CBY_0233
nifJ2
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
Position: -77
Score: 4.2
Sequence: ATATTAACGTTTTTAT
Position: -73
Score: 3.9
Sequence: AAGTAAAAAAATTAAT
Locus tag: CBY_2984
Name: lacR
Funciton: Lactose phosphotransferase system repressor lacR
Locus tag: CBY_2985
Name: CBY_2985
Funciton: PTS system, putative lactose-specific IIBC component (EC 2.7.1.69)
Locus tag: CBY_2986
Name: CBY_2986
Funciton: PTS system, putative lactose-specific IIB component (EC 2.7.1.69)
Locus tag: CBY_2987
Name: CBY_2987
Funciton: PTS system, putative lactose-specific IIC component (EC 2.7.1.69)
Locus tag: CBY_2988
Name: lacA
Funciton: Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
Locus tag: CBY_2989
Name: lacB
Funciton: Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
Locus tag: CBY_2990
Name: agaY
Funciton: Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
CBY_2984
lacR
Lactose phosphotransferase system repressor lacR
CBY_2985
CBY_2985
PTS system, putative lactose-specific IIBC component (EC 2.7.1.69)
CBY_2986
CBY_2986
PTS system, putative lactose-specific IIB component (EC 2.7.1.69)
CBY_2987
CBY_2987
PTS system, putative lactose-specific IIC component (EC 2.7.1.69)
CBY_2988
lacA
Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
CBY_2989
lacB
Galactose-6-phosphate isomerase, LacB subunit (EC 5.3.1.26)
CBY_2990
agaY
Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-)
Position: -150
Score: 4.2
Sequence: TTGAAAATATTAATTA
Position: -40
Score: 4.1
Sequence: ATTTAAATTATTATAT
Locus tag: CBY_0247
Name: uxaB
Funciton: Altronate oxidoreductase (EC 1.1.1.58)
Locus tag: CBY_0246
Name: uxaA
Funciton: Altronate hydrolase (EC 4.2.1.7)
Locus tag: CBY_0245
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
CBY_0247
uxaB
Altronate oxidoreductase (EC 1.1.1.58)
CBY_0246
uxaA
Altronate hydrolase (EC 4.2.1.7)
CBY_0245
kduD
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
Position: -95
Score: 4
Sequence: AATAAAAATATATAAT
Locus tag: CBY_2431
Name: xylR
Funciton: Transcription repressor of xylose utilization, ROK family
CBY_2431
xylR
Transcription repressor of xylose utilization, ROK family
Position: -72
Score: 4.1
Sequence: TTTAAAAAGTATTTTT
Position: -42
Score: 4.2
Sequence: TATAAAACTTTTTAAA
Locus tag: CBY_2380
Name: null
Funciton: Hypothetical protein
Locus tag: CBY_2379
Name: null
Funciton: Predicted xylose isomerase
CBY_2380
Hypothetical protein
CBY_2379
Predicted xylose isomerase
Position: -66
Score: 4
Sequence: TATAAAAAGTTATTTA
Locus tag: CBY_3808
Name: ulaE
Funciton: L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22)
Locus tag: CBY_3807
Name: tkt2
Funciton: Putative transketolase
Locus tag: CBY_3806
Name: tkt3
Funciton: Transketolase
Locus tag: CBY_3805
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
Locus tag: CBY_3804
Name: rpe
Funciton: Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
CBY_3808
ulaE
L-ribulose-5-phosphate 3-epimerase (EC 5.1.3.22)
CBY_3807
tkt2
Putative transketolase
CBY_3806
tkt3
Transketolase
CBY_3805
tal
Transaldolase (EC 2.2.1.2)
CBY_3804
rpe
Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
Position: -77
Score: 3.9
Sequence: TTTAAAAAGAATTTTA
Position: -57
Score: 4.5
Sequence: TTAAAAATGTTTTTAT
Position: -34
Score: 4.6
Sequence: TTGTAAATGTTTAATA
Locus tag: CBY_2342
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: CBY_2343
Name: xylR
Funciton: Transcription repressor of xylose utilization, ROK family
Locus tag: CBY_2344
Name: tal
Funciton: Transaldolase (EC 2.2.1.2)
Locus tag: CBY_2345
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
CBY_2342
xylB
Xylulose kinase (EC 2.7.1.17)
CBY_2343
xylR
Transcription repressor of xylose utilization, ROK family
CBY_2344
tal
Transaldolase (EC 2.2.1.2)
CBY_2345
tkt
Transketolase (EC 2.2.1.1)
Position: -76
Score: 4.1
Sequence: ATGAATAAATTTACAA
Position: -59
Score: 3.9
Sequence: ATGATTAAGATTTTAA
Position: -42
Score: 3.9
Sequence: TGGAAAACATTTGAAT
Locus tag: CBY_2438
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
CBY_2438
tkt
Transketolase (EC 2.2.1.1)
Position: -115
Score: 4.4
Sequence: AAGAAAATATTTACAA
Position: -41
Score: 4.2
Sequence: TTGTTAACGATAACAA
Locus tag: CBY_3715
Name: pelL2
Funciton: Pectate lyase, secreted, polysaccharide lyase family
CBY_3715
pelL2
Pectate lyase, secreted, polysaccharide lyase family
Position: -54
Score: 4.4
Sequence: ATGTAAATAATTACAA
Locus tag: CBY_0242
Name: null
Funciton: Conserved hypothetical protein
Locus tag: CBY_0241
Name: null
Funciton: Predicted polysaccharide deacetylase
CBY_0242
Conserved hypothetical protein
CBY_0241
Predicted polysaccharide deacetylase
Position: -52
Score: 3.9
Sequence: AAATAAATAATTTTAT
Locus tag: CBY_0240
Name: null
Funciton: Permease of the Na:galactoside symporter family
Locus tag: CBY_0239
Name: CBY_0239
Funciton: Glycoside hydrolase
CBY_0240
Permease of the Na:galactoside symporter family
CBY_0239
CBY_0239
Glycoside hydrolase
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