Statistics of regulated genes

Genome	Genes	Operons
Sinorhizobium meliloti 1021	32	12
Rhizobium sp. NGR234	22	9
Rhizobium leguminosarum bv. viciae 3841
Rhizobium etli CFN 42	14	5
Agrobacterium tumefaciens str. C58 (Cereon)	18	8
Mesorhizobium sp. BNC1	22	12
Mesorhizobium loti MAFF303099
Brucella melitensis 16M	18	5
Bartonella quintana str. Toulouse
Rhodopseudomonas palustris CGA009	25	11
Bradyrhizobium japonicum USDA 110	23	13
Bradyrhizobium sp. BTAi1	21	10
Nitrobacter winogradskyi Nb-255
Azorhizobium caulinodans ORS 571
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
Meso_4284	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	* Mesorhizobium sp. BNC1 Site: position = -142 score = 5.55449 sequence = CTTTGCGCTAGCGCAAAC Gene: Meso_4284: hypothetical protein	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	hypothetical protein
SMa1259	Sinorhizobium meliloti 1021 Gene: SMa1259: hypothetical protein	Rhizobium sp. NGR234 Gene: NGR_c09910: hypothetical protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00521: hypothetical protein	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1 Gene: Meso_4283: hypothetical protein	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0994: hypothetical protein	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	hypothetical protein
PF10006	Sinorhizobium meliloti 1021 Gene: SMa1256: putative universal stress protein	Rhizobium sp. NGR234 Gene: NGR_c09920: putative universal stress protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00522: putative universal stress protein	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1 Gene: Meso_4282: putative universal stress protein	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0993: putative universal stress protein	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	putative universal stress protein
PF01883	Sinorhizobium meliloti 1021 Gene: SMa1255: PaaD-like protein (DUF59) involved in Fe-S cluster assembly	Rhizobium sp. NGR234 Gene: NGR_c09930: PaaD-like protein (DUF59) involved in Fe-S cluster assembly	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00523: PaaD-like protein (DUF59) involved in Fe-S cluster assembly	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1 Gene: Meso_4281: PaaD-like protein (DUF59) involved in Fe-S cluster assembly	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0992: PaaD-like protein (DUF59) involved in Fe-S cluster assembly	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	PaaD-like protein (DUF59) involved in Fe-S cluster assembly
PF01152	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1 Gene: Meso_4280: Truncated hemoglobin	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0398: Truncated hemoglobin	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2719: Truncated hemoglobin	* Bradyrhizobium japonicum USDA 110 Site: position = -91 score = 4.95856 sequence = ATTTGCGCTGCGACAAAG Gene: bll6222: Truncated hemoglobin	Bradyrhizobium sp. BTAi1 Gene: BBta_6298: Truncated hemoglobin	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	2 Xanthobacter autotrophicus Py2 Gene: Xaut_4232: Truncated hemoglobin Gene: Xaut_5029: Truncated hemoglobin	Truncated hemoglobin
PF00034	* Sinorhizobium meliloti 1021 Site: position = -84 score = 4.68016 sequence = GTTTGCTCCCCGTCAAAG Gene: SMa1261: hypothetical protein	* Rhizobium sp. NGR234 Site: position = -169 score = 4.18613 sequence = CTTTGACCAATATCAAGG Site: position = -123 score = 4.68016 sequence = GTTTGCTCGGCGTCAAAG Gene: NGR_c09900: hypothetical protein	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium etli CFN 42 Site: position = -114 score = 4.33181 sequence = ATTTGTCCGCTGTCAAAG Gene: RHE_PF00520: hypothetical protein	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	hypothetical protein
CRON 2.
azu1	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	*3 Mesorhizobium sp. BNC1 Site: position = -86 score = 4.91392 sequence = GTTTGCGTTGCAGCAAAG Gene: Meso_4276: Pseudoazurin precursor Site: position = -81 score = 5.20417 sequence = CTTTGCGCGAGCGCAAAT Gene: Meso_2245: Pseudoazurin precursor Gene: Meso_4110: Pseudoazurin precursor	Mesorhizobium loti MAFF303099	* Brucella melitensis 16M Site: position = -120 score = 4.12866 sequence = GTTTGATTTTAATCAAAG Gene: BMEII0965: Pseudoazurin precursor	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Pseudoazurin precursor
nnrS	* Sinorhizobium meliloti 1021 Site: position = -173 score = 4.8384 sequence = CTTTGAGGTGGAACAAAC Site: position = -72 score = 4.66159 sequence = CTTTGCCAATTGTCAAAG Gene: SMa1252: NnrS protein involved in response to NO	* Rhizobium sp. NGR234 Site: position = -177 score = 4.66072 sequence = CTTTGAGGTGGAACAAAT Site: position = -73 score = 4.66159 sequence = CTTTGCCAATTGTCAAAG Gene: NGR_c09940: NnrS protein involved in response to NO	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium etli CFN 42 Site: position = -125 score = 5.06364 sequence = CTTTGACGTGGCGCAAAC Site: position = -102 score = 5.23563 sequence = GTTTGTGCCGGCACAAAG Site: position = -71 score = 4.65658 sequence = CTTTGCGTAATCTCAACG Gene: RHE_PF00524: NnrS protein involved in response to NO	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -159 score = 4.52797 sequence = ATTTGAGATGGAACAAAC Site: position = -73 score = 4.84965 sequence = CTTTGCCTGTTCGCAAAG Gene: Atu4383: NnrS protein involved in response to NO	Mesorhizobium sp. BNC1 Gene: Meso_4275: NnrS protein involved in response to NO	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0964: NnrS protein involved in response to NO	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -89 score = 4.99995 sequence = GTTTGCGCTGGCACAACC Gene: RPA1486: NnrS protein involved in response to NO	* Bradyrhizobium japonicum USDA 110 Site: position = -79 score = 4.95864 sequence = GTTTGCGATAGCGCAAAA Gene: bll7083: NnrS protein involved in response to NO	* Bradyrhizobium sp. BTAi1 Site: position = -100 score = 4.87784 sequence = GTTTGTGCTGGCACAACC Gene: BBta_6821: NnrS protein involved in response to NO	Nitrobacter winogradskyi Nb-255 Gene: Nwi_0557: NnrS protein involved in response to NO	Azorhizobium caulinodans ORS 571 Gene: AZC_1433: NnrS protein involved in response to NO	Xanthobacter autotrophicus Py2	NnrS protein involved in response to NO
CRON 3.
norE	* Sinorhizobium meliloti 1021 Site: position = -57 score = 4.88184 sequence = CTTTGATCGAGAGCAAAG Gene: SMa1279: Nitric oxide reductase activation protein NorE	* Rhizobium sp. NGR234 Site: position = -69 score = 5.13321 sequence = CTTTGATCAAGCGCAAAG Gene: NGR_c09840: Nitric oxide reductase activation protein NorE	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium etli CFN 42 Site: position = -60 score = 5.02835 sequence = CTTTGCGATCGGTCAAAG Gene: RHE_PF00514: Nitric oxide reductase activation protein NorE	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -76 score = 5.04471 sequence = CTTTGACCGACCGCAAAG Gene: Atu4391: Nitric oxide reductase activation protein NorE	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	* Brucella melitensis 16M Site: position = -51 score = 5.02229 sequence = CTTTGCCAAAACGCAAAG Gene: BMEII1001: Nitric oxide reductase activation protein NorE	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -86 score = 4.37002 sequence = GTTTGTCGGGGCGCAAGC Site: position = -49 score = 4.6981 sequence = GTTTGTCGCGGCACAACG Gene: RPA1453: Nitric oxide reductase activation protein NorE	* Bradyrhizobium japonicum USDA 110 Site: position = -108 score = 4.95985 sequence = CGTTGCGTCGGCGCAAAC Site: position = -71 score = 4.48205 sequence = GTTTGTCCGCCGACAAAC Gene: blr3212: Nitric oxide reductase activation protein NorE	* Bradyrhizobium sp. BTAi1 Site: position = -68 score = 4.84148 sequence = GTTTGTGCGGCGACAAAG Gene: BBta_2086: Nitric oxide reductase activation protein NorE	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric oxide reductase activation protein NorE
norF	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu8197: Nitric oxide reductase activation protein NorF	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII1000: Nitric oxide reductase activation protein NorF	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA1454: Nitric oxide reductase activation protein NorF	Bradyrhizobium japonicum USDA 110 Gene: bsr3213: Nitric oxide reductase activation protein NorF	Bradyrhizobium sp. BTAi1 Gene: BBta_2087: Nitric oxide reductase activation protein NorF	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric oxide reductase activation protein NorF
CRON 4.
nnrX	* Sinorhizobium meliloti 1021 Site: position = -88 score = 5.12865 sequence = CTTTGCTCCAGCGCAAAT Gene: SMa1289: Putative lipid carrier protein	* Rhizobium sp. NGR234 Site: position = -80 score = 5.14479 sequence = CTTTGCGCTGGCTCAAAT Gene: NGR_c09800: Putative lipid carrier protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -75 score = 4.94584 sequence = CTTTGCGTTCGCTCAAAC Gene: Atu4396: Putative lipid carrier protein	Mesorhizobium sp. BNC1 Gene: Meso_4295: Putative lipid carrier protein	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0958: Putative lipid carrier protein	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -67 score = 5.0959 sequence = CTTTGATCAGGCGCAAAG Gene: RPA0932: Putative lipid carrier protein	* Bradyrhizobium japonicum USDA 110 Site: position = -50 score = 4.19294 sequence = CATTGTTCCCGCTCAAAT Gene: bll7628: Putative lipid carrier protein	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Putative lipid carrier protein
PF01136	Sinorhizobium meliloti 1021 Gene: SMa1291: Putative protease	Rhizobium sp. NGR234 Gene: NGR_c09790: Putative protease	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4397: Putative protease	Mesorhizobium sp. BNC1 Gene: Meso_4296: Putative protease	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0959: Putative protease	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA0933: Putative protease	Bradyrhizobium japonicum USDA 110 Gene: bll7627: Putative protease	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Putative protease
PF01136	Sinorhizobium meliloti 1021 Gene: SMa1292: Putative protease	Rhizobium sp. NGR234 Gene: NGR_c09780: Putative protease	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4398: Putative protease	Mesorhizobium sp. BNC1 Gene: Meso_4297: Putative protease	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0960: Putative protease	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA0934: Putative protease	Bradyrhizobium japonicum USDA 110 Gene: bll7626: Putative protease	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Putative protease
SMa1294	Sinorhizobium meliloti 1021 Gene: SMa1294: hypothetical protein	Rhizobium sp. NGR234 Gene: NGR_c09770: hypothetical protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4399: hypothetical protein	* Mesorhizobium sp. BNC1 Site: position = -229 score = 5.40078 sequence = GTTTGCGCTGGCGCAAAC Gene: Meso_4290: hypothetical protein	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	hypothetical protein
Meso_4294	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	* Mesorhizobium sp. BNC1 Site: position = -70 score = 4.81419 sequence = CTTTGCGGAAGTGCAAAG Gene: Meso_4294: hypothetical protein	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	hypothetical protein
CRON 5.
ubiD	* Sinorhizobium meliloti 1021 Site: position = -107 score = 5.12865 sequence = ATTTGCGCTGGAGCAAAG Gene: SMa1288: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	* Rhizobium sp. NGR234 Site: position = -50 score = 5.14479 sequence = ATTTGAGCCAGCGCAAAG Gene: NGR_c09810: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -20 score = 4.7112 sequence = ATTTGCGGCAGCGCAAGG Gene: Atu4394: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	* Mesorhizobium sp. BNC1 Site: position = -65 score = 4.81419 sequence = CTTTGCACTTCCGCAAAG Gene: Meso_4293: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0957: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -66 score = 5.0959 sequence = CTTTGCGCCTGATCAAAG Gene: RPA0931: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	* Bradyrhizobium japonicum USDA 110 Site: position = -15 score = 4.19294 sequence = ATTTGAGCGGGAACAATG Gene: blr7629: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
ubiX	Sinorhizobium meliloti 1021 Gene: SMa1285: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4393: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Mesorhizobium sp. BNC1 Gene: Meso_4292: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0956: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA0930: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Bradyrhizobium japonicum USDA 110 Gene: blr7630: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
CRON 6.
PF02915	* Sinorhizobium meliloti 1021 Site: position = -107 score = 4.65523 sequence = CTTTGCGCCAGATCAACT Gene: SMa1178: Rubrerythrin	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -57 score = 5.04543 sequence = ATTTGCGCCAGCGCAAAT Gene: RPA2059: Rubrerythrin	Bradyrhizobium japonicum USDA 110 Gene: bll0313: Rubrerythrin	* Bradyrhizobium sp. BTAi1 Site: position = -103 score = 4.83291 sequence = CGTTGCGCTGGATCAAAC Gene: BBta_6006: Rubrerythrin	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Rubrerythrin
CRON 7.
nosR	* Sinorhizobium meliloti 1021 Site: position = -82 score = 4.65523 sequence = AGTTGATCTGGCGCAAAG Gene: SMa1179: Nitrous oxide reductase maturation protein	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	* Brucella melitensis 16M Site: position = -233 score = 3.94462 sequence = CTTTGCGTCATATCAATA Gene: BMEII0975: Nitrous oxide reductase maturation protein	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -128 score = 5.04543 sequence = ATTTGCGCTGGCGCAAAT Gene: RPA2060: Nitrous oxide reductase maturation protein	* Bradyrhizobium japonicum USDA 110 Site: position = -133 score = 4.51804 sequence = GCTTGATCCAGCGCAAAC Gene: blr0314: Nitrous oxide reductase maturation protein	* Bradyrhizobium sp. BTAi1 Site: position = -181 score = 4.83291 sequence = GTTTGATCCAGCGCAACG Gene: BBta_6007: Nitrous oxide reductase maturation protein	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous oxide reductase maturation protein
nosZ	Sinorhizobium meliloti 1021 Gene: SMa1182: Nitrous-oxide reductase (EC 1.7.99.6)	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	2 Brucella melitensis 16M Gene: BMEII0974: Nitrous-oxide reductase (EC 1.7.99.6) Gene: BMEII0973: Nitrous-oxide reductase (EC 1.7.99.6)	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2061: Nitrous-oxide reductase (EC 1.7.99.6)	Bradyrhizobium japonicum USDA 110 Gene: blr0315: Nitrous-oxide reductase (EC 1.7.99.6)	Bradyrhizobium sp. BTAi1 Gene: BBta_6008: Nitrous-oxide reductase (EC 1.7.99.6)	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous-oxide reductase (EC 1.7.99.6)
nosD	Sinorhizobium meliloti 1021 Gene: SMa1183: Nitrous oxide reductase maturation protein NosD	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0972: Nitrous oxide reductase maturation protein NosD	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2062: Nitrous oxide reductase maturation protein NosD	Bradyrhizobium japonicum USDA 110 Gene: blr0316: Nitrous oxide reductase maturation protein NosD	Bradyrhizobium sp. BTAi1 Gene: BBta_6009: Nitrous oxide reductase maturation protein NosD	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous oxide reductase maturation protein NosD
nosF	Sinorhizobium meliloti 1021 Gene: SMa1184: Nitrous oxide reductase maturation protein NosF (ATPase)	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0971: Nitrous oxide reductase maturation protein NosF (ATPase)	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2063: Nitrous oxide reductase maturation protein NosF (ATPase)	Bradyrhizobium japonicum USDA 110 Gene: blr0317: Nitrous oxide reductase maturation protein NosF (ATPase)	Bradyrhizobium sp. BTAi1 Gene: BBta_6010: Nitrous oxide reductase maturation protein NosF (ATPase)	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous oxide reductase maturation protein NosF (ATPase)
nosY	Sinorhizobium meliloti 1021 Gene: SMa1185: Nitrous oxide reductase maturation transmembrane protein NosY	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0970: Nitrous oxide reductase maturation transmembrane protein NosY	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2064: Nitrous oxide reductase maturation transmembrane protein NosY	Bradyrhizobium japonicum USDA 110 Gene: blr0318: Nitrous oxide reductase maturation transmembrane protein NosY	Bradyrhizobium sp. BTAi1 Gene: BBta_6011: Nitrous oxide reductase maturation transmembrane protein NosY	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous oxide reductase maturation transmembrane protein NosY
nosL	Sinorhizobium meliloti 1021 Gene: SMa1186: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0969: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2065: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL	Bradyrhizobium japonicum USDA 110 Gene: blr0319: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL	Bradyrhizobium sp. BTAi1 Gene: BBta_6012: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL
BMEII0968	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0968: NOSX	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	NOSX
nosX	Sinorhizobium meliloti 1021 Gene: SMa1188: Nitrous oxide reductase maturation periplasmic protein NosX	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0967: Nitrous oxide reductase maturation periplasmic protein NosX	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA2066: Nitrous oxide reductase maturation periplasmic protein NosX	Bradyrhizobium japonicum USDA 110 Gene: blr0320: Nitrous oxide reductase maturation periplasmic protein NosX	Bradyrhizobium sp. BTAi1 Gene: BBta_6013: Nitrous oxide reductase maturation periplasmic protein NosX	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrous oxide reductase maturation periplasmic protein NosX
hmp	Sinorhizobium meliloti 1021 Gene: SMa1191: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
CRON 8.
dnrN	* Sinorhizobium meliloti 1021 Site: position = -141 score = 5.42238 sequence = GTTTGCGCAAGCGCAAAG Gene: SMa1195: Nitric oxide-dependent regulator DnrN or NorA	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric oxide-dependent regulator DnrN or NorA
nnrS2	Sinorhizobium meliloti 1021 Gene: SMa1194: NnrS protein involved in response to NO	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	* Mesorhizobium sp. BNC1 Site: position = -83 score = 5.40078 sequence = GTTTGCGCCAGCGCAAAC Gene: Meso_4289: NnrS protein involved in response to NO	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	NnrS protein involved in response to NO
CRON 9.
PF08984	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	* Mesorhizobium sp. BNC1 Site: position = -74 score = 5.13794 sequence = CTTTGCGCAAGCACAACG Gene: Meso_2247: nitric oxide reductase subunit C, cytochrome c	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	* Bradyrhizobium japonicum USDA 110 Site: position = -64 score = 4.42059 sequence = GCTTGCGCTCCAACAAAG Gene: bsl7085: nitric oxide reductase subunit C, cytochrome c	* Bradyrhizobium sp. BTAi1 Site: position = -101 score = 4.6981 sequence = GGTTGTGCCGCGACAAAG Gene: BBta_6823: nitric oxide reductase subunit C, cytochrome c	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	nitric oxide reductase subunit C, cytochrome c
CRON 10.
hemN	* Sinorhizobium meliloti 1021 Site: position = -85 score = 5.06888 sequence = CTTTGACATTGCGCAAAG Gene: SMa1266: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	* Rhizobium sp. NGR234 Site: position = -129 score = 4.68016 sequence = CTTTGACGCCGAGCAAAC Site: position = -83 score = 4.18613 sequence = CCTTGATATTGGTCAAAG Gene: NGR_c09890: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PD00262: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099 Gene: mlr6390: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	*2 Bradyrhizobium japonicum USDA 110 Site: position = -74 score = 4.8433 sequence = GTTTGACATAACGCAAAG Gene: bll2007: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) Site: position = -142 score = 5.052 sequence = CTTTGCGCGAGCGCAATG Site: position = -104 score = 5.02105 sequence = CTTTGCGCGAGCGCAAGG Gene: bll7086: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	* Bradyrhizobium sp. BTAi1 Site: position = -160 score = 5.19295 sequence = CTTTGAGGAAGCGCAAAG Site: position = -87 score = 4.63485 sequence = CTTTGAGCAGGCTCAAGG Gene: BBta_6824: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
CRON 11.
norC	* Sinorhizobium meliloti 1021 Site: position = -145 score = 4.92226 sequence = GTTTGCCGAAACGCAAAG Gene: SMa1276: Nitric-oxide reductase subunit C (EC 1.7.99.7)	* Rhizobium sp. NGR234 Site: position = -142 score = 4.4565 sequence = GTTTGCAGAAACGCAAAG Gene: NGR_c09850: Nitric-oxide reductase subunit C (EC 1.7.99.7)	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium etli CFN 42 Site: position = -112 score = 4.73877 sequence = CTTTGCGAATTAACAAAG Gene: RHE_PF00515: Nitric-oxide reductase subunit C (EC 1.7.99.7)	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -138 score = 4.87202 sequence = GTTTGCCAAATGGCAAAG Gene: Atu4389: Nitric-oxide reductase subunit C (EC 1.7.99.7)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	* Brucella melitensis 16M Site: position = -144 score = 4.89018 sequence = CTTTGCCTATTCGCAAAG Gene: BMEII0999: Nitric-oxide reductase subunit C (EC 1.7.99.7)	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -101 score = 5.03803 sequence = CGTTGAGCCAGCACAAAG Gene: RPA1455: Nitric-oxide reductase subunit C (EC 1.7.99.7)	* Bradyrhizobium japonicum USDA 110 Site: position = -89 score = 4.61739 sequence = CATTGCGCCCTGACAAAG Gene: blr3214: Nitric-oxide reductase subunit C (EC 1.7.99.7)	* Bradyrhizobium sp. BTAi1 Site: position = -85 score = 4.80128 sequence = CGTTGCGCCCCGACAAAG Gene: BBta_2088: Nitric-oxide reductase subunit C (EC 1.7.99.7)	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric-oxide reductase subunit C (EC 1.7.99.7)
norB	Sinorhizobium meliloti 1021 Gene: SMa1273: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Rhizobium sp. NGR234 Gene: NGR_c09860: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00516: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4388: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0998: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA1456: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Bradyrhizobium japonicum USDA 110 Gene: blr3215: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Bradyrhizobium sp. BTAi1 Gene: BBta_2089: Nitric-oxide reductase subunit B (EC 1.7.99.7)	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric-oxide reductase subunit B (EC 1.7.99.7)
norQ	Sinorhizobium meliloti 1021 Gene: SMa1272: Nitric oxide reductase activation protein NorQ	Rhizobium sp. NGR234 Gene: NGR_c09870: Nitric oxide reductase activation protein NorQ	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00517: Nitric oxide reductase activation protein NorQ	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4387: Nitric oxide reductase activation protein NorQ	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0997: Nitric oxide reductase activation protein NorQ	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA1457: Nitric oxide reductase activation protein NorQ	Bradyrhizobium japonicum USDA 110 Gene: blr3216: Nitric oxide reductase activation protein NorQ	Bradyrhizobium sp. BTAi1 Gene: BBta_2090: Nitric oxide reductase activation protein NorQ	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric oxide reductase activation protein NorQ
norD	Sinorhizobium meliloti 1021 Gene: SMa1269: Nitric oxide reductase activation protein NorD	Rhizobium sp. NGR234 Gene: NGR_c09880: Nitric oxide reductase activation protein NorD	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00518: Nitric oxide reductase activation protein NorD	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4386: Nitric oxide reductase activation protein NorD	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0996: Nitric oxide reductase activation protein NorD	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA1458: Nitric oxide reductase activation protein NorD	Bradyrhizobium japonicum USDA 110 Gene: blr3217: Nitric oxide reductase activation protein NorD	Bradyrhizobium sp. BTAi1 Gene: BBta_2091: Nitric oxide reductase activation protein NorD	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric oxide reductase activation protein NorD
CRON 12.
nirK	* Sinorhizobium meliloti 1021 Site: position = -191 score = 4.66159 sequence = CTTTGACAATTGGCAAAG Site: position = -90 score = 4.8384 sequence = GTTTGTTCCACCTCAAAG Gene: SMa1250: Copper-containing nitrite reductase (EC 1.7.2.1)	* Rhizobium sp. NGR234 Site: position = -195 score = 4.66159 sequence = CTTTGACAATTGGCAAAG Site: position = -91 score = 4.66072 sequence = ATTTGTTCCACCTCAAAG Gene: NGR_c09950: Copper-containing nitrite reductase (EC 1.7.2.1)	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium etli CFN 42 Site: position = -148 score = 4.65658 sequence = CGTTGAGATTACGCAAAG Site: position = -117 score = 5.23563 sequence = CTTTGTGCCGGCACAAAC Site: position = -94 score = 5.06364 sequence = GTTTGCGCCACGTCAAAG Gene: RHE_PF00525: Copper-containing nitrite reductase (EC 1.7.2.1)	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -181 score = 4.84965 sequence = CTTTGCGAACAGGCAAAG Site: position = -95 score = 4.52797 sequence = GTTTGTTCCATCTCAAAT Gene: Atu4382: Copper-containing nitrite reductase (EC 1.7.2.1)	*2 Mesorhizobium sp. BNC1 Site: position = -234 score = 4.15318 sequence = CTTTGCGCGACGGGAACT Site: position = -86 score = 5.51718 sequence = GTTTGCGCCAGCGCAAAG Gene: Meso_4273: Copper-containing nitrite reductase (EC 1.7.2.1) Site: position = -175 score = 4.9493 sequence = CTTTGATCCAGCGCAACG Site: position = -82 score = 5.12865 sequence = ATTTGCGCCAGAGCAAAG Gene: Meso_2243: Copper-containing nitrite reductase (EC 1.7.2.1)	Mesorhizobium loti MAFF303099	* Brucella melitensis 16M Site: position = -187 score = 4.84206 sequence = CTTTGTCTTAACGCAAAC Site: position = -28 score = 4.66887 sequence = CTTGGTCCTATCGCAAAG Gene: BMEII0988: Copper-containing nitrite reductase (EC 1.7.2.1)	Bartonella quintana str. Toulouse	*2 Rhodopseudomonas palustris CGA009 Gene: RPA3306: Copper-containing nitrite reductase (EC 1.7.2.1) Site: position = -190 score = 4.45254 sequence = CTTTGTCGCGCAACAACG Site: position = -84 score = 4.57165 sequence = GCTTGTGCTGGGACAAAC Gene: RPA4145: Copper-containing nitrite reductase (EC 1.7.2.1)	* Bradyrhizobium japonicum USDA 110 Site: position = -76 score = 4.43953 sequence = GCTTGTTGCAGCGCAAAC Gene: blr7089: Copper-containing nitrite reductase (EC 1.7.2.1)	* Bradyrhizobium sp. BTAi1 Site: position = -83 score = 4.31741 sequence = GCTTGTTGCAGCACAAAC Gene: BBta_6826: Copper-containing nitrite reductase (EC 1.7.2.1)	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Copper-containing nitrite reductase (EC 1.7.2.1)
nirV	2 Sinorhizobium meliloti 1021 Gene: SMa2159: Nitrite reductase accessory protein NirV Gene: SMa1247: Nitrite reductase accessory protein NirV	Rhizobium sp. NGR234 Gene: NGR_c09960: Nitrite reductase accessory protein NirV	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00526: Nitrite reductase accessory protein NirV	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4381: Nitrite reductase accessory protein NirV	2 Mesorhizobium sp. BNC1 Gene: Meso_4272: Nitrite reductase accessory protein NirV Gene: Meso_0576: Nitrite reductase accessory protein NirV	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0987: Nitrite reductase accessory protein NirV	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009 Gene: RPA4146: Nitrite reductase accessory protein NirV	Bradyrhizobium japonicum USDA 110 Gene: blr7090: Nitrite reductase accessory protein NirV	Bradyrhizobium sp. BTAi1 Gene: BBta_6827: Nitrite reductase accessory protein NirV	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitrite reductase accessory protein NirV
nnrR	Sinorhizobium meliloti 1021 Gene: SMa1245: Nitric oxide-responding transcriptional regulator NnrR, Crp family	Rhizobium sp. NGR234 Gene: NGR_c09970: Nitric oxide-responding transcriptional regulator NnrR, Crp family	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00527: Nitric oxide-responding transcriptional regulator NnrR, Crp family	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4380: Nitric oxide-responding transcriptional regulator NnrR, Crp family	*2 Mesorhizobium sp. BNC1 Site: position = -143 score = 4.91392 sequence = CTTTGCTGCAACGCAAAC Gene: Meso_4277: Nitric oxide-responding transcriptional regulator NnrR, Crp family Site: position = -55 score = 5.20417 sequence = ATTTGCGCTCGCGCAAAG Gene: Meso_2246: Nitric oxide-responding transcriptional regulator NnrR, Crp family	Mesorhizobium loti MAFF303099	Brucella melitensis 16M Gene: BMEII0986: Nitric oxide-responding transcriptional regulator NnrR, Crp family	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -229 score = 4.32131 sequence = ATTTGCGGTTCGGGAAAG Gene: RPA4143: Nitric oxide-responding transcriptional regulator NnrR, Crp family	* Bradyrhizobium japonicum USDA 110 Site: position = -68 score = 4.95864 sequence = TTTTGCGCTATCGCAAAC Gene: blr7084: Nitric oxide-responding transcriptional regulator NnrR, Crp family	* Bradyrhizobium sp. BTAi1 Site: position = -86 score = 4.87784 sequence = GGTTGTGCCAGCACAAAC Gene: BBta_6822: Nitric oxide-responding transcriptional regulator NnrR, Crp family	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Nitric oxide-responding transcriptional regulator NnrR, Crp family
nnrU	Sinorhizobium meliloti 1021 Gene: SMa1283: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)	Rhizobium sp. NGR234 Gene: NGR_c09820: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42 Gene: RHE_PF00528: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -247 score = 5.04471 sequence = CTTTGCGGTCGGTCAAAG Gene: Atu4392: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -108 score = 4.12528 sequence = GGTTGACGCACGACAACG Gene: RPA1485: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)
bsr7087	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	* Bradyrhizobium japonicum USDA 110 Site: position = -117 score = 5.02105 sequence = CCTTGCGCTCGCGCAAAG Site: position = -79 score = 5.052 sequence = CATTGCGCTCGCGCAAAG Gene: bsr7087: bsr7087; unknown protein	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	bsr7087; unknown protein
PF04314	Sinorhizobium meliloti 1021	Rhizobium sp. NGR234	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110 Gene: blr7088: Copper metallochaperone, bacterial analog of Cox17 protein	Bradyrhizobium sp. BTAi1 Gene: BBta_4537: Copper metallochaperone, bacterial analog of Cox17 protein	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Copper metallochaperone, bacterial analog of Cox17 protein
azu1	* Sinorhizobium meliloti 1021 Site: position = -91 score = 4.18083 sequence = ATTTGACAAGCATCAAAG Gene: SMa1243: Pseudoazurin precursor	* Rhizobium sp. NGR234 Site: position = -91 score = 4.3553 sequence = GTTTGACAGACATCAAAG Gene: NGR_c09980: Pseudoazurin precursor	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	Rhodopseudomonas palustris CGA009	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Pseudoazurin precursor
NGR_c09830	Sinorhizobium meliloti 1021	* Rhizobium sp. NGR234 Site: position = -63 score = 5.13321 sequence = CTTTGCGCTTGATCAAAG Gene: NGR_c09830: bsl3211; hypothetical protein	Rhizobium leguminosarum bv. viciae 3841	Rhizobium etli CFN 42	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -67 score = 5.04471 sequence = CTTTGCGGTCGGTCAAAG Gene: Atu8040: bsl3211; hypothetical protein	Mesorhizobium sp. BNC1	Mesorhizobium loti MAFF303099	Brucella melitensis 16M	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -106 score = 4.6981 sequence = CGTTGTGCCGCGACAAAC Site: position = -69 score = 4.37002 sequence = GCTTGCGCCCCGACAAAC Gene: RPA1452: bsl3211; hypothetical protein	* Bradyrhizobium japonicum USDA 110 Site: position = -20 score = 4.48205 sequence = GTTTGTCGGCGGACAAAC Site: position = 17 score = 4.95985 sequence = GTTTGCGCCGACGCAACG Gene: bsl3211: bsl3211; hypothetical protein	* Bradyrhizobium sp. BTAi1 Site: position = -67 score = 4.84148 sequence = CTTTGTCGCCGCACAAAC Gene: BBta_2085: bsl3211; hypothetical protein	Nitrobacter winogradskyi Nb-255	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	bsl3211; hypothetical protein

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