Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NnrR in Bradyrhizobium japonicum USDA 110

Properties
Regulator type: Transcription factor
TF locus tag: blr7084
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Regulog: NnrR - Rhizobiales
Statistics of regulated genes:
- Genes 23
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 110 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -91
Score: 5
Sequence: ATTTGCGCTGCGACAAAG
Locus tag: bll6222
Name: PF01152
Funciton: Truncated hemoglobin
PF01152
Truncated hemoglobin

Position: -20
Score: 4.5
Sequence: GTTTGTCGGCGGACAAAC
Position: 17
Score: 5
Sequence: GTTTGCGCCGACGCAACG
Locus tag: bsl3211
Name: null
Funciton: bsl3211; hypothetical protein
bsl3211; hypothetical protein

Position: -117
Score: 5
Sequence: CCTTGCGCTCGCGCAAAG
Position: -79
Score: 5.1
Sequence: CATTGCGCTCGCGCAAAG
Position: -76
Score: 4.4
Sequence: GCTTGTTGCAGCGCAAAC
Locus tag: bsr7087
Name: null
Funciton: bsr7087; unknown protein
Locus tag: blr7088
Name: PF04314
Funciton: Copper metallochaperone, bacterial analog of Cox17 protein
Locus tag: blr7089
Name: nirK
Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: blr7090
Name: nirV
Funciton: Nitrite reductase accessory protein NirV
bsr7087; unknown protein
PF04314
Copper metallochaperone, bacterial analog of Cox17 protein
nirK
Copper-containing nitrite reductase (EC 1.7.2.1)
nirV
Nitrite reductase accessory protein NirV

Position: -79
Score: 5
Sequence: GTTTGCGATAGCGCAAAA
Locus tag: bll7083
Name: nnrS
Funciton: NnrS protein involved in response to NO
nnrS
NnrS protein involved in response to NO

Position: -108
Score: 5
Sequence: CGTTGCGTCGGCGCAAAC
Position: -71
Score: 4.5
Sequence: GTTTGTCCGCCGACAAAC
Locus tag: blr3212
Name: norE
Funciton: Nitric oxide reductase activation protein NorE
Locus tag: bsr3213
Name: norF
Funciton: Nitric oxide reductase activation protein NorF
norE
Nitric oxide reductase activation protein NorE
norF
Nitric oxide reductase activation protein NorF

Position: -50
Score: 4.2
Sequence: CATTGTTCCCGCTCAAAT
Locus tag: bll7628
Name: nnrX
Funciton: Putative lipid carrier protein
Locus tag: bll7627
Name: PF01136
Funciton: Putative protease
Locus tag: bll7626
Name: PF01136
Funciton: Putative protease
nnrX
Putative lipid carrier protein
PF01136
Putative protease
PF01136
Putative protease

Position: -15
Score: 4.2
Sequence: ATTTGAGCGGGAACAATG
Locus tag: blr7629
Name: ubiD
Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: blr7630
Name: ubiX
Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
ubiD
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
ubiX
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)

Position: -68
Score: 5
Sequence: TTTTGCGCTATCGCAAAC
Locus tag: blr7084
Name: nnrR
Funciton: Nitric oxide-responding transcriptional regulator NnrR, Crp family
nnrR
Nitric oxide-responding transcriptional regulator NnrR, Crp family

Position: -133
Score: 4.5
Sequence: GCTTGATCCAGCGCAAAC
Locus tag: blr0314
Name: nosR
Funciton: Nitrous oxide reductase maturation protein
nosR
Nitrous oxide reductase maturation protein

Position: -142
Score: 5.1
Sequence: CTTTGCGCGAGCGCAATG
Position: -104
Score: 5
Sequence: CTTTGCGCGAGCGCAAGG
Locus tag: bll7086
Name: hemN
Funciton: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
hemN
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)

Position: -64
Score: 4.4
Sequence: GCTTGCGCTCCAACAAAG
Locus tag: bsl7085
Name: PF08984
Funciton: nitric oxide reductase subunit C, cytochrome c
PF08984
nitric oxide reductase subunit C, cytochrome c

Position: -74
Score: 4.8
Sequence: GTTTGACATAACGCAAAG
Locus tag: bll2007
Name: hemN1
Funciton: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
hemN1
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)

Position: -89
Score: 4.6
Sequence: CATTGCGCCCTGACAAAG
Locus tag: blr3214
Name: norC
Funciton: Nitric-oxide reductase subunit C (EC 1.7.99.7)
Locus tag: blr3215
Name: norB
Funciton: Nitric-oxide reductase subunit B (EC 1.7.99.7)
Locus tag: blr3216
Name: norQ
Funciton: Nitric oxide reductase activation protein NorQ
Locus tag: blr3217
Name: norD
Funciton: Nitric oxide reductase activation protein NorD
norC
Nitric-oxide reductase subunit C (EC 1.7.99.7)
norB
Nitric-oxide reductase subunit B (EC 1.7.99.7)
norQ
Nitric oxide reductase activation protein NorQ
norD
Nitric oxide reductase activation protein NorD
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