Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator NnrR in Rhizobiales

Properties
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Regulog: NnrR - Rhizobiales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Sinorhizobium meliloti 1021
SMa1261 PF00034 -84 4.7 GTTTGCTCCCCGTCAAAG
SMa1250 nirK -191 4.7 CTTTGACAATTGGCAAAG
SMa1250 nirK -90 4.8 GTTTGTTCCACCTCAAAG
SMa1243 azu1 -91 4.2 ATTTGACAAGCATCAAAG
SMa1252 nnrS -173 4.8 CTTTGAGGTGGAACAAAC
SMa1252 nnrS -72 4.7 CTTTGCCAATTGTCAAAG
SMa1279 norE -57 4.9 CTTTGATCGAGAGCAAAG
SMa1289 nnrX -88 5.1 CTTTGCTCCAGCGCAAAT
SMa1288 ubiD -107 5.1 ATTTGCGCTGGAGCAAAG
SMa1178 PF02915 -107 4.7 CTTTGCGCCAGATCAACT
SMa1179 nosR -82 4.7 AGTTGATCTGGCGCAAAG
SMa1195 dnrN -141 5.4 GTTTGCGCAAGCGCAAAG
SMa1266 hemN -85 5.1 CTTTGACATTGCGCAAAG
SMa1276 norC -145 4.9 GTTTGCCGAAACGCAAAG
Rhizobium sp. NGR234
NGR_c09900 PF00034 -169 4.2 CTTTGACCAATATCAAGG
NGR_c09900 PF00034 -123 4.7 GTTTGCTCGGCGTCAAAG
NGR_c09950 nirK -195 4.7 CTTTGACAATTGGCAAAG
NGR_c09950 nirK -91 4.7 ATTTGTTCCACCTCAAAG
NGR_c09980 azu1 -91 4.4 GTTTGACAGACATCAAAG
NGR_c09830 null -63 5.1 CTTTGCGCTTGATCAAAG
NGR_c09940 nnrS -177 4.7 CTTTGAGGTGGAACAAAT
NGR_c09940 nnrS -73 4.7 CTTTGCCAATTGTCAAAG
NGR_c09840 norE -69 5.1 CTTTGATCAAGCGCAAAG
NGR_c09800 nnrX -80 5.1 CTTTGCGCTGGCTCAAAT
NGR_c09810 ubiD -50 5.1 ATTTGAGCCAGCGCAAAG
NGR_c09890 hemN -129 4.7 CTTTGACGCCGAGCAAAC
NGR_c09890 hemN -83 4.2 CCTTGATATTGGTCAAAG
NGR_c09850 norC -142 4.5 GTTTGCAGAAACGCAAAG
Rhizobium etli CFN 42
RHE_PF00520 PF00034 -114 4.3 ATTTGTCCGCTGTCAAAG
RHE_PF00525 nirK -148 4.7 CGTTGAGATTACGCAAAG
RHE_PF00525 nirK -117 5.2 CTTTGTGCCGGCACAAAC
RHE_PF00525 nirK -94 5.1 GTTTGCGCCACGTCAAAG
RHE_PF00524 nnrS -125 5.1 CTTTGACGTGGCGCAAAC
RHE_PF00524 nnrS -102 5.2 GTTTGTGCCGGCACAAAG
RHE_PF00524 nnrS -71 4.7 CTTTGCGTAATCTCAACG
RHE_PF00514 norE -60 5 CTTTGCGATCGGTCAAAG
RHE_PF00515 norC -112 4.7 CTTTGCGAATTAACAAAG
Agrobacterium tumefaciens str. C58 (Cereon)
Atu4382 nirK -181 4.8 CTTTGCGAACAGGCAAAG
Atu4382 nirK -95 4.5 GTTTGTTCCATCTCAAAT
Atu8040 null -67 5 CTTTGCGGTCGGTCAAAG
Atu4392 nnrU -247 5 CTTTGCGGTCGGTCAAAG
Atu4383 nnrS -159 4.5 ATTTGAGATGGAACAAAC
Atu4383 nnrS -73 4.8 CTTTGCCTGTTCGCAAAG
Atu4391 norE -76 5 CTTTGACCGACCGCAAAG
Atu4396 nnrX -75 4.9 CTTTGCGTTCGCTCAAAC
Atu4394 ubiD -20 4.7 ATTTGCGGCAGCGCAAGG
Atu4389 norC -138 4.9 GTTTGCCAAATGGCAAAG
Mesorhizobium sp. BNC1
Meso_4284 null -142 5.6 CTTTGCGCTAGCGCAAAC
Meso_4273 nirK -234 4.2 CTTTGCGCGACGGGAACT
Meso_4273 nirK -86 5.5 GTTTGCGCCAGCGCAAAG
Meso_2243 nirK -175 4.9 CTTTGATCCAGCGCAACG
Meso_2243 nirK -82 5.1 ATTTGCGCCAGAGCAAAG
Meso_2245 azu1 -81 5.2 CTTTGCGCGAGCGCAAAT
Meso_4276 azu1 -86 4.9 GTTTGCGTTGCAGCAAAG
Meso_4290 null -229 5.4 GTTTGCGCTGGCGCAAAC
Meso_4294 null -70 4.8 CTTTGCGGAAGTGCAAAG
Meso_4293 ubiD -65 4.8 CTTTGCACTTCCGCAAAG
Meso_4277 nnrR -143 4.9 CTTTGCTGCAACGCAAAC
Meso_2246 nnrR -55 5.2 ATTTGCGCTCGCGCAAAG
Meso_4289 nnrS2 -83 5.4 GTTTGCGCCAGCGCAAAC
Meso_2247 PF08984 -74 5.1 CTTTGCGCAAGCACAACG
Brucella melitensis 16M
BMEII0988 nirK -187 4.8 CTTTGTCTTAACGCAAAC
BMEII0988 nirK -28 4.7 CTTGGTCCTATCGCAAAG
BMEII0965 null -120 4.1 GTTTGATTTTAATCAAAG
BMEII1001 norE -51 5 CTTTGCCAAAACGCAAAG
BMEII0975 nosR -233 3.9 CTTTGCGTCATATCAATA
BMEII0999 norC -144 4.9 CTTTGCCTATTCGCAAAG
Rhodopseudomonas palustris CGA009
RPA1455 norC -101 5 CGTTGAGCCAGCACAAAG
RPA1452 null -106 4.7 CGTTGTGCCGCGACAAAC
RPA1452 null -69 4.4 GCTTGCGCCCCGACAAAC
RPA1485 nnrU -108 4.1 GGTTGACGCACGACAACG
RPA4145 nirK -190 4.5 CTTTGTCGCGCAACAACG
RPA4145 nirK -84 4.6 GCTTGTGCTGGGACAAAC
RPA1486 nnrS -89 5 GTTTGCGCTGGCACAACC
RPA1453 norE -86 4.4 GTTTGTCGGGGCGCAAGC
RPA1453 norE -49 4.7 GTTTGTCGCGGCACAACG
RPA0932 nnrX -67 5.1 CTTTGATCAGGCGCAAAG
RPA0931 ubiD -66 5.1 CTTTGCGCCTGATCAAAG
RPA4143 nnrR -229 4.3 ATTTGCGGTTCGGGAAAG
RPA2059 PF02915 -57 5 ATTTGCGCCAGCGCAAAT
RPA2060 nosR -128 5 ATTTGCGCTGGCGCAAAT
Bradyrhizobium japonicum USDA 110
bll6222 PF01152 -91 5 ATTTGCGCTGCGACAAAG
bsr7087 null -117 5 CCTTGCGCTCGCGCAAAG
bsr7087 null -79 5.1 CATTGCGCTCGCGCAAAG
blr7089 nirK -76 4.4 GCTTGTTGCAGCGCAAAC
bsl3211 null -20 4.5 GTTTGTCGGCGGACAAAC
bsl3211 null 17 5 GTTTGCGCCGACGCAACG
bll7083 nnrS -79 5 GTTTGCGATAGCGCAAAA
blr3212 norE -108 5 CGTTGCGTCGGCGCAAAC
blr3212 norE -71 4.5 GTTTGTCCGCCGACAAAC
bll7628 nnrX -50 4.2 CATTGTTCCCGCTCAAAT
blr7629 ubiD -15 4.2 ATTTGAGCGGGAACAATG
blr7084 nnrR -68 5 TTTTGCGCTATCGCAAAC
blr0314 nosR -133 4.5 GCTTGATCCAGCGCAAAC
bll7086 hemN -142 5.1 CTTTGCGCGAGCGCAATG
bll7086 hemN -104 5 CTTTGCGCGAGCGCAAGG
bsl7085 PF08984 -64 4.4 GCTTGCGCTCCAACAAAG
bll2007 hemN1 -74 4.8 GTTTGACATAACGCAAAG
blr3214 norC -89 4.6 CATTGCGCCCTGACAAAG
Bradyrhizobium sp. BTAi1
BBta_2085 null -67 4.8 CTTTGTCGCCGCACAAAC
BBta_6826 nirK -83 4.3 GCTTGTTGCAGCACAAAC
BBta_6821 nnrS -100 4.9 GTTTGTGCTGGCACAACC
BBta_2086 norE -68 4.8 GTTTGTGCGGCGACAAAG
BBta_6822 nnrR -86 4.9 GGTTGTGCCAGCACAAAC
BBta_6006 PF02915 -103 4.8 CGTTGCGCTGGATCAAAC
BBta_6007 nosR -181 4.8 GTTTGATCCAGCGCAACG
BBta_6824 hemN -160 5.2 CTTTGAGGAAGCGCAAAG
BBta_6824 hemN -87 4.6 CTTTGAGCAGGCTCAAGG
BBta_6823 PF08984 -101 4.7 GGTTGTGCCGCGACAAAG
BBta_2088 norC -85 4.8 CGTTGCGCCCCGACAAAG
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