Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NnrR in Sinorhizobium meliloti 1021

Properties
Regulator type: Transcription factor
TF locus tag: SMa1245
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Regulog: NnrR - Rhizobiales
Statistics of regulated genes:
- Genes 32
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 110 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -84
Score: 4.7
Sequence: GTTTGCTCCCCGTCAAAG
Locus tag: SMa1261
Name: PF00034
Funciton: hypothetical protein
Locus tag: SMa1259
Name: null
Funciton: hypothetical protein
Locus tag: SMa1256
Name: PF10006
Funciton: putative universal stress protein
Locus tag: SMa1255
Name: PF01883
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
SMa1261
PF00034
hypothetical protein
SMa1259
hypothetical protein
SMa1256
PF10006
putative universal stress protein
SMa1255
PF01883
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Position: -91
Score: 4.2
Sequence: ATTTGACAAGCATCAAAG
Locus tag: SMa1245
Name: nnrR
Funciton: Nitric oxide-responding transcriptional regulator NnrR, Crp family
Locus tag: SMa1243
Name: azu1
Funciton: Pseudoazurin precursor
SMa1245
nnrR
Nitric oxide-responding transcriptional regulator NnrR, Crp family
SMa1243
azu1
Pseudoazurin precursor
Position: -191
Score: 4.7
Sequence: CTTTGACAATTGGCAAAG
Position: -90
Score: 4.8
Sequence: GTTTGTTCCACCTCAAAG
Locus tag: SMa1250
Name: nirK
Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: SMa1247
Name: nirV
Funciton: Nitrite reductase accessory protein NirV
SMa1250
nirK
Copper-containing nitrite reductase (EC 1.7.2.1)
SMa1247
nirV
Nitrite reductase accessory protein NirV
Position: -173
Score: 4.8
Sequence: CTTTGAGGTGGAACAAAC
Position: -72
Score: 4.7
Sequence: CTTTGCCAATTGTCAAAG
Locus tag: SMa1252
Name: nnrS
Funciton: NnrS protein involved in response to NO
SMa1252
nnrS
NnrS protein involved in response to NO
Position: -57
Score: 4.9
Sequence: CTTTGATCGAGAGCAAAG
Locus tag: SMa1279
Name: norE
Funciton: Nitric oxide reductase activation protein NorE
SMa1279
norE
Nitric oxide reductase activation protein NorE
Position: -88
Score: 5.1
Sequence: CTTTGCTCCAGCGCAAAT
Locus tag: SMa1289
Name: nnrX
Funciton: Putative lipid carrier protein
Locus tag: SMa1291
Name: PF01136
Funciton: Putative protease
Locus tag: SMa1292
Name: PF01136
Funciton: Putative protease
Locus tag: SMa1294
Name: null
Funciton: hypothetical protein
SMa1289
nnrX
Putative lipid carrier protein
SMa1291
PF01136
Putative protease
SMa1292
PF01136
Putative protease
SMa1294
hypothetical protein
Position: -107
Score: 5.1
Sequence: ATTTGCGCTGGAGCAAAG
Locus tag: SMa1288
Name: ubiD
Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Locus tag: SMa1285
Name: ubiX
Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
SMa1288
ubiD
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
SMa1285
ubiX
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
Position: -107
Score: 4.7
Sequence: CTTTGCGCCAGATCAACT
Locus tag: SMa1178
Name: PF02915
Funciton: Rubrerythrin
SMa1178
PF02915
Rubrerythrin
Position: -82
Score: 4.7
Sequence: AGTTGATCTGGCGCAAAG
Locus tag: SMa1179
Name: nosR
Funciton: Nitrous oxide reductase maturation protein
Locus tag: SMa1182
Name: nosZ
Funciton: Nitrous-oxide reductase (EC 1.7.99.6)
Locus tag: SMa1183
Name: nosD
Funciton: Nitrous oxide reductase maturation protein NosD
Locus tag: SMa1184
Name: nosF
Funciton: Nitrous oxide reductase maturation protein NosF (ATPase)
Locus tag: SMa1185
Name: nosY
Funciton: Nitrous oxide reductase maturation transmembrane protein NosY
Locus tag: SMa1186
Name: nosL
Funciton: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL
Locus tag: SMa1188
Name: nosX
Funciton: Nitrous oxide reductase maturation periplasmic protein NosX
Locus tag: SMa1191
Name: hmp
Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
SMa1179
nosR
Nitrous oxide reductase maturation protein
SMa1182
nosZ
Nitrous-oxide reductase (EC 1.7.99.6)
SMa1183
nosD
Nitrous oxide reductase maturation protein NosD
SMa1184
nosF
Nitrous oxide reductase maturation protein NosF (ATPase)
SMa1185
nosY
Nitrous oxide reductase maturation transmembrane protein NosY
SMa1186
nosL
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL
SMa1188
nosX
Nitrous oxide reductase maturation periplasmic protein NosX
SMa1191
hmp
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Position: -141
Score: 5.4
Sequence: GTTTGCGCAAGCGCAAAG
Locus tag: SMa1195
Name: dnrN
Funciton: Nitric oxide-dependent regulator DnrN or NorA
Locus tag: SMa1194
Name: nnrS2
Funciton: NnrS protein involved in response to NO
SMa1195
dnrN
Nitric oxide-dependent regulator DnrN or NorA
SMa1194
nnrS2
NnrS protein involved in response to NO
Position: -85
Score: 5.1
Sequence: CTTTGACATTGCGCAAAG
Locus tag: SMa1266
Name: hemN
Funciton: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
SMa1266
hemN
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
Position: -145
Score: 4.9
Sequence: GTTTGCCGAAACGCAAAG
Locus tag: SMa1276
Name: norC
Funciton: Nitric-oxide reductase subunit C (EC 1.7.99.7)
Locus tag: SMa1273
Name: norB
Funciton: Nitric-oxide reductase subunit B (EC 1.7.99.7)
Locus tag: SMa1272
Name: norQ
Funciton: Nitric oxide reductase activation protein NorQ
Locus tag: SMa1269
Name: norD
Funciton: Nitric oxide reductase activation protein NorD
SMa1276
norC
Nitric-oxide reductase subunit C (EC 1.7.99.7)
SMa1273
norB
Nitric-oxide reductase subunit B (EC 1.7.99.7)
SMa1272
norQ
Nitric oxide reductase activation protein NorQ
SMa1269
norD
Nitric oxide reductase activation protein NorD
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