Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NnrR in Rhizobium sp. NGR234

Properties
Regulator type: Transcription factor
TF locus tag: NGR_c09970
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Regulog: NnrR - Rhizobiales
Statistics of regulated genes:
- Genes 22
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 110 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -169
Score: 4.2
Sequence: CTTTGACCAATATCAAGG
Position: -123
Score: 4.7
Sequence: GTTTGCTCGGCGTCAAAG
Locus tag: NGR_c09900
Name: PF00034
Funciton: hypothetical protein
Locus tag: NGR_c09910
Name: null
Funciton: hypothetical protein
Locus tag: NGR_c09920
Name: PF10006
Funciton: putative universal stress protein
Locus tag: NGR_c09930
Name: PF01883
Funciton: PaaD-like protein (DUF59) involved in Fe-S cluster assembly
NGR_c09900
PF00034
hypothetical protein
NGR_c09910
hypothetical protein
NGR_c09920
PF10006
putative universal stress protein
NGR_c09930
PF01883
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
Position: -195
Score: 4.7
Sequence: CTTTGACAATTGGCAAAG
Position: -91
Score: 4.7
Sequence: ATTTGTTCCACCTCAAAG
Position: -91
Score: 4.4
Sequence: GTTTGACAGACATCAAAG
Locus tag: NGR_c09950
Name: nirK
Funciton: Copper-containing nitrite reductase (EC 1.7.2.1)
Locus tag: NGR_c09960
Name: nirV
Funciton: Nitrite reductase accessory protein NirV
Locus tag: NGR_c09970
Name: nnrR
Funciton: Nitric oxide-responding transcriptional regulator NnrR, Crp family
Locus tag: NGR_c09980
Name: azu1
Funciton: Pseudoazurin precursor
NGR_c09950
nirK
Copper-containing nitrite reductase (EC 1.7.2.1)
NGR_c09960
nirV
Nitrite reductase accessory protein NirV
NGR_c09970
nnrR
Nitric oxide-responding transcriptional regulator NnrR, Crp family
NGR_c09980
azu1
Pseudoazurin precursor
Position: -63
Score: 5.1
Sequence: CTTTGCGCTTGATCAAAG
Locus tag: NGR_c09830
Name: null
Funciton: bsl3211; hypothetical protein
Locus tag: NGR_c09820
Name: nnrU
Funciton: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)
NGR_c09830
bsl3211; hypothetical protein
NGR_c09820
nnrU
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)
Position: -177
Score: 4.7
Sequence: CTTTGAGGTGGAACAAAT
Position: -73
Score: 4.7
Sequence: CTTTGCCAATTGTCAAAG
Locus tag: NGR_c09940
Name: nnrS
Funciton: NnrS protein involved in response to NO
NGR_c09940
nnrS
NnrS protein involved in response to NO
Position: -69
Score: 5.1
Sequence: CTTTGATCAAGCGCAAAG
Locus tag: NGR_c09840
Name: norE
Funciton: Nitric oxide reductase activation protein NorE
NGR_c09840
norE
Nitric oxide reductase activation protein NorE
Position: -80
Score: 5.1
Sequence: CTTTGCGCTGGCTCAAAT
Locus tag: NGR_c09800
Name: nnrX
Funciton: Putative lipid carrier protein
Locus tag: NGR_c09790
Name: PF01136
Funciton: Putative protease
Locus tag: NGR_c09780
Name: PF01136
Funciton: Putative protease
Locus tag: NGR_c09770
Name: null
Funciton: hypothetical protein
NGR_c09800
nnrX
Putative lipid carrier protein
NGR_c09790
PF01136
Putative protease
NGR_c09780
PF01136
Putative protease
NGR_c09770
hypothetical protein
Position: -50
Score: 5.1
Sequence: ATTTGAGCCAGCGCAAAG
Locus tag: NGR_c09810
Name: ubiD
Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
NGR_c09810
ubiD
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
Position: -129
Score: 4.7
Sequence: CTTTGACGCCGAGCAAAC
Position: -83
Score: 4.2
Sequence: CCTTGATATTGGTCAAAG
Locus tag: NGR_c09890
Name: hemN
Funciton: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
NGR_c09890
hemN
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
Position: -142
Score: 4.5
Sequence: GTTTGCAGAAACGCAAAG
Locus tag: NGR_c09850
Name: norC
Funciton: Nitric-oxide reductase subunit C (EC 1.7.99.7)
Locus tag: NGR_c09860
Name: norB
Funciton: Nitric-oxide reductase subunit B (EC 1.7.99.7)
Locus tag: NGR_c09870
Name: norQ
Funciton: Nitric oxide reductase activation protein NorQ
Locus tag: NGR_c09880
Name: norD
Funciton: Nitric oxide reductase activation protein NorD
NGR_c09850
norC
Nitric-oxide reductase subunit C (EC 1.7.99.7)
NGR_c09860
norB
Nitric-oxide reductase subunit B (EC 1.7.99.7)
NGR_c09870
norQ
Nitric oxide reductase activation protein NorQ
NGR_c09880
norD
Nitric oxide reductase activation protein NorD
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