Regulon of NnrR in Rhodopseudomonas palustris CGA009

Properties
Regulator type:	Transcription factor
TF locus tag:	RPA4143
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Denitrification
Effector:	Nitric oxide
Regulog:	NnrR - Rhizobiales
Statistics of regulated genes:
- Genes	25
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 110 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By trascription factor - NnrR
By TF family - CRP
By effector - Nitric oxide
By pathway - Denitrification

Regulated operons
	Locus Tag	Name	Function
Position: -190 Score: 4.5 Sequence: CTTTGTCGCGCAACAACG Position: -84 Score: 4.6 Sequence: GCTTGTGCTGGGACAAAC Locus tag: RPA4145 Name: nirK Funciton: Copper-containing nitrite reductase (EC 1.7.2.1) Locus tag: RPA4146 Name: nirV Funciton: Nitrite reductase accessory protein NirV
	RPA4145	nirK	Copper-containing nitrite reductase (EC 1.7.2.1)
	RPA4146	nirV	Nitrite reductase accessory protein NirV
Position: -108 Score: 4.1 Sequence: GGTTGACGCACGACAACG Locus tag: RPA1485 Name: nnrU Funciton: NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)
	RPA1485	nnrU	NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor)
Position: -106 Score: 4.7 Sequence: CGTTGTGCCGCGACAAAC Position: -69 Score: 4.4 Sequence: GCTTGCGCCCCGACAAAC Locus tag: RPA1452 Name: null Funciton: bsl3211; hypothetical protein
	RPA1452		bsl3211; hypothetical protein
Position: -89 Score: 5 Sequence: GTTTGCGCTGGCACAACC Locus tag: RPA1486 Name: nnrS Funciton: NnrS protein involved in response to NO
	RPA1486	nnrS	NnrS protein involved in response to NO
Position: -86 Score: 4.4 Sequence: GTTTGTCGGGGCGCAAGC Position: -49 Score: 4.7 Sequence: GTTTGTCGCGGCACAACG Locus tag: RPA1453 Name: norE Funciton: Nitric oxide reductase activation protein NorE Locus tag: RPA1454 Name: norF Funciton: Nitric oxide reductase activation protein NorF
	RPA1453	norE	Nitric oxide reductase activation protein NorE
	RPA1454	norF	Nitric oxide reductase activation protein NorF
Position: -67 Score: 5.1 Sequence: CTTTGATCAGGCGCAAAG Locus tag: RPA0932 Name: nnrX Funciton: Putative lipid carrier protein Locus tag: RPA0933 Name: PF01136 Funciton: Putative protease Locus tag: RPA0934 Name: PF01136 Funciton: Putative protease
	RPA0932	nnrX	Putative lipid carrier protein
	RPA0933	PF01136	Putative protease
	RPA0934	PF01136	Putative protease
Position: -66 Score: 5.1 Sequence: CTTTGCGCCTGATCAAAG Locus tag: RPA0931 Name: ubiD Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) Locus tag: RPA0930 Name: ubiX Funciton: 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
	RPA0931	ubiD	3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)
	RPA0930	ubiX	3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)
Position: -229 Score: 4.3 Sequence: ATTTGCGGTTCGGGAAAG Locus tag: RPA4143 Name: nnrR Funciton: Nitric oxide-responding transcriptional regulator NnrR, Crp family
	RPA4143	nnrR	Nitric oxide-responding transcriptional regulator NnrR, Crp family
Position: -57 Score: 5 Sequence: ATTTGCGCCAGCGCAAAT Locus tag: RPA2059 Name: PF02915 Funciton: Rubrerythrin
	RPA2059	PF02915	Rubrerythrin
Position: -128 Score: 5 Sequence: ATTTGCGCTGGCGCAAAT Locus tag: RPA2060 Name: nosR Funciton: Nitrous oxide reductase maturation protein Locus tag: RPA2061 Name: nosZ Funciton: Nitrous-oxide reductase (EC 1.7.99.6) Locus tag: RPA2062 Name: nosD Funciton: Nitrous oxide reductase maturation protein NosD Locus tag: RPA2063 Name: nosF Funciton: Nitrous oxide reductase maturation protein NosF (ATPase) Locus tag: RPA2064 Name: nosY Funciton: Nitrous oxide reductase maturation transmembrane protein NosY Locus tag: RPA2065 Name: nosL Funciton: Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL Locus tag: RPA2066 Name: nosX Funciton: Nitrous oxide reductase maturation periplasmic protein NosX
	RPA2060	nosR	Nitrous oxide reductase maturation protein
	RPA2061	nosZ	Nitrous-oxide reductase (EC 1.7.99.6)
	RPA2062	nosD	Nitrous oxide reductase maturation protein NosD
	RPA2063	nosF	Nitrous oxide reductase maturation protein NosF (ATPase)
	RPA2064	nosY	Nitrous oxide reductase maturation transmembrane protein NosY
	RPA2065	nosL	Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL
	RPA2066	nosX	Nitrous oxide reductase maturation periplasmic protein NosX
Position: -101 Score: 5 Sequence: CGTTGAGCCAGCACAAAG Locus tag: RPA1455 Name: norC Funciton: Nitric-oxide reductase subunit C (EC 1.7.99.7) Locus tag: RPA1456 Name: norB Funciton: Nitric-oxide reductase subunit B (EC 1.7.99.7) Locus tag: RPA1457 Name: norQ Funciton: Nitric oxide reductase activation protein NorQ Locus tag: RPA1458 Name: norD Funciton: Nitric oxide reductase activation protein NorD
	RPA1455	norC	Nitric-oxide reductase subunit C (EC 1.7.99.7)
	RPA1456	norB	Nitric-oxide reductase subunit B (EC 1.7.99.7)
	RPA1457	norQ	Nitric oxide reductase activation protein NorQ
	RPA1458	norD	Nitric oxide reductase activation protein NorD

Export
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NnrR in Rhodopseudomonas palustris CGA009

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --