Regulog NtrC - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Statistics of regulated genes
Genome	Genes	Operons
Escherichia coli str. K-12 substr. MG1655	39	12
Salmonella typhimurium LT2	21	7
Citrobacter koseri ATCC BAA-895	27	10
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	38	11
Enterobacter sp. 638	33	11
Erwinia amylovora ATCC 49946	24	8
Yersinia pestis KIM	22	7
Serratia proteamaculans 568	35	9
Erwinia carotovora subsp. atroseptica SCRI1043	11	6
Edwardsiella tarda EIB202	9	4
Proteus mirabilis HI4320	5	3
Photorhabdus luminescens subsp. laumondii TTO1	9	4

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
glnH	* Escherichia coli str. K-12 substr. MG1655 Site: position = -173 score = 4.92304 sequence = CGCACCAGATTGGTGCC Site: position = -160 score = 5.5379 sequence = TGCCCCAGAATGGTGCA Gene: b0811: Glutamine ABC transporter, substrate-binding component	* Salmonella typhimurium LT2 Site: position = -172 score = 5.08524 sequence = TGCACTAAATCAGTGCC Site: position = -159 score = 5.49637 sequence = TGCCCCAAAACGGTGCG Gene: STM0830: Glutamine ABC transporter, substrate-binding component	* Citrobacter koseri ATCC BAA-895 Site: position = -172 score = 5.08524 sequence = TGCACTAAATCAGTGCC Site: position = -159 score = 5.64414 sequence = TGCCCCAAAACGGTGCA Gene: CKO_02311: Glutamine ABC transporter, substrate-binding component	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -172 score = 4.15595 sequence = CGCACCAAAATGACGCC Site: position = -159 score = 5.01632 sequence = CGCCCCACCATGGTGCA Gene: KPN_00840: Glutamine ABC transporter, substrate-binding component	* Enterobacter sp. 638 Site: position = -172 score = 5.03899 sequence = CGCACCAAAACAGTGCC Site: position = -159 score = 4.46457 sequence = TGCCTCACTTTGGTGCA Gene: Ent638_1298: Glutamine ABC transporter, substrate-binding component	* Erwinia amylovora ATCC 49946 Site: position = -161 score = 4.93804 sequence = CACCCCAAAATAGTGCA Gene: EAM_1270: Glutamine ABC transporter, substrate-binding component	Yersinia pestis KIM Gene: y1675: Glutamine ABC transporter, substrate-binding component	* Serratia proteamaculans 568 Site: position = -176 score = 4.23629 sequence = AGCACCATTTTGGGGCC Site: position = -163 score = 4.30962 sequence = GGCCTCAATTTGGTGCA Gene: Spro_1479: Glutamine ABC transporter, substrate-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2768: Glutamine ABC transporter, substrate-binding component	Edwardsiella tarda EIB202 Gene: ETAE_2307: Glutamine ABC transporter, substrate-binding component	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Glutamine ABC transporter, substrate-binding component
glnP	Escherichia coli str. K-12 substr. MG1655 Gene: b0810: Glutamine ABC transporter, transmembrane component	Salmonella typhimurium LT2 Gene: STM0829: Glutamine ABC transporter, transmembrane component	Citrobacter koseri ATCC BAA-895 Gene: CKO_02312: Glutamine ABC transporter, transmembrane component	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00839: Glutamine ABC transporter, transmembrane component	Enterobacter sp. 638 Gene: Ent638_1297: Glutamine ABC transporter, transmembrane component	Erwinia amylovora ATCC 49946 Gene: EAM_1269: Glutamine ABC transporter, transmembrane component	Yersinia pestis KIM Gene: y1674: Glutamine ABC transporter, transmembrane component	Serratia proteamaculans 568 Gene: Spro_1478: Glutamine ABC transporter, transmembrane component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2769: Glutamine ABC transporter, transmembrane component	Edwardsiella tarda EIB202 Gene: ETAE_2308: Glutamine ABC transporter, transmembrane component	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Glutamine ABC transporter, transmembrane component
glnQ	Escherichia coli str. K-12 substr. MG1655 Gene: b0809: Glutamine ABC transporter, ATP-binding component	Salmonella typhimurium LT2 Gene: STM0828: Glutamine ABC transporter, ATP-binding component	Citrobacter koseri ATCC BAA-895 Gene: CKO_02314: Glutamine ABC transporter, ATP-binding component	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00838: Glutamine ABC transporter, ATP-binding component	Enterobacter sp. 638 Gene: Ent638_1296: Glutamine ABC transporter, ATP-binding component	Erwinia amylovora ATCC 49946 Gene: EAM_1268: Glutamine ABC transporter, ATP-binding component	Yersinia pestis KIM Gene: y1673: Glutamine ABC transporter, ATP-binding component	Serratia proteamaculans 568 Gene: Spro_1477: Glutamine ABC transporter, ATP-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2770: Glutamine ABC transporter, ATP-binding component	Edwardsiella tarda EIB202 Gene: ETAE_2309: Glutamine ABC transporter, ATP-binding component	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Glutamine ABC transporter, ATP-binding component

CRON 2.
EAM_0872	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -211 score = 3.94606 sequence = GGCGCCAGCGTGGTGCT Site: position = -193 score = 5.07122 sequence = TGCATTATTATGGTGCA Gene: KPN_01766: Predicted ABC transporter, substrate-binding component	Enterobacter sp. 638	* Erwinia amylovora ATCC 49946 Site: position = -247 score = 3.71611 sequence = GGCGCCAGTCTGGTGCT Site: position = -229 score = 4.32725 sequence = TGCCCTATTTCGGGGCA Gene: EAM_0872: Predicted ABC transporter, substrate-binding component	* Yersinia pestis KIM Site: position = -205 score = 5.45272 sequence = TGCACCTAAATGGTGCG Gene: y0932: Predicted ABC transporter, substrate-binding component	* Serratia proteamaculans 568 Site: position = -214 score = 4.46028 sequence = AGCGCCATTTTGGTGCT Site: position = -195 score = 4.52364 sequence = CGCACTTTGATGGTGCG Gene: Spro_0932: Predicted ABC transporter, substrate-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3495: Predicted ABC transporter, substrate-binding component	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Predicted ABC transporter, substrate-binding component
EAM_0873	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01765: Predicted ABC transporter, permease component 1	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0873: Predicted ABC transporter, permease component 1	Yersinia pestis KIM Gene: y0933: Predicted ABC transporter, permease component 1	Serratia proteamaculans 568 Gene: Spro_0933: Predicted ABC transporter, permease component 1	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3494: Predicted ABC transporter, permease component 1	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Predicted ABC transporter, permease component 1
EAM_0874	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01764: Predicted ABC transporter, permease component 2	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0874: Predicted ABC transporter, permease component 2	Yersinia pestis KIM Gene: y0934: Predicted ABC transporter, permease component 2	Serratia proteamaculans 568 Gene: Spro_0934: Predicted ABC transporter, permease component 2	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3493: Predicted ABC transporter, permease component 2	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Predicted ABC transporter, permease component 2
EAM_0875	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01763: Predicted ABC transporter, ATP-binding component	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0875: Predicted ABC transporter, ATP-binding component	Yersinia pestis KIM Gene: y0935: Predicted ABC transporter, ATP-binding component	Serratia proteamaculans 568 Gene: Spro_0935: Predicted ABC transporter, ATP-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3492: Predicted ABC transporter, ATP-binding component	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Predicted ABC transporter, ATP-binding component
pucG	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01762: Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0876: Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_0936: Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3491: Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)
amaB	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01761: N-carbamoyl-L-amino acid hydrolase	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0877: N-carbamoyl-L-amino acid hydrolase	Yersinia pestis KIM Gene: y0939: N-carbamoyl-L-amino acid hydrolase	Serratia proteamaculans 568 Gene: Spro_0937: N-carbamoyl-L-amino acid hydrolase	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3490: N-carbamoyl-L-amino acid hydrolase	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	N-carbamoyl-L-amino acid hydrolase

CRON 3.
nac	* Escherichia coli str. K-12 substr. MG1655 Site: position = -205 score = 5.11375 sequence = TGAACCATCGTGGTGCA Gene: b1988: Nitrogen assimilation transcriptional regulator, LysR family	Salmonella typhimurium LT2	* Citrobacter koseri ATCC BAA-895 Site: position = -206 score = 4.77352 sequence = TGCGCCATTCTGGTGCA Gene: CKO_00955: Nitrogen assimilation transcriptional regulator, LysR family	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -206 score = 4.97611 sequence = TGCACCGTTGTAGTGCG Gene: KPN_02437: Nitrogen assimilation transcriptional regulator, LysR family	* Enterobacter sp. 638 Site: position = -206 score = 4.81569 sequence = TGCACGATTCTGGTGCA Gene: Ent638_2564: Nitrogen assimilation transcriptional regulator, LysR family	* Erwinia amylovora ATCC 49946 Site: position = -228 score = 4.25212 sequence = TGCACCATTAACGAGCA Gene: EAM_2112: Nitrogen assimilation transcriptional regulator, LysR family	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_3129: Nitrogen assimilation transcriptional regulator, LysR family	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -197 score = 4.53342 sequence = TGCTTTAAGATGGTGCA Gene: ECA2888: Nitrogen assimilation transcriptional regulator, LysR family	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Nitrogen assimilation transcriptional regulator, LysR family

CRON 4.
hisJ	* Escherichia coli str. K-12 substr. MG1655 Site: position = -162 score = 5.51295 sequence = TGCACTATCGTGGTGCA Gene: b2309: Histidine ABC transporter, substrate-binding component	* Salmonella typhimurium LT2 Site: position = -211 score = 4.36284 sequence = GGAACTATCACGGTGCA Site: position = -182 score = 5.0637 sequence = TGCACCTTTTTGGTGCA Gene: STM2354: Histidine ABC transporter, substrate-binding component	* Citrobacter koseri ATCC BAA-895 Site: position = -212 score = 4.30662 sequence = TTAACCATCACGGTGCG Site: position = -183 score = 5.76713 sequence = TGCACCATCATGGTGCG Gene: CKO_00478: Histidine ABC transporter, substrate-binding component	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -215 score = 5.31458 sequence = TGCCCCAAAAGGGTGCA Site: position = -185 score = 3.95472 sequence = TGGATCATTTCAGTGCA Gene: KPN_02699: Histidine ABC transporter, substrate-binding component	* Enterobacter sp. 638 Site: position = -212 score = 4.1003 sequence = TTCCCTGTCACGGTGCG Site: position = -182 score = 5.22141 sequence = TGACCCAATATGGTGCA Gene: Ent638_2858: Histidine ABC transporter, substrate-binding component	Erwinia amylovora ATCC 49946 Gene: EAM_2316: Histidine ABC transporter, substrate-binding component	* Yersinia pestis KIM Site: position = -123 score = 4.78542 sequence = AGCACTGAAATGGGGCA Gene: y1607: Histidine ABC transporter, substrate-binding component	* Serratia proteamaculans 568 Site: position = -265 score = 4.37691 sequence = CGCACTGAATTAGGGCG Site: position = -243 score = 4.28544 sequence = TGCACCATAATGATCCC Gene: Spro_3326: Histidine ABC transporter, substrate-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3050: Histidine ABC transporter, substrate-binding component	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Histidine ABC transporter, substrate-binding component
hisQ	Escherichia coli str. K-12 substr. MG1655 Gene: b2308: Histidine ABC transporter, transmembrane component 1	Salmonella typhimurium LT2 Gene: STM2353: Histidine ABC transporter, transmembrane component 1	Citrobacter koseri ATCC BAA-895 Gene: CKO_00479: Histidine ABC transporter, transmembrane component 1	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02698: Histidine ABC transporter, transmembrane component 1	Enterobacter sp. 638 Gene: Ent638_2857: Histidine ABC transporter, transmembrane component 1	Erwinia amylovora ATCC 49946 Gene: EAM_2315: Histidine ABC transporter, transmembrane component 1	Yersinia pestis KIM Gene: y1608: Histidine ABC transporter, transmembrane component 1	Serratia proteamaculans 568 Gene: Spro_3325: Histidine ABC transporter, transmembrane component 1	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3049: Histidine ABC transporter, transmembrane component 1	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Histidine ABC transporter, transmembrane component 1
hisM	Escherichia coli str. K-12 substr. MG1655 Gene: b2307: Histidine ABC transporter, transmembrane component 2	Salmonella typhimurium LT2 Gene: STM2352: Histidine ABC transporter, transmembrane component 2	Citrobacter koseri ATCC BAA-895 Gene: CKO_00480: Histidine ABC transporter, transmembrane component 2	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02697: Histidine ABC transporter, transmembrane component 2	Enterobacter sp. 638 Gene: Ent638_2856: Histidine ABC transporter, transmembrane component 2	Erwinia amylovora ATCC 49946 Gene: EAM_2314: Histidine ABC transporter, transmembrane component 2	Yersinia pestis KIM Gene: y1609: Histidine ABC transporter, transmembrane component 2	Serratia proteamaculans 568 Gene: Spro_3324: Histidine ABC transporter, transmembrane component 2	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3048: Histidine ABC transporter, transmembrane component 2	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Histidine ABC transporter, transmembrane component 2
hisP	Escherichia coli str. K-12 substr. MG1655 Gene: b2306: Histidine ABC transporter, ATP-binding component	Salmonella typhimurium LT2 Gene: STM2351: Histidine ABC transporter, ATP-binding component	Citrobacter koseri ATCC BAA-895 Gene: CKO_00481: Histidine ABC transporter, ATP-binding component	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02696: Histidine ABC transporter, ATP-binding component	Enterobacter sp. 638 Gene: Ent638_2855: Histidine ABC transporter, ATP-binding component	Erwinia amylovora ATCC 49946 Gene: EAM_2313: Histidine ABC transporter, ATP-binding component	Yersinia pestis KIM Gene: y1610: Histidine ABC transporter, ATP-binding component	Serratia proteamaculans 568 Gene: Spro_3323: Histidine ABC transporter, ATP-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3047: Histidine ABC transporter, ATP-binding component	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Histidine ABC transporter, ATP-binding component

CRON 5.
glnK	* Escherichia coli str. K-12 substr. MG1655 Site: position = -137 score = 5.19595 sequence = TGCACTGTCATAGTGCG Gene: b0450: nitrogen regulatory protein P-II	* Salmonella typhimurium LT2 Site: position = -177 score = 5.18526 sequence = TGCACCGTCGTGGTGCG Gene: STM0462: nitrogen regulatory protein P-II	* Citrobacter koseri ATCC BAA-895 Site: position = -147 score = 5.25522 sequence = TGCACCGTTATAGTGCG Gene: CKO_02708: nitrogen regulatory protein P-II	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -181 score = 5.26945 sequence = TGCACCGTTGTGGTGCA Gene: KPN_00413: nitrogen regulatory protein P-II	* Enterobacter sp. 638 Site: position = -160 score = 5.34153 sequence = TGCACTGTCATGGTGCG Gene: Ent638_0918: nitrogen regulatory protein P-II	* Erwinia amylovora ATCC 49946 Site: position = -209 score = 4.74542 sequence = TGCATCATTTTAGTGCG Site: position = -189 score = 5.05114 sequence = TGAACTATTTTGGTGCA Gene: EAM_1004: nitrogen regulatory protein P-II	* Yersinia pestis KIM Site: position = -191 score = 5.80673 sequence = TGCACCAACTTGGTGCG Gene: y1041: nitrogen regulatory protein P-II	* Serratia proteamaculans 568 Site: position = -192 score = 5.33598 sequence = CGCACCAAAGTAGTGCG Gene: Spro_1109: nitrogen regulatory protein P-II	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -244 score = 5.80892 sequence = TGCACCAACTTAGTGCA Gene: ECA1160: nitrogen regulatory protein P-II	* Edwardsiella tarda EIB202 Site: position = -152 score = 5.15436 sequence = TGCACCGTTTTGGTGCT Gene: ETAE_1003: nitrogen regulatory protein P-II	* Proteus mirabilis HI4320 Site: position = -114 score = 4.7171 sequence = TGCACTAAGTTAGTGAG Gene: PMI0126: nitrogen regulatory protein P-II	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -173 score = 5.48218 sequence = TGCACTAATTCGGTGCA Gene: plu3857: nitrogen regulatory protein P-II	nitrogen regulatory protein P-II
amtB	Escherichia coli str. K-12 substr. MG1655 Gene: b0451: Ammonium transporter	Salmonella typhimurium LT2 Gene: STM0463: Ammonium transporter	Citrobacter koseri ATCC BAA-895 Gene: CKO_02707: Ammonium transporter	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00414: Ammonium transporter	Enterobacter sp. 638 Gene: Ent638_0919: Ammonium transporter	Erwinia amylovora ATCC 49946 Gene: EAM_1005: Ammonium transporter	Yersinia pestis KIM Gene: y1042: Ammonium transporter	Serratia proteamaculans 568 Gene: Spro_1110: Ammonium transporter	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1161: Ammonium transporter	Edwardsiella tarda EIB202 Gene: ETAE_1004: Ammonium transporter	Proteus mirabilis HI4320 Gene: PMI0127: Ammonium transporter	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3856: Ammonium transporter	Ammonium transporter

CRON 6.
glnA	* Escherichia coli str. K-12 substr. MG1655 Site: position = -221 score = 5.8709 sequence = TGCACCAACATGGTGCT Site: position = -189 score = 5.39525 sequence = AGCACTATATTGGTGCA Gene: b3870: Glutamine synthetase type I (EC 6.3.1.2)	* Salmonella typhimurium LT2 Site: position = -224 score = 5.52822 sequence = TGCACCAATGTGGTGCT Site: position = -192 score = 5.20866 sequence = AGCACTATTTTGGTGCA Gene: STM4007: Glutamine synthetase type I (EC 6.3.1.2)	* Citrobacter koseri ATCC BAA-895 Site: position = -202 score = 5.8709 sequence = TGCACCAACATGGTGCT Site: position = -170 score = 5.39525 sequence = AGCACTATATTGGTGCA Gene: CKO_03140: Glutamine synthetase type I (EC 6.3.1.2)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -251 score = 5.99392 sequence = TGCACCAAAATGGTGCT Site: position = -219 score = 5.20866 sequence = AGCACTATTTTGGTGCA Gene: KPN_04178: Glutamine synthetase type I (EC 6.3.1.2)	* Enterobacter sp. 638 Site: position = -237 score = 5.28804 sequence = CGCACCATTATGGTGCT Site: position = -205 score = 5.55055 sequence = AGCACTATAATGGTGCA Gene: Ent638_4096: Glutamine synthetase type I (EC 6.3.1.2)	* Erwinia amylovora ATCC 49946 Site: position = -288 score = 5.1376 sequence = TGCACCAAAATGGTGAC Site: position = -256 score = 5.32837 sequence = AGCACCAGAATGGTGCG Gene: EAM_0032: Glutamine synthetase type I (EC 6.3.1.2)	* Yersinia pestis KIM Site: position = -353 score = 5.46597 sequence = GGCACCAAAATAGTGCA Site: position = -384 score = 5.64929 sequence = TGCACCAAAATAGTGCC Gene: y3804: Glutamine synthetase type I (EC 6.3.1.2)	* Serratia proteamaculans 568 Site: position = -220 score = 5.18095 sequence = TGCACCATTACAGTGCT Site: position = -188 score = 5.19172 sequence = TGCACCATTTAAGTGCA Gene: Spro_4881: Glutamine synthetase type I (EC 6.3.1.2)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -218 score = 5.28303 sequence = TGCACCAAACAAGTGCA Site: position = -186 score = 5.35107 sequence = AGCACCAACTTGGTGCT Gene: ECA0029: Glutamine synthetase type I (EC 6.3.1.2)	* Edwardsiella tarda EIB202 Site: position = -220 score = 5.47161 sequence = TGCACCAAGATTGTGCG Site: position = -188 score = 5.19406 sequence = TGCACCATTATGGAGCA Gene: ETAE_3493: Glutamine synthetase type I (EC 6.3.1.2)	* Proteus mirabilis HI4320 Site: position = -223 score = 5.90634 sequence = TGCACCAAAATTGTGCA Site: position = -189 score = 5.75104 sequence = TGCACCAAATTTGTGCA Gene: PMI2882: Glutamine synthetase type I (EC 6.3.1.2)	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -303 score = 5.12476 sequence = CGCACTAATATTGTGCG Site: position = -272 score = 5.90065 sequence = TGCACCAATATAGTGCA Gene: plu0237: Glutamine synthetase type I (EC 6.3.1.2)	Glutamine synthetase type I (EC 6.3.1.2)

CRON 7.
ntrB	* Escherichia coli str. K-12 substr. MG1655 Site: position = -38 score = 6.10998 sequence = TGCACTAAAATGGTGCA Gene: b3869: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Salmonella typhimurium LT2 Site: position = -39 score = 6.10998 sequence = TGCACTAAAATGGTGCA Gene: STM4006: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Citrobacter koseri ATCC BAA-895 Site: position = -40 score = 5.95468 sequence = TGCACTAAATTGGTGCA Gene: CKO_03143: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -39 score = 5.95468 sequence = TGCACTAAATTGGTGCA Gene: KPN_04177: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Enterobacter sp. 638 Site: position = -38 score = 5.8091 sequence = TGCACTAAATTAGTGCA Gene: Ent638_4097: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Erwinia amylovora ATCC 49946 Site: position = -40 score = 5.66771 sequence = TGCACTAAGTTGGTGCA Gene: EAM_0031: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Yersinia pestis KIM Site: position = -29 score = 5.31766 sequence = TGCACCGAAACTGTGCA Gene: y3805: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Serratia proteamaculans 568 Site: position = -29 score = 5.75125 sequence = TGCACTAAAAAGGTGCA Gene: Spro_4882: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -29 score = 5.15771 sequence = TGCACCATGCTGGTGCG Gene: ECA0028: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Edwardsiella tarda EIB202 Site: position = -28 score = 6.08724 sequence = TGCACCAAAATAGTGCA Gene: ETAE_3494: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Proteus mirabilis HI4320 Site: position = -32 score = 6.10998 sequence = TGCACTAAAATGGTGCA Gene: PMI2883: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -26 score = 5.72851 sequence = TGCACCAAAAAAGTGCA Gene: plu0236: Nitrogen regulation protein NR(II) (EC 2.7.3.-)	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC	Escherichia coli str. K-12 substr. MG1655 Gene: b3868: Nitrogen regulation protein NR(I), Fis family	Salmonella typhimurium LT2 Gene: STM4005: Nitrogen regulation protein NR(I), Fis family	Citrobacter koseri ATCC BAA-895 Gene: CKO_03144: Nitrogen regulation protein NR(I), Fis family	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_04176: Nitrogen regulation protein NR(I), Fis family	Enterobacter sp. 638 Gene: Ent638_4098: Nitrogen regulation protein NR(I), Fis family	Erwinia amylovora ATCC 49946 Gene: EAM_0030: Nitrogen regulation protein NR(I), Fis family	Yersinia pestis KIM Gene: y3806: Nitrogen regulation protein NR(I), Fis family	Serratia proteamaculans 568 Gene: Spro_4883: Nitrogen regulation protein NR(I), Fis family	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA0027: Nitrogen regulation protein NR(I), Fis family	Edwardsiella tarda EIB202 Gene: ETAE_3495: Nitrogen regulation protein NR(I), Fis family	Proteus mirabilis HI4320 Gene: PMI2884: Nitrogen regulation protein NR(I), Fis family	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu0235: Nitrogen regulation protein NR(I), Fis family	Nitrogen regulation protein NR(I), Fis family

CRON 8.
potG	* Escherichia coli str. K-12 substr. MG1655 Site: position = -47 score = 5.37917 sequence = CGCACCATTATGGTGCG Gene: b0855: Putrescine ABC transporter, ATP-binding component	Salmonella typhimurium LT2 Gene: STM0878: Putrescine ABC transporter, ATP-binding component	* Citrobacter koseri ATCC BAA-895 Site: position = -53 score = 4.62401 sequence = CGCACTTTTATGGTGCG Gene: CKO_02252: Putrescine ABC transporter, ATP-binding component	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -39 score = 5.18918 sequence = AGCACCAGGATGGTGCA Gene: KPN_00886: Putrescine ABC transporter, ATP-binding component	* Enterobacter sp. 638 Site: position = -53 score = 4.84242 sequence = CGCACCGAAAGGGTGCG Gene: Ent638_1369: Putrescine ABC transporter, ATP-binding component	Erwinia amylovora ATCC 49946 Gene: EAM_1302: Putrescine ABC transporter, ATP-binding component	Yersinia pestis KIM Gene: y2849: Putrescine ABC transporter, ATP-binding component	Serratia proteamaculans 568 Gene: Spro_1646: Putrescine ABC transporter, ATP-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2676: Putrescine ABC transporter, ATP-binding component	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Putrescine ABC transporter, ATP-binding component
potH	Escherichia coli str. K-12 substr. MG1655 Gene: b0856: Putrescine ABC transporter, transmembrane component 2	Salmonella typhimurium LT2 Gene: STM0879: Putrescine ABC transporter, transmembrane component 2	Citrobacter koseri ATCC BAA-895 Gene: CKO_02251: Putrescine ABC transporter, transmembrane component 2	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00887: Putrescine ABC transporter, transmembrane component 2	Enterobacter sp. 638 Gene: Ent638_1370: Putrescine ABC transporter, transmembrane component 2	Erwinia amylovora ATCC 49946 Gene: EAM_1303: Putrescine ABC transporter, transmembrane component 2	Yersinia pestis KIM Gene: y2848: Putrescine ABC transporter, transmembrane component 2	Serratia proteamaculans 568 Gene: Spro_1647: Putrescine ABC transporter, transmembrane component 2	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2675: Putrescine ABC transporter, transmembrane component 2	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Putrescine ABC transporter, transmembrane component 2
potI	Escherichia coli str. K-12 substr. MG1655 Gene: b0857: Putrescine ABC transporter, transmembrane component 1	Salmonella typhimurium LT2 Gene: STM0880: Putrescine ABC transporter, transmembrane component 1	Citrobacter koseri ATCC BAA-895 Gene: CKO_02250: Putrescine ABC transporter, transmembrane component 1	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00888: Putrescine ABC transporter, transmembrane component 1	Enterobacter sp. 638 Gene: Ent638_1371: Putrescine ABC transporter, transmembrane component 1	Erwinia amylovora ATCC 49946 Gene: EAM_1304: Putrescine ABC transporter, transmembrane component 1	Yersinia pestis KIM Gene: y2847: Putrescine ABC transporter, transmembrane component 1	Serratia proteamaculans 568 Gene: Spro_1648: Putrescine ABC transporter, transmembrane component 1	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA2674: Putrescine ABC transporter, transmembrane component 1	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Putrescine ABC transporter, transmembrane component 1

CRON 9.
rutA	* Escherichia coli str. K-12 substr. MG1655 Site: position = -168 score = 3.91926 sequence = TGCACTCTCATCGCGCA Gene: b1012: Pyrimidine oxygenase	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -189 score = 3.82432 sequence = TGCACTGATTTTGACCA Site: position = -223 score = 4.13489 sequence = TGCACCCTGATTGCGCA Gene: KPN_01038: Pyrimidine oxygenase	* Enterobacter sp. 638 Site: position = -227 score = 4.10023 sequence = TGCACCGCCATCGCGCA Gene: Ent638_1525: Pyrimidine oxygenase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	* Serratia proteamaculans 568 Site: position = -230 score = 3.87654 sequence = TGCACCTTTAATGAGCA Gene: Spro_1823: Pyrimidine oxygenase	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Pyrimidine oxygenase
rutB	Escherichia coli str. K-12 substr. MG1655 Gene: b1011: Peroxyureidoacrylate / ureidoacrylate amido hydrolase	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01037: Peroxyureidoacrylate / ureidoacrylate amido hydrolase	Enterobacter sp. 638 Gene: Ent638_1524: Peroxyureidoacrylate / ureidoacrylate amido hydrolase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_1822: Peroxyureidoacrylate / ureidoacrylate amido hydrolase	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Peroxyureidoacrylate / ureidoacrylate amido hydrolase
rutC	Escherichia coli str. K-12 substr. MG1655 Gene: b1010: Aminoacrylate peracid reductase	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01036: Aminoacrylate peracid reductase	Enterobacter sp. 638 Gene: Ent638_1523: Aminoacrylate peracid reductase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_1821: Aminoacrylate peracid reductase	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Aminoacrylate peracid reductase
rutD	Escherichia coli str. K-12 substr. MG1655 Gene: b1009: Aminoacrylate hydrolase	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01035: Aminoacrylate hydrolase	Enterobacter sp. 638 Gene: Ent638_1522: Aminoacrylate hydrolase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_1820: Aminoacrylate hydrolase	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Aminoacrylate hydrolase
rutE	Escherichia coli str. K-12 substr. MG1655 Gene: b1008: 3-hydroxy propionic acid dehydrogenase	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01034: 3-hydroxy propionic acid dehydrogenase	Enterobacter sp. 638 Gene: Ent638_1521: 3-hydroxy propionic acid dehydrogenase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	3-hydroxy propionic acid dehydrogenase
rutF	Escherichia coli str. K-12 substr. MG1655 Gene: b1007: Flavin reductase	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01033: Flavin reductase	Enterobacter sp. 638 Gene: Ent638_1520: Flavin reductase	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_1819: Flavin reductase	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Flavin reductase
rutG	Escherichia coli str. K-12 substr. MG1655 Gene: b1006: Uracil permease	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01032: Uracil permease	Enterobacter sp. 638 Gene: Ent638_1519: Uracil permease	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_1818: Uracil permease	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Uracil permease

CRON 10.
astC	* Escherichia coli str. K-12 substr. MG1655 Site: position = -323 score = 4.02302 sequence = TGCCCGCTTTTGGTGCG Site: position = -303 score = 3.89381 sequence = TGCGTCAGAATGGCGCA Gene: b1748: Succinylornithine transaminase (EC 2.6.1.81)	* Salmonella typhimurium LT2 Site: position = -304 score = 4.1174 sequence = TGCGCCAGAACGGGGCG Site: position = -334 score = 3.18351 sequence = AGCGCGAAAATGGCACG Gene: STM1303: Succinylornithine transaminase (EC 2.6.1.81)	Citrobacter koseri ATCC BAA-895 Gene: CKO_01774: Succinylornithine transaminase (EC 2.6.1.81)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -305 score = 4.11453 sequence = CGCGCCAAAAAAGGGCA Gene: KPN_01221: Succinylornithine transaminase (EC 2.6.1.81)	* Enterobacter sp. 638 Site: position = -304 score = 3.93837 sequence = TGCCCTCAAACAGGGCG Site: position = -324 score = 3.94782 sequence = TGCACCATTTCGACGCG Gene: Ent638_1696: Succinylornithine transaminase (EC 2.6.1.81)	* Erwinia amylovora ATCC 49946 Site: position = -357 score = 3.65778 sequence = TGAGTCATCCTGGTGCA Site: position = -370 score = 3.78799 sequence = TGCGTCATATTGGTGAG Gene: EAM_1606: Succinylornithine transaminase (EC 2.6.1.81)	* Yersinia pestis KIM Site: position = -382 score = 3.55162 sequence = TGTACATTTGTAGTGCA Gene: y2349: Succinylornithine transaminase (EC 2.6.1.81)	Serratia proteamaculans 568 Gene: Spro_2844: Succinylornithine transaminase (EC 2.6.1.81)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3110: Succinylornithine transaminase (EC 2.6.1.81)	Succinylornithine transaminase (EC 2.6.1.81)
astA	Escherichia coli str. K-12 substr. MG1655 Gene: b1747: Arginine N-succinyltransferase (EC 2.3.1.109)	Salmonella typhimurium LT2 Gene: STM1304: Arginine N-succinyltransferase (EC 2.3.1.109)	Citrobacter koseri ATCC BAA-895 Gene: CKO_01773: Arginine N-succinyltransferase (EC 2.3.1.109)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01222: Arginine N-succinyltransferase (EC 2.3.1.109)	Enterobacter sp. 638 Gene: Ent638_1697: Arginine N-succinyltransferase (EC 2.3.1.109)	Erwinia amylovora ATCC 49946 Gene: EAM_1607: Arginine N-succinyltransferase (EC 2.3.1.109)	Yersinia pestis KIM Gene: y2348: Arginine N-succinyltransferase (EC 2.3.1.109)	Serratia proteamaculans 568 Gene: Spro_2843: Arginine N-succinyltransferase (EC 2.3.1.109)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3109: Arginine N-succinyltransferase (EC 2.3.1.109)	Arginine N-succinyltransferase (EC 2.3.1.109)
astD	Escherichia coli str. K-12 substr. MG1655 Gene: b1746: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Salmonella typhimurium LT2 Gene: STM1305: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Citrobacter koseri ATCC BAA-895 Gene: CKO_01772: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01223: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Enterobacter sp. 638 Gene: Ent638_1698: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Erwinia amylovora ATCC 49946 Gene: EAM_1608: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Yersinia pestis KIM Gene: y2347: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Serratia proteamaculans 568 Gene: Spro_2842: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3108: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)	Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
astB	Escherichia coli str. K-12 substr. MG1655 Gene: b1745: Succinylarginine dihydrolase (EC 3.5.3.23)	Salmonella typhimurium LT2 Gene: STM1306: Succinylarginine dihydrolase (EC 3.5.3.23)	Citrobacter koseri ATCC BAA-895 Gene: CKO_01771: Succinylarginine dihydrolase (EC 3.5.3.23)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01224: Succinylarginine dihydrolase (EC 3.5.3.23)	Enterobacter sp. 638 Gene: Ent638_1699: Succinylarginine dihydrolase (EC 3.5.3.23)	Erwinia amylovora ATCC 49946 Gene: EAM_1609: Succinylarginine dihydrolase (EC 3.5.3.23)	Yersinia pestis KIM Gene: y2346: Succinylarginine dihydrolase (EC 3.5.3.23)	Serratia proteamaculans 568 Gene: Spro_2841: Succinylarginine dihydrolase (EC 3.5.3.23)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3107: Succinylarginine dihydrolase (EC 3.5.3.23)	Succinylarginine dihydrolase (EC 3.5.3.23)
astE	Escherichia coli str. K-12 substr. MG1655 Gene: b1744: Succinylglutamate desuccinylase (EC 3.5.1.96)	Salmonella typhimurium LT2 Gene: STM1307: Succinylglutamate desuccinylase (EC 3.5.1.96)	Citrobacter koseri ATCC BAA-895 Gene: CKO_01770: Succinylglutamate desuccinylase (EC 3.5.1.96)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01225: Succinylglutamate desuccinylase (EC 3.5.1.96)	Enterobacter sp. 638 Gene: Ent638_1700: Succinylglutamate desuccinylase (EC 3.5.1.96)	Erwinia amylovora ATCC 49946 Gene: EAM_1610: Succinylglutamate desuccinylase (EC 3.5.1.96)	Yersinia pestis KIM Gene: y2345: Succinylglutamate desuccinylase (EC 3.5.1.96)	Serratia proteamaculans 568 Gene: Spro_2840: Succinylglutamate desuccinylase (EC 3.5.1.96)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu3106: Succinylglutamate desuccinylase (EC 3.5.1.96)	Succinylglutamate desuccinylase (EC 3.5.1.96)

CRON 11.
CKO_01526	Escherichia coli str. K-12 substr. MG1655	Salmonella typhimurium LT2	* Citrobacter koseri ATCC BAA-895 Site: position = -151 score = 3.53596 sequence = TGCACAAATGTTGATCA Gene: CKO_01526: Predicted transcriptional regulator, RpiR family	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	* Serratia proteamaculans 568 Site: position = -204 score = 4.35283 sequence = TGCCCAATTGTTGTGCA Gene: Spro_2345: Predicted transcriptional regulator, RpiR family	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Predicted transcriptional regulator, RpiR family
ddpX	* Escherichia coli str. K-12 substr. MG1655 Site: position = -127 score = 3.53596 sequence = TGCACAAATGTTGATCA Site: position = -148 score = 4.067 sequence = TGCACCAAAACTGCACT Gene: b1488: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01525: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2346: D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	D-alanyl-D-alanine dipeptidase (EC 3.4.13.-)
ddpA	Escherichia coli str. K-12 substr. MG1655 Gene: b1487: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01524: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2347: Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Dipeptide ABC transporter, substrate-binding component (TC 3.A.1.5.2)
ddpB	Escherichia coli str. K-12 substr. MG1655 Gene: b1486: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01523: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2348: Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Dipeptide ABC transporter, transmembrane component 1 (TC 3.A.1.5.2)
ddpC	Escherichia coli str. K-12 substr. MG1655 Gene: b1485: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01522: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2349: Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Dipeptide ABC transporter, transmembrane component 2 (TC 3.A.1.5.2)
ddpD	Escherichia coli str. K-12 substr. MG1655 Gene: b1484: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01521: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2350: Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Dipeptide ABC transporter, transmembrane component 3 (TC 3.A.1.5.2)
ddpF	Escherichia coli str. K-12 substr. MG1655 Gene: b1483: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2)	Salmonella typhimurium LT2	Citrobacter koseri ATCC BAA-895 Gene: CKO_01520: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Enterobacter sp. 638	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568 Gene: Spro_2351: Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2)	Erwinia carotovora subsp. atroseptica SCRI1043	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Dipeptide ABC transporter, ABC-binding component (TC 3.A.1.5.2)

CRON 12.
ygjG	* Escherichia coli str. K-12 substr. MG1655 Site: position = -215 score = 4.5625 sequence = TGCCCTGAAAACGTGCA Gene: b3073: Putrescine aminotransferase (EC 2.6.1.82)	Salmonella typhimurium LT2 Gene: STM3218: Putrescine aminotransferase (EC 2.6.1.82)	* Citrobacter koseri ATCC BAA-895 Site: position = -84 score = 4.63093 sequence = CGCACCGTTCTGGTGCG Gene: CKO_04486: Putrescine aminotransferase (EC 2.6.1.82)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03501: Putrescine aminotransferase (EC 2.6.1.82)	* Enterobacter sp. 638 Site: position = -215 score = 5.02558 sequence = TGCACTACTACAGTGCA Gene: Ent638_3528: Putrescine aminotransferase (EC 2.6.1.82)	Erwinia amylovora ATCC 49946	Yersinia pestis KIM	Serratia proteamaculans 568	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -219 score = 4.03958 sequence = CGCCCCAAAAGAGGGCG Gene: ECA1543: Putrescine aminotransferase (EC 2.6.1.82)	Edwardsiella tarda EIB202	Proteus mirabilis HI4320	Photorhabdus luminescens subsp. laumondii TTO1	Putrescine aminotransferase (EC 2.6.1.82)

CRON 13.
gltI	* Escherichia coli str. K-12 substr. MG1655 Site: position = -87 score = 4.43177 sequence = TGCACAATAAAGTTGCA Gene: b0655: Glutamate-aspartate ABC transporter, substrate-binding component	* Salmonella typhimurium LT2 Site: position = -211 score = 4.01068 sequence = CGCACCAAAATCGATCA Site: position = -189 score = 4.55791 sequence = AGCACCTGAACGGTGCA Gene: STM0665: Glutamate-aspartate ABC transporter, substrate-binding component	* Citrobacter koseri ATCC BAA-895 Site: position = -169 score = 4.80447 sequence = AGCACCCAAACAGTGCA Site: position = -140 score = 4.20678 sequence = TGCCTCTAAACGGTGCG Gene: CKO_02507: Glutamate-aspartate ABC transporter, substrate-binding component	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -171 score = 4.61648 sequence = CGCGCTATTTTGGTGCA Gene: KPN_00681: Glutamate-aspartate ABC transporter, substrate-binding component	* Enterobacter sp. 638 Site: position = -230 score = 4.42894 sequence = CGCACCATCAAAGTTCA Site: position = -208 score = 5.27961 sequence = AGCACCGAAACGGTGCA Gene: Ent638_1182: Glutamate-aspartate ABC transporter, substrate-binding component	* Erwinia amylovora ATCC 49946 Site: position = -187 score = 5.17458 sequence = TGCGCTAAATTGGTGCG Gene: EAM_1136: Glutamate-aspartate ABC transporter, substrate-binding component	* Yersinia pestis KIM Site: position = -278 score = 4.1508 sequence = TGCCTCTATTTGGTGCG Gene: y1189: Glutamate-aspartate ABC transporter, substrate-binding component	* Serratia proteamaculans 568 Site: position = -212 score = 4.80118 sequence = GGCACCATAAGGGTGCA Site: position = -183 score = 4.96305 sequence = TGCATTAATTTGGTGCG Gene: Spro_1214: Glutamate-aspartate ABC transporter, substrate-binding component	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -300 score = 5.31518 sequence = CGCACCAAATTGGTGCC Gene: ECA1314: Glutamate-aspartate ABC transporter, substrate-binding component	* Edwardsiella tarda EIB202 Site: position = -228 score = 4.31579 sequence = TGCACCCTGATAGCGCA Site: position = -176 score = 4.71627 sequence = TGCCATAAAACGGTGCG Gene: ETAE_2632: Glutamate-aspartate ABC transporter, substrate-binding component	Proteus mirabilis HI4320 Gene: PMI0437: Glutamate-aspartate ABC transporter, substrate-binding component	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -239 score = 4.17508 sequence = TGCACCAAAAAAATGAT Gene: plu1307: Glutamate-aspartate ABC transporter, substrate-binding component	Glutamate-aspartate ABC transporter, substrate-binding component
gltJ	Escherichia coli str. K-12 substr. MG1655 Gene: b0654: Glutamate-aspartate ABC transporter, transmembrane component 1	Salmonella typhimurium LT2 Gene: STM0664: Glutamate-aspartate ABC transporter, transmembrane component 1	Citrobacter koseri ATCC BAA-895 Gene: CKO_02509: Glutamate-aspartate ABC transporter, transmembrane component 1	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00680: Glutamate-aspartate ABC transporter, transmembrane component 1	Enterobacter sp. 638 Gene: Ent638_1181: Glutamate-aspartate ABC transporter, transmembrane component 1	Erwinia amylovora ATCC 49946 Gene: EAM_1135: Glutamate-aspartate ABC transporter, transmembrane component 1	Yersinia pestis KIM Gene: y1188: Glutamate-aspartate ABC transporter, transmembrane component 1	Serratia proteamaculans 568 Gene: Spro_1213: Glutamate-aspartate ABC transporter, transmembrane component 1	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1313: Glutamate-aspartate ABC transporter, transmembrane component 1	Edwardsiella tarda EIB202 Gene: ETAE_2633: Glutamate-aspartate ABC transporter, transmembrane component 1	Proteus mirabilis HI4320 Gene: PMI0436: Glutamate-aspartate ABC transporter, transmembrane component 1	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1306: Glutamate-aspartate ABC transporter, transmembrane component 1	Glutamate-aspartate ABC transporter, transmembrane component 1
gltK	Escherichia coli str. K-12 substr. MG1655 Gene: b0653: Glutamate-aspartate ABC transporter, transmembrane component 2	Salmonella typhimurium LT2 Gene: STM0663: Glutamate-aspartate ABC transporter, transmembrane component 2	Citrobacter koseri ATCC BAA-895 Gene: CKO_02510: Glutamate-aspartate ABC transporter, transmembrane component 2	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00679: Glutamate-aspartate ABC transporter, transmembrane component 2	Enterobacter sp. 638 Gene: Ent638_1180: Glutamate-aspartate ABC transporter, transmembrane component 2	Erwinia amylovora ATCC 49946 Gene: EAM_1134: Glutamate-aspartate ABC transporter, transmembrane component 2	Yersinia pestis KIM Gene: y1187: Glutamate-aspartate ABC transporter, transmembrane component 2	Serratia proteamaculans 568 Gene: Spro_1212: Glutamate-aspartate ABC transporter, transmembrane component 2	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1312: Glutamate-aspartate ABC transporter, transmembrane component 2	Edwardsiella tarda EIB202 Gene: ETAE_2634: Glutamate-aspartate ABC transporter, transmembrane component 2	Proteus mirabilis HI4320 Gene: PMI0435: Glutamate-aspartate ABC transporter, transmembrane component 2	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1305: Glutamate-aspartate ABC transporter, transmembrane component 2	Glutamate-aspartate ABC transporter, transmembrane component 2
gltL	Escherichia coli str. K-12 substr. MG1655 Gene: b0652: Glutamate-aspartate ABC transporter, ATP-binding component	Salmonella typhimurium LT2 Gene: STM0662: Glutamate-aspartate ABC transporter, ATP-binding component	Citrobacter koseri ATCC BAA-895 Gene: CKO_02511: Glutamate-aspartate ABC transporter, ATP-binding component	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_00678: Glutamate-aspartate ABC transporter, ATP-binding component	Enterobacter sp. 638 Gene: Ent638_1179: Glutamate-aspartate ABC transporter, ATP-binding component	Erwinia amylovora ATCC 49946 Gene: EAM_1133: Glutamate-aspartate ABC transporter, ATP-binding component	Yersinia pestis KIM Gene: y1186: Glutamate-aspartate ABC transporter, ATP-binding component	Serratia proteamaculans 568 Gene: Spro_1211: Glutamate-aspartate ABC transporter, ATP-binding component	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1311: Glutamate-aspartate ABC transporter, ATP-binding component	Edwardsiella tarda EIB202 Gene: ETAE_2635: Glutamate-aspartate ABC transporter, ATP-binding component	Proteus mirabilis HI4320 Gene: PMI0434: Glutamate-aspartate ABC transporter, ATP-binding component	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1304: Glutamate-aspartate ABC transporter, ATP-binding component	Glutamate-aspartate ABC transporter, ATP-binding component

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog NtrC - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --