Regulon of NtrC in Erwinia carotovora subsp. atroseptica SCRI1043
| Regulator type: | Transcription factor |
| TF locus tag: | ECA0027 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -29
Score: 5.2 Sequence: TGCACCATGCTGGTGCG
Locus tag: ECA0028
Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: ECA0027
Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family |
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ntrB
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Nitrogen regulation protein NR(II) (EC 2.7.3.-)
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ntrC
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Nitrogen regulation protein NR(I), Fis family
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Position: -218
Score: 5.3 Sequence: TGCACCAAACAAGTGCA
Position: -186
Score: 5.4 Sequence: AGCACCAACTTGGTGCT
Locus tag: ECA0029
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -244
Score: 5.8 Sequence: TGCACCAACTTAGTGCA
Locus tag: ECA1160
Name: glnK Funciton: nitrogen regulatory protein P-II
Locus tag: ECA1161
Name: amtB Funciton: Ammonium transporter |
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glnK
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nitrogen regulatory protein P-II
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amtB
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Ammonium transporter
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Position: -197
Score: 4.5 Sequence: TGCTTTAAGATGGTGCA
Locus tag: ECA2888
Name: nac Funciton: Nitrogen assimilation transcriptional regulator, LysR family |
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nac
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Nitrogen assimilation transcriptional regulator, LysR family
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Position: -219
Score: 4 Sequence: CGCCCCAAAAGAGGGCG
Locus tag: ECA1543
Name: ygjG Funciton: Putrescine aminotransferase (EC 2.6.1.82) |
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ygjG
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Putrescine aminotransferase (EC 2.6.1.82)
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Position: -300
Score: 5.3 Sequence: CGCACCAAATTGGTGCC
Locus tag: ECA1314
Name: gltI Funciton: Glutamate-aspartate ABC transporter, substrate-binding component
Locus tag: ECA1313
Name: gltJ Funciton: Glutamate-aspartate ABC transporter, transmembrane component 1
Locus tag: ECA1312
Name: gltK Funciton: Glutamate-aspartate ABC transporter, transmembrane component 2
Locus tag: ECA1311
Name: gltL Funciton: Glutamate-aspartate ABC transporter, ATP-binding component |
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gltI
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Glutamate-aspartate ABC transporter, substrate-binding component
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gltJ
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Glutamate-aspartate ABC transporter, transmembrane component 1
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gltK
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Glutamate-aspartate ABC transporter, transmembrane component 2
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gltL
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Glutamate-aspartate ABC transporter, ATP-binding component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |