Regulon of NtrC in Enterobacter sp. 638
| Regulator type: | Transcription factor |
| TF locus tag: | Ent638_4098 |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Regulog: | NtrC - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 33 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - NtrC
- By TF family - Fis
- By effector - Phosphorylated NtrB, signal histidine kinase
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -38
Score: 5.8 Sequence: TGCACTAAATTAGTGCA
Locus tag: Ent638_4097
Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Ent638_4098
Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family |
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ntrB
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Nitrogen regulation protein NR(II) (EC 2.7.3.-)
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ntrC
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Nitrogen regulation protein NR(I), Fis family
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Position: -237
Score: 5.3 Sequence: CGCACCATTATGGTGCT
Position: -205
Score: 5.6 Sequence: AGCACTATAATGGTGCA
Locus tag: Ent638_4096
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -227
Score: 4.1 Sequence: TGCACCGCCATCGCGCA
Locus tag: Ent638_1525
Name: rutA Funciton: Pyrimidine oxygenase
Locus tag: Ent638_1524
Name: rutB Funciton: Peroxyureidoacrylate / ureidoacrylate amido hydrolase
Locus tag: Ent638_1523
Name: rutC Funciton: Aminoacrylate peracid reductase
Locus tag: Ent638_1522
Name: rutD Funciton: Aminoacrylate hydrolase
Locus tag: Ent638_1521
Name: rutE Funciton: 3-hydroxy propionic acid dehydrogenase
Locus tag: Ent638_1520
Name: rutF Funciton: Flavin reductase
Locus tag: Ent638_1519
Name: rutG Funciton: Uracil permease |
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rutA
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Pyrimidine oxygenase
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rutB
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Peroxyureidoacrylate / ureidoacrylate amido hydrolase
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rutC
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Aminoacrylate peracid reductase
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rutD
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Aminoacrylate hydrolase
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rutE
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3-hydroxy propionic acid dehydrogenase
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rutF
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Flavin reductase
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rutG
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Uracil permease
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Position: -324
Score: 3.9 Sequence: TGCACCATTTCGACGCG
Position: -304
Score: 3.9 Sequence: TGCCCTCAAACAGGGCG
Locus tag: Ent638_1696
Name: astC Funciton: Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Ent638_1697
Name: astA Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Ent638_1698
Name: astD Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Ent638_1699
Name: astB Funciton: Succinylarginine dihydrolase (EC 3.5.3.23)
Locus tag: Ent638_1700
Name: astE Funciton: Succinylglutamate desuccinylase (EC 3.5.1.96) |
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astC
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Succinylornithine transaminase (EC 2.6.1.81)
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astA
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Arginine N-succinyltransferase (EC 2.3.1.109)
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astD
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Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
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astB
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Succinylarginine dihydrolase (EC 3.5.3.23)
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astE
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Succinylglutamate desuccinylase (EC 3.5.1.96)
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Position: -160
Score: 5.3 Sequence: TGCACTGTCATGGTGCG
Locus tag: Ent638_0918
Name: glnK Funciton: nitrogen regulatory protein P-II
Locus tag: Ent638_0919
Name: amtB Funciton: Ammonium transporter |
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glnK
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nitrogen regulatory protein P-II
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amtB
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Ammonium transporter
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Position: -230
Score: 4.4 Sequence: CGCACCATCAAAGTTCA
Position: -208
Score: 5.3 Sequence: AGCACCGAAACGGTGCA
Locus tag: Ent638_1182
Name: gltI Funciton: Glutamate-aspartate ABC transporter, substrate-binding component
Locus tag: Ent638_1181
Name: gltJ Funciton: Glutamate-aspartate ABC transporter, transmembrane component 1
Locus tag: Ent638_1180
Name: gltK Funciton: Glutamate-aspartate ABC transporter, transmembrane component 2
Locus tag: Ent638_1179
Name: gltL Funciton: Glutamate-aspartate ABC transporter, ATP-binding component |
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gltI
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Glutamate-aspartate ABC transporter, substrate-binding component
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gltJ
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Glutamate-aspartate ABC transporter, transmembrane component 1
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gltK
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Glutamate-aspartate ABC transporter, transmembrane component 2
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gltL
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Glutamate-aspartate ABC transporter, ATP-binding component
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Position: -212
Score: 4.1 Sequence: TTCCCTGTCACGGTGCG
Position: -182
Score: 5.2 Sequence: TGACCCAATATGGTGCA
Locus tag: Ent638_2858
Name: hisJ Funciton: Histidine ABC transporter, substrate-binding component
Locus tag: Ent638_2857
Name: hisQ Funciton: Histidine ABC transporter, transmembrane component 1
Locus tag: Ent638_2856
Name: hisM Funciton: Histidine ABC transporter, transmembrane component 2
Locus tag: Ent638_2855
Name: hisP Funciton: Histidine ABC transporter, ATP-binding component |
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hisJ
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Histidine ABC transporter, substrate-binding component
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hisQ
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Histidine ABC transporter, transmembrane component 1
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hisM
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Histidine ABC transporter, transmembrane component 2
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hisP
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Histidine ABC transporter, ATP-binding component
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Position: -172
Score: 5 Sequence: CGCACCAAAACAGTGCC
Position: -159
Score: 4.5 Sequence: TGCCTCACTTTGGTGCA
Locus tag: Ent638_1298
Name: glnH Funciton: Glutamine ABC transporter, substrate-binding component
Locus tag: Ent638_1297
Name: glnP Funciton: Glutamine ABC transporter, transmembrane component
Locus tag: Ent638_1296
Name: glnQ Funciton: Glutamine ABC transporter, ATP-binding component |
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glnH
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Glutamine ABC transporter, substrate-binding component
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glnP
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Glutamine ABC transporter, transmembrane component
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glnQ
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Glutamine ABC transporter, ATP-binding component
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Position: -206
Score: 4.8 Sequence: TGCACGATTCTGGTGCA
Locus tag: Ent638_2564
Name: nac Funciton: Nitrogen assimilation transcriptional regulator, LysR family |
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nac
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Nitrogen assimilation transcriptional regulator, LysR family
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Position: -53
Score: 4.8 Sequence: CGCACCGAAAGGGTGCG
Locus tag: Ent638_1369
Name: potG Funciton: Putrescine ABC transporter, ATP-binding component
Locus tag: Ent638_1370
Name: potH Funciton: Putrescine ABC transporter, transmembrane component 2
Locus tag: Ent638_1371
Name: potI Funciton: Putrescine ABC transporter, transmembrane component 1 |
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potG
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Putrescine ABC transporter, ATP-binding component
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potH
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Putrescine ABC transporter, transmembrane component 2
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potI
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Putrescine ABC transporter, transmembrane component 1
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Position: -215
Score: 5 Sequence: TGCACTACTACAGTGCA
Locus tag: Ent638_3528
Name: ygjG Funciton: Putrescine aminotransferase (EC 2.6.1.82) |
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ygjG
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Putrescine aminotransferase (EC 2.6.1.82)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |