Regulon of NtrC in Yersinia pestis KIM

Properties
Regulator type:	Transcription factor
TF locus tag:	y3806
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Enterobacteriales
Statistics of regulated genes:
- Genes	22
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -29 Score: 5.3 Sequence: TGCACCGAAACTGTGCA Locus tag: y3805 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: y3806 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	y3805	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	y3806	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -384 Score: 5.6 Sequence: TGCACCAAAATAGTGCC Position: -353 Score: 5.5 Sequence: GGCACCAAAATAGTGCA Locus tag: y3804 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	y3804	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -382 Score: 3.6 Sequence: TGTACATTTGTAGTGCA Locus tag: y2349 Name: astC Funciton: Succinylornithine transaminase (EC 2.6.1.81) Locus tag: y2348 Name: astA Funciton: Arginine N-succinyltransferase (EC 2.3.1.109) Locus tag: y2347 Name: astD Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) Locus tag: y2346 Name: astB Funciton: Succinylarginine dihydrolase (EC 3.5.3.23) Locus tag: y2345 Name: astE Funciton: Succinylglutamate desuccinylase (EC 3.5.1.96)
	y2349	astC	Succinylornithine transaminase (EC 2.6.1.81)
	y2348	astA	Arginine N-succinyltransferase (EC 2.3.1.109)
	y2347	astD	Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
	y2346	astB	Succinylarginine dihydrolase (EC 3.5.3.23)
	y2345	astE	Succinylglutamate desuccinylase (EC 3.5.1.96)
Position: -191 Score: 5.8 Sequence: TGCACCAACTTGGTGCG Locus tag: y1041 Name: glnK Funciton: nitrogen regulatory protein P-II Locus tag: y1042 Name: amtB Funciton: Ammonium transporter
	y1041	glnK	nitrogen regulatory protein P-II
	y1042	amtB	Ammonium transporter
Position: -278 Score: 4.2 Sequence: TGCCTCTATTTGGTGCG Locus tag: y1189 Name: gltI Funciton: Glutamate-aspartate ABC transporter, substrate-binding component Locus tag: y1188 Name: gltJ Funciton: Glutamate-aspartate ABC transporter, transmembrane component 1 Locus tag: y1187 Name: gltK Funciton: Glutamate-aspartate ABC transporter, transmembrane component 2 Locus tag: y1186 Name: gltL Funciton: Glutamate-aspartate ABC transporter, ATP-binding component
	y1189	gltI	Glutamate-aspartate ABC transporter, substrate-binding component
	y1188	gltJ	Glutamate-aspartate ABC transporter, transmembrane component 1
	y1187	gltK	Glutamate-aspartate ABC transporter, transmembrane component 2
	y1186	gltL	Glutamate-aspartate ABC transporter, ATP-binding component
Position: -123 Score: 4.8 Sequence: AGCACTGAAATGGGGCA Locus tag: y1607 Name: hisJ Funciton: Histidine ABC transporter, substrate-binding component Locus tag: y1608 Name: hisQ Funciton: Histidine ABC transporter, transmembrane component 1 Locus tag: y1609 Name: hisM Funciton: Histidine ABC transporter, transmembrane component 2 Locus tag: y1610 Name: hisP Funciton: Histidine ABC transporter, ATP-binding component
	y1607	hisJ	Histidine ABC transporter, substrate-binding component
	y1608	hisQ	Histidine ABC transporter, transmembrane component 1
	y1609	hisM	Histidine ABC transporter, transmembrane component 2
	y1610	hisP	Histidine ABC transporter, ATP-binding component
Position: -205 Score: 5.5 Sequence: TGCACCTAAATGGTGCG Locus tag: y0932 Name: EAM_0872 Funciton: Predicted ABC transporter, substrate-binding component Locus tag: y0933 Name: EAM_0873 Funciton: Predicted ABC transporter, permease component 1 Locus tag: y0934 Name: EAM_0874 Funciton: Predicted ABC transporter, permease component 2 Locus tag: y0935 Name: EAM_0875 Funciton: Predicted ABC transporter, ATP-binding component
	y0932	EAM_0872	Predicted ABC transporter, substrate-binding component
	y0933	EAM_0873	Predicted ABC transporter, permease component 1
	y0934	EAM_0874	Predicted ABC transporter, permease component 2
	y0935	EAM_0875	Predicted ABC transporter, ATP-binding component

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Yersinia pestis KIM

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --