Regulons of Ralstonia metallidurans CH34



Type	Regulator	Effector	Pathway	Genes	Sites
TF	Dnr	Nitric oxide	Denitrification	2	2
TF	FadP		Fatty acid degradation	13	13
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	15	17
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	2	2
TF	HrcA	Heat shock	Heat shock response	2	2
TF	HutC	cis-Urocanic acid	Histidine utilization	3	4
TF	HypR	Proline; 4-hydroxyproline	Proline and 4-hydrohyproline utilization	2	4
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	9	10
TF	LiuQ		Branched-chain amino acid degradation	2	4
TF	LiuR		Branched-chain amino acid degradation	5	8
TF	LldR	L-lactate	Lactate utilization	2	2
TF	ModE	Molybdate	Molybdenum homeostasis	2	2
TF	NorR	Nitric oxide	Nitrosative stress response	2	3
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	2
TF	NsrR	Nitric oxide	Nitrosative stress response	4	6
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	6
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	3	3
TF	PhnF		Phosphonate utilization	2	2
TF	RutR	Uracil	Pyrimidine utilization	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	3	4

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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