Propagation of NsrR regulog to Ralstonia metallidurans CH34
| Source regulog: | NsrR - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Ralstonia metallidurans CH34 |
| Orthologous TF(s) | Rmet_3383 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 32
Score: 6 Sequence: CATGCATTTTACATGCATG
Locus tag: Rmet_3382
|
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| Rmet_3382 | 32 | 6 | CATGCATTTTACATGCATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmp | ||||
| Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) | ||||
| Ralstonia eutropha H16 | H16_A3533 | -41 | 5.6 | CATGCATTTAATTTGCATG |
| Cupriavidus taiwanensis | RALTA_A2986 | -40 | 4.6 | CATGCATATTTTCTGCATG |
| Ralstonia metallidurans CH34 | Rmet_3382 | 32 | 6 | CATGCATTTTACATGCATG |
| Ralstonia eutropha JMP134 | Reut_A3219 | -41 | 5.5 | CATGCATTTTGTTTGCATG |
| Ralstonia solanacearum GMI1000 | RS01706 | -133 | 4.3 | GTGGTATTTAATATGCATG |
| Ralstonia pickettii 12J | Rpic_3609 | -32 | 3.6 | GTTGCATATTTCACGCATA |
|
Position: -25
Score: 5.5 Sequence: CTTGCATTGGCGATGCACG
Locus tag: Rmet_3383
|
||||
| Rmet_3383 | -25 | 5.5 | CTTGCATTGGCGATGCACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nsrR | ||||
| Ortholog function: Nitrite-sensitive transcriptional repressor NsrR | ||||
| Ralstonia eutropha H16 | H16_A3534 | -39 | 5.3 | CTTGCATCCTGGATGCATC |
| Cupriavidus taiwanensis | RALTA_A2987 | -40 | 5.5 | CTTGCATCCTAGATGCATC |
| Ralstonia metallidurans CH34 | Rmet_3383 | -25 | 5.5 | CTTGCATTGGCGATGCACG |
| Ralstonia eutropha JMP134 | Reut_A3220 | -39 | 4.6 | CTTGCATTTGAAATGCCGC |
|
Position: -53
Score: 5.6 Sequence: GATGCAATTTAAATGCATC
Locus tag: Rmet_4922
|
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| Rmet_4922 | -53 | 5.6 | GATGCAATTTAAATGCATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: PF10006 | ||||
| Ortholog function: hypothetical protein, PF10006 | ||||
| Ralstonia metallidurans CH34 | Rmet_4922 | -53 | 5.6 | GATGCAATTTAAATGCATC |
| Ralstonia solanacearum GMI1000 | RS03037 | -103 | 3.7 | CAAGTATCTGATATACATC |
| -53 | 5.8 | GATGCATTCTCAATGCATC | ||
| Ralstonia pickettii 12J | Rpic_4014 | -101 | 4.3 | CAAGCATCTGATATACATC |
| -51 | 5 | GTTGCATCCTTAATGCATC | ||
|
Position: -62
Score: 5.6 Sequence: ATTGCATTTAAGATGCATG
Locus tag: Rmet_5307
|
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| Rmet_5307 | -62 | 5.6 | ATTGCATTTAAGATGCATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nnrS | ||||
| Ortholog function: NnrS protein involved in response to NO | ||||
| Ralstonia metallidurans CH34 | Rmet_5307 | -62 | 5.6 | ATTGCATTTAAGATGCATG |
| Ralstonia solanacearum GMI1000 | RS01707 | -133 | 4.3 | GTGGTATTTAATATGCATG |
| Ralstonia pickettii 12J | Rpic_3610 | -32 | 3.6 | GTTGCATATTTCACGCATA |