Propagation of Fur regulog to Ralstonia metallidurans CH34
| Source regulog: | Fur - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Ralstonia metallidurans CH34 |
| Orthologous TF(s) | Rmet_2976, Rmet_5746 |
| Regulated genes | 15 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -91
Score: 5.2 Sequence: AATGGGAATTGTTATCATT
Locus tag: Rmet_0247
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| Rmet_0247 | -91 | 5.2 | AATGGGAATTGTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfd | ||||
| Ortholog function: Bacterioferritin-associated ferredoxin | ||||
| Ralstonia solanacearum GMI1000 | RSc0349 | -77 | 5 | AACAAGAATTGTTCTCATT |
| Ralstonia pickettii 12J | Rpic_0205 | -75 | 5 | AACAAGAATTGTTCTCATT |
| Ralstonia metallidurans CH34 | Rmet_0247 | -91 | 5.2 | AATGGGAATTGTTATCATT |
| Ralstonia eutropha JMP134 | Reut_A0298 | -1 | 5.2 | AAtGggAATTgTTATCaTT |
| Ralstonia eutropha H16 | H16_A0327 | -89 | 5.2 | AATGGGAATTGTTATCATT |
| Cupriavidus taiwanensis | RALTA_A0266 | -56 | 5.2 | AATGGGAATTGTTATCATT |
|
Position: -120
Score: 5 Sequence: ATTGATACTCATTATCATT
Locus tag: Rmet_0720
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| Rmet_0720 | -120 | 5 | ATTGATACTCATTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A0796 | ||||
| Ortholog function: putative exported protein | ||||
| Ralstonia metallidurans CH34 | Rmet_0720 | -120 | 5 | ATTGATACTCATTATCATT |
| Ralstonia eutropha JMP134 | Reut_A2571 | -90 | 5.2 | ATTGCGAATCATTATCATT |
| Ralstonia eutropha H16 | H16_A0796 | -87 | 5.5 | ATTGAGAATCATTATTATT |
| Cupriavidus taiwanensis | RALTA_A0777 | -84 | 5.6 | ATTGAGAATCATTATCATT |
|
Position: -302
Score: 4.7 Sequence: AATGCGAATAATTTACATT
Locus tag: Rmet_0837
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| Rmet_0837 | -302 | 4.7 | AATGCGAATAATTTACATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Rmet_0837 | ||||
| Ortholog function: TonB-dependent siderophore transporter | ||||
| Ralstonia metallidurans CH34 | Rmet_0837 | -302 | 4.7 | AATGCGAATAATTTACATT |
|
Position: -167
Score: 4.8 Sequence: AATGCAAATGATTAGTATT
Locus tag: Rmet_1105
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| Rmet_1105 | -167 | 4.8 | AATGCAAATGATTAGTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_B0117 | ||||
| Ortholog function: putative component of iron permease | ||||
| Ralstonia metallidurans CH34 | Rmet_1105 | -167 | 4.8 | AATGCAAATGATTAGTATT |
|
Position: -56
Score: 4.6 Sequence: AATGATAATAGGTCGCATT
Locus tag: Rmet_1120
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| Rmet_1120 | -56 | 4.6 | AATGATAATAGGTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecI | ||||
| Ortholog function: Probable RNA polymerase sigma factor FecI | ||||
| Ralstonia metallidurans CH34 | Rmet_1120 | -56 | 4.6 | AATGATAATAGGTCGCATT |
|
Position: -78
Score: 5.3 Sequence: AATACGAATCATTATTATT
Locus tag: Rmet_1367
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| Rmet_1367 | -78 | 5.3 | AATACGAATCATTATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_A1451 | ||||
| Ortholog function: putative transmembrane lipoprotein | ||||
| Ralstonia metallidurans CH34 | Rmet_1367 | -78 | 5.3 | AATACGAATCATTATTATT |
| Ralstonia eutropha H16 | H16_A1451 | -46 | 5 | AATGCGAATCATTACCATT |
| Cupriavidus taiwanensis | RALTA_A1365 | -46 | 5.4 | AATGCGAATCATTATTATT |
|
Position: -54
Score: 4.6 Sequence: AATACGAATTGTTCGTATT
Locus tag: Rmet_1819
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| Rmet_1819 | -54 | 4.6 | AATACGAATTGTTCGTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: h16_B2476 | ||||
| Ortholog function: Putative TonB-dependent siderophore transporter | ||||
| Ralstonia metallidurans CH34 | Rmet_1819 | -54 | 4.6 | AATACGAATTGTTCGTATT |
| Ralstonia eutropha H16 | H16_B2476 | -73 | 5 | AATGCGAATTATTCGCATT |
| Cupriavidus taiwanensis | RALTA_B2199 | -67 | 5 | AATGCGAATTATTCGCATT |
|
Position: -73
Score: 5.6 Sequence: AATGATAACAATTCTCATT
Locus tag: Rmet_2280
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| Rmet_2280 | -73 | 5.6 | AATGATAACAATTCTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemP | ||||
| Ortholog function: hemin uptake protein | ||||
| Ralstonia metallidurans CH34 | Rmet_2280 | -73 | 5.6 | AATGATAACAATTCTCATT |
| Ralstonia eutropha JMP134 | Reut_A2238 | -107 | 5.1 | AATGGTAATGGTTCTCATT |
| Ralstonia eutropha H16 | H16_A2535 | -81 | 5.6 | AATGATAACAATTCTCATT |
| Cupriavidus taiwanensis | RALTA_A2040 | -108 | 5.6 | AATGATAACAATTCTCATT |
|
Position: -42
Score: 4.2 Sequence: AACGCGAATCGTTCGCATT
Locus tag: Rmet_3077
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| Rmet_3077 | -42 | 4.2 | AACGCGAATCGTTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Reut_A2876 | ||||
| Ortholog function: putative TonB-dependent siderophore transporter | ||||
| Ralstonia pickettii 12J | Rpic_3802 | -136 | 4.8 | ATTGAGAATCGTTGTCATT |
| Ralstonia metallidurans CH34 | Rmet_3077 | -42 | 4.2 | AACGCGAATCGTTCGCATT |
| Ralstonia eutropha JMP134 | Reut_A2876 | -136 | 4.4 | AACGCAAATCATTCGCATT |
|
Position: -56
Score: 4.4 Sequence: AATTACAATCATTCGCATT
Locus tag: pMOL30_093
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| pMOL30_093 | -56 | 4.4 | AATTACAATCATTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftr1 | ||||
| Ortholog function: iron permease FTR1 | ||||
| Ralstonia pickettii 12J | Rpic_1641 | -55 | 4.8 | AATTACAATCATTCTCATT |
| Ralstonia pickettii 12J | Rpic_1817 | -55 | 4.8 | AATTACAATCATTCTCATT |
| Ralstonia metallidurans CH34 | pMOL30_093 | -56 | 4.4 | AATTACAATCATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5945 | -62 | 4.2 | AAATAGAATTACAATCATT |
| -56 | 4.4 | AATTACAATCATTCGCATT | ||
|
Position: -56
Score: 4.4 Sequence: AATTACAATCATTCGCATT
Locus tag: Rmet_5945
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| Rmet_5945 | -56 | 4.4 | AATTACAATCATTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftr1 | ||||
| Ortholog function: iron permease FTR1 | ||||
| Ralstonia pickettii 12J | Rpic_1641 | -55 | 4.8 | AATTACAATCATTCTCATT |
| Ralstonia pickettii 12J | Rpic_1817 | -55 | 4.8 | AATTACAATCATTCTCATT |
| Ralstonia metallidurans CH34 | pMOL30_093 | -56 | 4.4 | AATTACAATCATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5945 | -62 | 4.2 | AAATAGAATTACAATCATT |
| -56 | 4.4 | AATTACAATCATTCGCATT | ||
|
Position: -82
Score: 4.2 Sequence: ATCGAGAACGATTTCTATT
Locus tag: Rmet_5891
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| Rmet_5891 | -82 | 4.2 | ATCGAGAACGATTTCTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: Ferrous iron transport protein A | ||||
| Ralstonia solanacearum GMI1000 | RS03714 | -66 | 4.9 | AATGAAAACGATTCGCATT |
| Ralstonia pickettii 12J | Rpic_3949 | -61 | 4.9 | AATGAAAACGATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5891 | -82 | 4.2 | ATCGAGAACGATTTCTATT |
| Ralstonia eutropha JMP134 | Reut_B5430 | -80 | 5.2 | AATGAAAACGATTTTCATT |
| Ralstonia eutropha H16 | H16_B0085 | -80 | 5.2 | AATGAAAACGATTTTCATT |
| Cupriavidus taiwanensis | RALTA_B0077 | -83 | 5.2 | AATGAAAACGATTTTCATT |
|
Position: -66
Score: 5.1 Sequence: AATACGAATCGTTATCATT
Locus tag: Rmet_5373
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| Rmet_5373 | -66 | 5.1 | AATACGAATCGTTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: RSp0244 | ||||
| Ortholog function: TonB-dependent outer-membrane hemin transporter | ||||
| Ralstonia metallidurans CH34 | Rmet_5373 | -66 | 5.1 | AATACGAATCGTTATCATT |
|
Position: -66
Score: 4.7 Sequence: AATGCGAACCATTCGCATT
Locus tag: Rmet_5806
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| Rmet_5806 | -66 | 4.7 | AATGCGAACCATTCGCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecA | ||||
| Ortholog function: TonB-dependent outer membrane transporter for Fe(III)-dicitrate | ||||
| Ralstonia metallidurans CH34 | Rmet_5806 | -66 | 4.7 | AATGCGAACCATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5807 | -107 | 4.6 | ATTGCAAATCATTCCTATT |
| Cupriavidus taiwanensis | RALTA_B2301 | -101 | 4.2 | TTTGAGAATCACTCGCATT |
|
Position: -107
Score: 4.6 Sequence: ATTGCAAATCATTCCTATT
Locus tag: Rmet_5807
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| Rmet_5807 | -107 | 4.6 | ATTGCAAATCATTCCTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecA | ||||
| Ortholog function: TonB-dependent outer membrane transporter for Fe(III)-dicitrate | ||||
| Ralstonia metallidurans CH34 | Rmet_5806 | -66 | 4.7 | AATGCGAACCATTCGCATT |
| Ralstonia metallidurans CH34 | Rmet_5807 | -107 | 4.6 | ATTGCAAATCATTCCTATT |
| Cupriavidus taiwanensis | RALTA_B2301 | -101 | 4.2 | TTTGAGAATCACTCGCATT |