Regulog Fur - Ralstonia

Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
Genome | Genes | Operons |
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Ralstonia solanacearum GMI1000 | 27 | 14 |
Ralstonia pickettii 12J | 18 | 10 |
Ralstonia metallidurans CH34 | 37 | 18 |
Ralstonia eutropha JMP134 | 17 | 11 |
Ralstonia eutropha H16 | 35 | 19 |
Cupriavidus taiwanensis | 25 | 16 |
Genes | Function | ||||||
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CRON 1. | |||||||
ftr1 |
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*2
Ralstonia pickettii 12J Site: position = -55 score = 4.81483 sequence = AATTACAATCATTCTCATT Gene: Rpic_1817: iron permease FTR1 Site: position = -55 score = 4.81483 sequence = AATTACAATCATTCTCATT Gene: Rpic_1641: iron permease FTR1 |
*2
Ralstonia metallidurans CH34 Site: position = -56 score = 4.42287 sequence = AATTACAATCATTCGCATT Gene: pMOL30_093: iron permease FTR1 Site: position = -62 score = 4.17614 sequence = AAATAGAATTACAATCATT Site: position = -56 score = 4.42287 sequence = AATTACAATCATTCGCATT Gene: Rmet_5945: iron permease FTR1 |
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iron permease FTR1 |
CRON 2. | |||||||
Reut_B4646 |
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*
Ralstonia eutropha JMP134 Site: position = -72 score = 4.79481 sequence = AACAATAACCGTTATCATT Gene: Reut_B4646: TonB-dependent siderophore transporter |
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TonB-dependent siderophore transporter |
CRON 3. | |||||||
Reut_A2876 |
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*
Ralstonia pickettii 12J Site: position = -136 score = 4.82237 sequence = ATTGAGAATCGTTGTCATT Gene: Rpic_3802: putative TonB-dependent siderophore transporter |
*
Ralstonia metallidurans CH34 Site: position = -42 score = 4.22873 sequence = AACGCGAATCGTTCGCATT Gene: Rmet_3077: putative TonB-dependent siderophore transporter |
*
Ralstonia eutropha JMP134 Site: position = -136 score = 4.3663 sequence = AACGCAAATCATTCGCATT Gene: Reut_A2876: putative TonB-dependent siderophore transporter |
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putative TonB-dependent siderophore transporter |
Reut_A2877 |
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Gene: Rpic_3803: 2OG-Fe(II) oxygenase |
Gene: Rmet_3078: 2OG-Fe(II) oxygenase |
Gene: Reut_A2877: 2OG-Fe(II) oxygenase |
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2OG-Fe(II) oxygenase |
CRON 4. | |||||||
Rmet_1104 |
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*
Ralstonia metallidurans CH34 Site: position = -317 score = 4.69597 sequence = TATGATAATGGTTTGCATT Site: position = -99 score = 4.83622 sequence = AATACTAATCATTTGCATT Gene: Rmet_1104: TonB-dependent siderophore transporter |
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TonB-dependent siderophore transporter |
CRON 5. | |||||||
mbtH |
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*
Ralstonia eutropha H16 Site: position = -118 score = 5.22818 sequence = AATACAAATCATTATCATT Gene: H16_B1689: Siderophore biosynthesis protein |
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Siderophore biosynthesis protein |
CRON 6. | |||||||
h16_B1688 |
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*
Ralstonia eutropha H16 Site: position = -170 score = 5.22818 sequence = AATGATAATGATTTGTATT Gene: H16_B1688: pyoverdine biosynthesis regulatory gene |
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pyoverdine biosynthesis regulatory gene |
CRON 7. | |||||||
hemP |
*
Ralstonia solanacearum GMI1000 Site: position = -82 score = 5.53258 sequence = AATGATAACGATTCTCATT Gene: RSc1966: putative hemin uptake protein |
*
Ralstonia pickettii 12J Site: position = -70 score = 5.5791 sequence = AATGATAACTATTCTCATT Gene: Rpic_2119: putative hemin uptake protein |
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putative hemin uptake protein |
CRON 8. | |||||||
RSp0244 |
*
Ralstonia solanacearum GMI1000 Site: position = -223 score = 5.54452 sequence = ATTGATAATGATTCTTATT Site: position = -217 score = 4.10063 sequence = AATGATTCTTATTTGCATT Gene: RS03722: TonB-dependent outer-membrane hemin transporter |
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*
Ralstonia metallidurans CH34 Site: position = -66 score = 5.09061 sequence = AATACGAATCGTTATCATT Gene: Rmet_5373: TonB-dependent outer-membrane hemin transporter |
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TonB-dependent outer-membrane hemin transporter |
Rmet_5374 |
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Gene: Rmet_5374: hypothetical protein |
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hypothetical protein |
hmuS |
Gene: RS03723: hemin transport protein HmuS; putative Hemin-degrading |
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Gene: Rmet_5375: hemin transport protein HmuS; putative Hemin-degrading |
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hemin transport protein HmuS; putative Hemin-degrading |
hmuT |
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Gene: Rmet_5376: hemin-binding periplasmic protein HmuT |
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hemin-binding periplasmic protein HmuT |
hmuU |
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Gene: Rmet_5377: hemin ABC-transport system permease |
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hemin ABC-transport system permease |
hmuV |
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Gene: Rmet_5378: hemin importer ATP-binding subunit |
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hemin importer ATP-binding subunit |
CRON 9. | |||||||
DUF337-3 |
*
Ralstonia solanacearum GMI1000 Site: position = -81 score = 5.29595 sequence = AACGAGAATCATTCTCATT Gene: RS00511: Uncharacterized iron-regulated membrane protein, DUF337 family |
*
Ralstonia pickettii 12J Site: position = -75 score = 4.71168 sequence = AACGAGAATCATTCTCATC Gene: Rpic_3345: Uncharacterized iron-regulated membrane protein, DUF337 family |
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Uncharacterized iron-regulated membrane protein, DUF337 family |
CRON 10. | |||||||
fhuA3 |
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*
Ralstonia eutropha H16 Site: position = -223 score = 4.88712 sequence = AATACAAACCATTCTCATT Gene: H16_B1976: TonB-dependent siderophore transporter, hydroxamate-type |
*
Cupriavidus taiwanensis Site: position = -57 score = 5.29246 sequence = AACAAGAATTATTCTCATT Gene: RALTA_B1494: TonB-dependent siderophore transporter, hydroxamate-type |
TonB-dependent siderophore transporter, hydroxamate-type |
CRON 11. | |||||||
Reut_B4659 |
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*
Ralstonia pickettii 12J Site: position = -65 score = 5.11691 sequence = AACGATAACAATTCTCATT Gene: Rpic_0101: TonB-dependent siderophore transporter |
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*
Ralstonia eutropha JMP134 Site: position = -180 score = 4.65285 sequence = ATTACGAATGATTCGTATT Gene: Reut_B4659: TonB-dependent siderophore transporter |
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TonB-dependent siderophore transporter |
Rpic_0100 |
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Gene: Rpic_0100: Sel1 domain protein repeat-containing protein |
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Sel1 domain protein repeat-containing protein |
Reut_B4660 |
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Gene: Rpic_0099: 2OG-Fe(II) oxygenase |
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*
Ralstonia eutropha JMP134 Site: position = -81 score = 4.34305 sequence = ACTGATAATGATTCCTGTT Gene: Reut_B4660: 2OG-Fe(II) oxygenase |
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2OG-Fe(II) oxygenase |
CRON 12. | |||||||
fepA |
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*
Ralstonia eutropha H16 Site: position = -129 score = 4.97811 sequence = TATGAGAATGATTGTTATT Gene: H16_B2095: TonB-dependent outer membrane iron transport protein |
*
Cupriavidus taiwanensis Site: position = -153 score = 4.97811 sequence = TATGAGAATGATTGTTATT Gene: RALTA_B1811: TonB-dependent outer membrane iron transport protein |
TonB-dependent outer membrane iron transport protein |
CRON 13. | |||||||
RSc1807 |
*
Ralstonia solanacearum GMI1000 Site: position = -126 score = 5.59454 sequence = AATGAGAATGATTATCAAT Gene: RS04230: Probable iron-regulated TonB-dependent transporter |
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Probable iron-regulated TonB-dependent transporter |
RSc1808 |
Gene: RS04232: Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein |
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Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein |
RSc1809 |
Gene: RS04233: Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein |
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Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein |
CRON 14. | |||||||
RSc2918 |
*
Ralstonia solanacearum GMI1000 Site: position = -56 score = 5.37828 sequence = AATAAGAATTCTTCTCATT Gene: RS00176: Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein |
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Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein |
RSc2919 |
Gene: RS00175: Putative iron transport-sensory transduction transmembrane protein |
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Putative iron transport-sensory transduction transmembrane protein |
RSc2920 |
Gene: RS00173: Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein, hydroxamate-type |
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Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein, hydroxamate-type |
CRON 15. | |||||||
RSc1811 |
*
Ralstonia solanacearum GMI1000 Site: position = -33 score = 5.02813 sequence = AATGAGAATCATTTTCATC Gene: RS04237: Putative siderophore synthetase protein |
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Putative siderophore synthetase protein |
CRON 16. | |||||||
h16_A0796 |
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*
Ralstonia metallidurans CH34 Site: position = -120 score = 5.04024 sequence = ATTGATACTCATTATCATT Gene: Rmet_0720: putative exported protein |
*
Ralstonia eutropha JMP134 Site: position = -90 score = 5.20258 sequence = ATTGCGAATCATTATCATT Gene: Reut_A2571: putative exported protein |
*
Ralstonia eutropha H16 Site: position = -87 score = 5.54452 sequence = ATTGAGAATCATTATTATT Gene: H16_A0796: putative exported protein |
*
Cupriavidus taiwanensis Site: position = -84 score = 5.59454 sequence = ATTGAGAATCATTATCATT Gene: RALTA_A0777: putative exported protein |
putative exported protein |
CRON 17. | |||||||
h16_A3182 |
*
Ralstonia solanacearum GMI1000 Site: position = -153 score = 5.12939 sequence = AATGGGAATTGTTCTCATT Gene: RS02469: putative iron-regulated TonB-dependent transporter |
*
Ralstonia pickettii 12J Site: position = -100 score = 5.07938 sequence = AATAGGAATTGTTCTCATT Gene: Rpic_4266: putative iron-regulated TonB-dependent transporter |
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*
Ralstonia eutropha JMP134 Site: position = -51 score = 5.04757 sequence = AATGATAATGCTTCGCATT Gene: Reut_A2878: putative iron-regulated TonB-dependent transporter |
*
Ralstonia eutropha H16 Site: position = -153 score = 4.74939 sequence = AATAGGAATAATTCGCAAT Gene: H16_A3182: putative iron-regulated TonB-dependent transporter |
*
Cupriavidus taiwanensis Site: position = -92 score = 4.74939 sequence = AATAGGAATAATTCGCAAT Gene: RALTA_A2655: putative iron-regulated TonB-dependent transporter |
putative iron-regulated TonB-dependent transporter |
CRON 18. | |||||||
bfd |
*
Ralstonia solanacearum GMI1000 Site: position = -77 score = 5.00914 sequence = AACAAGAATTGTTCTCATT Gene: RSc0349: Bacterioferritin-associated ferredoxin |
*
Ralstonia pickettii 12J Site: position = -75 score = 5.00914 sequence = AACAAGAATTGTTCTCATT Gene: Rpic_0205: Bacterioferritin-associated ferredoxin |
*
Ralstonia metallidurans CH34 Site: position = -91 score = 5.18714 sequence = AATGGGAATTGTTATCATT Gene: Rmet_0247: Bacterioferritin-associated ferredoxin |
*
Ralstonia eutropha JMP134 Site: position = -1 score = 5.18714 sequence = AAtGggAATTgTTATCaTT Gene: Reut_A0298: Bacterioferritin-associated ferredoxin |
*
Ralstonia eutropha H16 Site: position = -89 score = 5.18714 sequence = AATGGGAATTGTTATCATT Gene: H16_A0327: Bacterioferritin-associated ferredoxin |
*
Cupriavidus taiwanensis Site: position = -56 score = 5.18714 sequence = AATGGGAATTGTTATCATT Gene: RALTA_A0266: Bacterioferritin-associated ferredoxin |
Bacterioferritin-associated ferredoxin |
bfr |
Gene: RSc0350: Bacterioferritin |
Gene: Rpic_0206: Bacterioferritin |
Gene: Rmet_0248: Bacterioferritin |
Gene: Reut_A0299: Bacterioferritin |
Gene: H16_A0328: Bacterioferritin |
Gene: RALTA_A0267: Bacterioferritin |
Bacterioferritin |
CRON 19. | |||||||
feoA |
*
Ralstonia solanacearum GMI1000 Site: position = -66 score = 4.93713 sequence = AATGAAAACGATTCGCATT Gene: RS03714: Ferrous iron transport protein A |
*
Ralstonia pickettii 12J Site: position = -61 score = 4.93713 sequence = AATGAAAACGATTCGCATT Gene: Rpic_3949: Ferrous iron transport protein A |
*
Ralstonia metallidurans CH34 Site: position = -82 score = 4.20358 sequence = ATCGAGAACGATTTCTATT Gene: Rmet_5891: Ferrous iron transport protein A |
*
Ralstonia eutropha JMP134 Site: position = -80 score = 5.18334 sequence = AATGAAAACGATTTTCATT Gene: Reut_B5430: Ferrous iron transport protein A |
*
Ralstonia eutropha H16 Site: position = -80 score = 5.18334 sequence = AATGAAAACGATTTTCATT Gene: H16_B0085: Ferrous iron transport protein A |
*
Cupriavidus taiwanensis Site: position = -83 score = 5.18334 sequence = AATGAAAACGATTTTCATT Gene: RALTA_B0077: Ferrous iron transport protein A |
Ferrous iron transport protein A |
feoB |
Gene: RSp0251: Ferrous iron transport protein B |
Gene: Rpic_3948: Ferrous iron transport protein B |
Gene: Rmet_5890: Ferrous iron transport protein B |
Gene: Reut_B5429: Ferrous iron transport protein B |
Gene: H16_B0084: Ferrous iron transport protein B |
Gene: RALTA_B0076: Ferrous iron transport protein B |
Ferrous iron transport protein B |
feoX |
Gene: RS03716: putative transmembrane protein involved in ferrous iron transport |
Gene: Rpic_3947: putative transmembrane protein involved in ferrous iron transport |
Gene: Rmet_5889: putative transmembrane protein involved in ferrous iron transport |
Gene: Reut_B5428: putative transmembrane protein involved in ferrous iron transport |
Gene: H16_B0083: putative transmembrane protein involved in ferrous iron transport |
Gene: RALTA_B0075: putative transmembrane protein involved in ferrous iron transport |
putative transmembrane protein involved in ferrous iron transport |
CRON 20. | |||||||
tonB |
*
Ralstonia solanacearum GMI1000 Site: position = -287 score = 4.96174 sequence = AATGGGAATCATTATCGTT Gene: RSc1963: Component of outer membrane metal uptake system, TonB family |
*
Ralstonia pickettii 12J Site: position = -289 score = 4.91173 sequence = AATAGGAATCATTATCGTT Gene: Rpic_2116: Component of outer membrane metal uptake system, TonB family |
*
Ralstonia metallidurans CH34 Site: position = -208 score = 5.30368 sequence = AATAAGAATCATTATCGTT Gene: Rmet_2277: Component of outer membrane metal uptake system, TonB family |
*
Ralstonia eutropha JMP134 Site: position = -187 score = 5.30368 sequence = AATAAGAATCATTATCGTT Gene: Reut_A2235: Component of outer membrane metal uptake system, TonB family |
*
Ralstonia eutropha H16 Site: position = -208 score = 5.30368 sequence = AATAAGAATCATTATCGTT Gene: H16_A2532: Component of outer membrane metal uptake system, TonB family |
*
Cupriavidus taiwanensis Site: position = -206 score = 5.30368 sequence = AATAAGAATCATTATCGTT Gene: RALTA_A2036: Component of outer membrane metal uptake system, TonB family |
Component of outer membrane metal uptake system, TonB family |
exbB |
Gene: RSc1964: Component of outer membrane metal uptake system, ExbB family |
Gene: Rpic_2117: Component of outer membrane metal uptake system, ExbB family |
Gene: Rmet_2278: Component of outer membrane metal uptake system, ExbB family |
Gene: Reut_A2236: Component of outer membrane metal uptake system, ExbB family |
Gene: H16_A2533: Component of outer membrane metal uptake system, ExbB family |
Gene: RALTA_A2037: Component of outer membrane metal uptake system, ExbB family |
Component of outer membrane metal uptake system, ExbB family |
exbD |
Gene: RSc1965: Component of outer membrane metal uptake system, ExbD family |
Gene: Rpic_2118: Component of outer membrane metal uptake system, ExbD family |
Gene: Rmet_2279: Component of outer membrane metal uptake system, ExbD family |
Gene: Reut_A2237: Component of outer membrane metal uptake system, ExbD family |
Gene: H16_A2534: Component of outer membrane metal uptake system, ExbD family |
Gene: RALTA_A2038: Component of outer membrane metal uptake system, ExbD family |
Component of outer membrane metal uptake system, ExbD family |
CRON 21. | |||||||
h16_B2476 |
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*
Ralstonia metallidurans CH34 Site: position = -54 score = 4.63741 sequence = AATACGAATTGTTCGTATT Gene: Rmet_1819: Putative TonB-dependent siderophore transporter |
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*
Ralstonia eutropha H16 Site: position = -73 score = 5.02075 sequence = AATGCGAATTATTCGCATT Gene: H16_B2476: Putative TonB-dependent siderophore transporter |
*
Cupriavidus taiwanensis Site: position = -67 score = 5.02075 sequence = AATGCGAATTATTCGCATT Gene: RALTA_B2199: Putative TonB-dependent siderophore transporter |
Putative TonB-dependent siderophore transporter |
CRON 22. | |||||||
h16_B0117 |
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*
Ralstonia metallidurans CH34 Site: position = -167 score = 4.83622 sequence = AATGCAAATGATTAGTATT Gene: Rmet_1105: putative component of iron permease |
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*
Ralstonia eutropha H16 Site: position = -253 score = 4.47083 sequence = AATGGGAATCGATCTCATT Site: position = -159 score = 5.18714 sequence = AATGCGAATTGTTATCATT Gene: H16_B0117: putative component of iron permease |
*
Cupriavidus taiwanensis Site: position = -157 score = 5.18714 sequence = AATGCGAATTGTTATCATT Gene: RALTA_B0125: putative component of iron permease |
putative component of iron permease |
DUF337-1 |
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Gene: Rmet_1106: Uncharacterized iron-regulated membrane protein, DUF337 family |
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Gene: H16_B0118: Uncharacterized iron-regulated membrane protein, DUF337 family |
Gene: RALTA_B0126: Uncharacterized iron-regulated membrane protein, DUF337 family |
Uncharacterized iron-regulated membrane protein, DUF337 family |
h16_B0119 |
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Gene: Rmet_1107: putative iron uptake protein |
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Gene: H16_B0119: putative iron uptake protein |
Gene: RALTA_B0127: putative iron uptake protein |
putative iron uptake protein |
Rmet_1108 |
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Gene: Rmet_1108: putative TonB-dependent siderophore transporter |
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putative TonB-dependent siderophore transporter |
CRON 23. | |||||||
h16_A1451 |
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*
Ralstonia metallidurans CH34 Site: position = -78 score = 5.3239 sequence = AATACGAATCATTATTATT Gene: Rmet_1367: putative transmembrane lipoprotein |
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*
Ralstonia eutropha H16 Site: position = -46 score = 5.03198 sequence = AATGCGAATCATTACCATT Gene: H16_A1451: putative transmembrane lipoprotein |
*
Cupriavidus taiwanensis Site: position = -46 score = 5.37392 sequence = AATGCGAATCATTATTATT Gene: RALTA_A1365: putative transmembrane lipoprotein |
putative transmembrane lipoprotein |
CRON 24. | |||||||
ffcA2 |
*
Ralstonia solanacearum GMI1000 Site: position = -254 score = 5.02458 sequence = ATCAAGAATGATTCTCATT Site: position = -70 score = 5.58331 sequence = ATTGAGAATAATTCTCATT Gene: RS00871: putative iron-regulated TonB-dependent siderophore transporter |
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Gene: Rmet_4496: putative iron-regulated TonB-dependent siderophore transporter |
*
Ralstonia eutropha JMP134 Site: position = -108 score = 4.61831 sequence = CTTGATAATGATTCGCATT Gene: Reut_B3686: putative iron-regulated TonB-dependent siderophore transporter |
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putative iron-regulated TonB-dependent siderophore transporter |
CRON 25. | |||||||
h16_A1450 |
*
Ralstonia solanacearum GMI1000 Site: position = -48 score = 5.23162 sequence = AATGAGAATCATTATCATC Gene: RS02198: putative transmembrane lipoprotein |
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*
Ralstonia metallidurans CH34 Site: position = -347 score = 5.3239 sequence = AATACGAATCATTATTATT Gene: Rmet_1366: putative transmembrane lipoprotein |
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*
Ralstonia eutropha H16 Site: position = -330 score = 5.03198 sequence = AATGCGAATCATTACCATT Gene: H16_A1450: putative transmembrane lipoprotein |
*
Cupriavidus taiwanensis Site: position = -330 score = 5.37392 sequence = AATGCGAATCATTATTATT Gene: RALTA_A1364: putative transmembrane lipoprotein |
putative transmembrane lipoprotein |
h16_A1450 |
Gene: RS02199: hypothetical protein |
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hypothetical protein |
DUF337-2 |
Gene: RS02200: Uncharacterized iron-regulated membrane protein, DUF337 family |
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Gene: Rmet_1365: Uncharacterized iron-regulated membrane protein, DUF337 family |
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Gene: H16_A1449: Uncharacterized iron-regulated membrane protein, DUF337 family |
Gene: RALTA_A1363: Uncharacterized iron-regulated membrane protein, DUF337 family |
Uncharacterized iron-regulated membrane protein, DUF337 family |
CRON 26. | |||||||
fecI |
*
Ralstonia solanacearum GMI1000 Site: position = -237 score = 5.58331 sequence = AATGAGAATTATTCTCAAT Site: position = -53 score = 5.02458 sequence = AATGAGAATCATTCTTGAT Gene: RS00872: Probable RNA polymerase sigma factor FecI |
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*
Ralstonia metallidurans CH34 Site: position = -56 score = 4.5751 sequence = AATGATAATAGGTCGCATT Gene: Rmet_1120: Probable RNA polymerase sigma factor FecI |
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Probable RNA polymerase sigma factor FecI |
fecR |
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Gene: Rmet_1119: putative regulator of siderophore uptake FecR |
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putative regulator of siderophore uptake FecR |
aleB |
Gene: RS00873: putative iron-regulated TonB-dependent siderophore transporter |
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Gene: Rmet_1118: putative iron-regulated TonB-dependent siderophore transporter |
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*
Ralstonia eutropha H16 Site: position = -80 score = 4.80397 sequence = AATAGGAATCATTCTGATT Gene: H16_B1489: putative iron-regulated TonB-dependent siderophore transporter |
*
Cupriavidus taiwanensis Site: position = -70 score = 5.13235 sequence = ATCGAGAATCATTATCATT Gene: RALTA_B0897: putative iron-regulated TonB-dependent siderophore transporter |
putative iron-regulated TonB-dependent siderophore transporter |
CRON 27. | |||||||
hemP |
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*
Ralstonia metallidurans CH34 Site: position = -73 score = 5.5791 sequence = AATGATAACAATTCTCATT Gene: Rmet_2280: hemin uptake protein |
*
Ralstonia eutropha JMP134 Site: position = -107 score = 5.14062 sequence = AATGGTAATGGTTCTCATT Gene: Reut_A2238: hemin uptake protein |
*
Ralstonia eutropha H16 Site: position = -81 score = 5.5791 sequence = AATGATAACAATTCTCATT Gene: H16_A2535: hemin uptake protein |
*
Cupriavidus taiwanensis Site: position = -108 score = 5.5791 sequence = AATGATAACAATTCTCATT Gene: RALTA_A2040: hemin uptake protein |
hemin uptake protein |
CRON 28. | |||||||
fhuA2 |
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*
Cupriavidus taiwanensis Site: position = -62 score = 4.78933 sequence = AATGACAATGATTTGCATT Gene: RALTA_B1229: TonB-dependent siderophore transporter, hydroxamate-type |
TonB-dependent siderophore transporter, hydroxamate-type |
RALTA_B1230 |
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Gene: RALTA_B1230: conserved hypothetical protein; putative Membrane protein; DUF337,Uncharacterized iron-regulated membrane protein |
conserved hypothetical protein; putative Membrane protein; DUF337,Uncharacterized iron-regulated membrane protein |
CRON 29. | |||||||
fhuA1 |
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*
Ralstonia eutropha H16 Site: position = -84 score = 4.74939 sequence = ATTACGAATTATTCGCATT Gene: H16_B1100: TonB-dependent siderophore transporter, hydroxomate-type |
*
Cupriavidus taiwanensis Site: position = -84 score = 4.19066 sequence = ATCACGAATCATTCCTATT Gene: RALTA_B0923: TonB-dependent siderophore transporter, hydroxomate-type |
TonB-dependent siderophore transporter, hydroxomate-type |
CRON 30. | |||||||
fecA |
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*2
Ralstonia metallidurans CH34 Site: position = -107 score = 4.55712 sequence = ATTGCAAATCATTCCTATT Gene: Rmet_5807: TonB-dependent outer membrane transporter for Fe(III)-dicitrate Site: position = -66 score = 4.69092 sequence = AATGCGAACCATTCGCATT Gene: Rmet_5806: TonB-dependent outer membrane transporter for Fe(III)-dicitrate |
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Gene: H16_B2570: TonB-dependent outer membrane transporter for Fe(III)-dicitrate |
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Cupriavidus taiwanensis Site: position = -101 score = 4.23389 sequence = TTTGAGAATCACTCGCATT Gene: RALTA_B2301: TonB-dependent outer membrane transporter for Fe(III)-dicitrate |
TonB-dependent outer membrane transporter for Fe(III)-dicitrate |
CRON 31. | |||||||
Rmet_0837 |
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Ralstonia metallidurans CH34 Site: position = -302 score = 4.68269 sequence = AATGCGAATAATTTACATT Gene: Rmet_0837: TonB-dependent siderophore receptor |
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TonB-dependent siderophore transporter |
Rmet_0838 |
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Gene: Rmet_0838: 2OG-Fe(II) oxygenase |
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2OG-Fe(II) oxygenase |
Rmet_0839 |
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Gene: Rmet_0839: FMN-dependent alpha-hydroxy acid dehydrogenase |
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FMN-dependent alpha-hydroxy acid dehydrogenase |
CRON 32. | |||||||
h16_B1683 |
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Ralstonia eutropha H16 Site: position = -195 score = 4.66294 sequence = AATGAGAATGATTATCAGG Gene: H16_B1683: Non-ribosomal peptide synthetase modules and related proteins |
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Non-ribosomal peptide synthetase modules and related proteins |
h16_B1682 |
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Gene: H16_B1682: ABC-type transporter, ATPase and permease components: Pep3E family |
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ABC-type transporter, ATPase and permease components: Pep3E family |
iucB |
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Gene: H16_B1681: siderophore biosynthesis related protein/Acetyltransferase or N-acetylase of ribosomal proteins (CO |
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siderophore biosynthesis protein, putative acetyltransferase |
pvdA |
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Gene: H16_B1680: Lysine/ornithine N-monooxygenase |
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Lysine/ornithine N-monooxygenase |
fhuE |
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Gene: H16_B1679: outer membrane receptor, TonB dependent |
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outer membrane receptor, TonB dependent |
h16_B1678 |
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Gene: H16_B1678: hypothetical protein |
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hypothetical protein |
h16_B1677 |
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Gene: H16_B1677: iron regulated protein |
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iron regulated protein |
h16_B1676 |
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Gene: H16_B1676: hypothetical membrane spanning protein |
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hypothetical membrane spanning protein |
CRON 33. | |||||||
fhuF |
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Ralstonia eutropha H16 Site: position = -74 score = 4.66294 sequence = CCTGATAATCATTCTCATT Gene: H16_B1684: putative iron transport-related membrane protein |
Gene: RALTA_B1232: putative iron transport-related membrane protein |
putative iron transport-related membrane protein |
CRON 34. | |||||||
RSp0100 |
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Ralstonia solanacearum GMI1000 Site: position = -59 score = 4.63517 sequence = AGTGATAATCACTCTCATT Gene: RS03023: putative iron-regulated TonB-dependent transporter |
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putative iron-regulated TonB-dependent transporter |
CRON 35. | |||||||
fhuA4 |
Gene: RS00125: Putative ferrichrome-iron TonB-dependent transporter |
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Ralstonia eutropha H16 Site: position = -86 score = 4.59116 sequence = ATGAGAAATTATTATCATT Gene: H16_B0785: Putative ferrichrome-iron TonB-dependent transporter |
Gene: RALTA_B0619: Putative ferrichrome-iron TonB-dependent transporter |
Putative ferrichrome-iron TonB-dependent transporter |
h16_B0786 |
Gene: RS00126: hypothetical protein |
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Gene: H16_B0786: hypothetical protein |
Gene: RALTA_B0620: hypothetical protein |
hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |