Regulon of Fur in Ralstonia solanacearum GMI1000

Properties
Regulator type:	Transcription factor
TF locus tag:	RSp0247, RSc2747
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Ralstonia
Statistics of regulated genes:
- Genes	27
- Operons	14
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -59 Score: 4.6 Sequence: AGTGATAATCACTCTCATT Locus tag: RS03023 Name: RSp0100 Funciton: putative iron-regulated TonB-dependent transporter
	RS03023	RSp0100	putative iron-regulated TonB-dependent transporter
Position: -56 Score: 5.4 Sequence: AATAAGAATTCTTCTCATT Locus tag: RS00176 Name: RSc2918 Funciton: Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein Locus tag: RS00175 Name: RSc2919 Funciton: Putative iron transport-sensory transduction transmembrane protein Locus tag: RS00173 Name: RSc2920 Funciton: Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein, hydroxamate-type
	RS00176	RSc2918	Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein
	RS00175	RSc2919	Putative iron transport-sensory transduction transmembrane protein
	RS00173	RSc2920	Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein, hydroxamate-type
Position: -81 Score: 5.3 Sequence: AACGAGAATCATTCTCATT Locus tag: RS00511 Name: RSc3067 Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
	RS00511	RSc3067	Uncharacterized iron-regulated membrane protein, DUF337 family
Position: -223 Score: 5.5 Sequence: ATTGATAATGATTCTTATT Position: -217 Score: 4.1 Sequence: AATGATTCTTATTTGCATT Locus tag: RS03722 Name: RSp0244 Funciton: TonB-dependent outer-membrane hemin transporter Locus tag: RS03723 Name: RSp0243 Funciton: hemin transport protein HmuS; putative Hemin-degrading
	RS03722	RSp0244	TonB-dependent outer-membrane hemin transporter
	RS03723	RSp0243	hemin transport protein HmuS; putative Hemin-degrading
Position: -82 Score: 5.5 Sequence: AATGATAACGATTCTCATT Locus tag: RSc1966 Name: hemP Funciton: putative hemin uptake protein
	RSc1966	hemP	putative hemin uptake protein
Position: -33 Score: 5 Sequence: AATGAGAATCATTTTCATC Locus tag: RS04237 Name: RSc1811 Funciton: Putative siderophore synthetase protein
	RS04237	RSc1811	Putative siderophore synthetase protein
Position: -126 Score: 5.6 Sequence: AATGAGAATGATTATCAAT Locus tag: RS04230 Name: RSc1807 Funciton: Probable iron-regulated TonB-dependent transporter Locus tag: RS04232 Name: RSc1808 Funciton: Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein Locus tag: RS04233 Name: RSc1809 Funciton: Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein
	RS04230	RSc1807	Probable iron-regulated TonB-dependent transporter
	RS04232	RSc1808	Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein
	RS04233	RSc1809	Probable iron-regulated ABC transporter, composite ATP-binding transmembrane protein
Position: -77 Score: 5 Sequence: AACAAGAATTGTTCTCATT Locus tag: RSc0349 Name: bfd Funciton: Bacterioferritin-associated ferredoxin Locus tag: RSc0350 Name: bfr Funciton: Bacterioferritin
	RSc0349	bfd	Bacterioferritin-associated ferredoxin
	RSc0350	bfr	Bacterioferritin
Position: -254 Score: 5 Sequence: ATCAAGAATGATTCTCATT Position: -70 Score: 5.6 Sequence: ATTGAGAATAATTCTCATT Locus tag: RS00871 Name: RSp0414 Funciton: putative iron-regulated TonB-dependent siderophore transporter
	RS00871	RSp0414	putative iron-regulated TonB-dependent siderophore transporter
Position: -153 Score: 5.1 Sequence: AATGGGAATTGTTCTCATT Locus tag: RS02469 Name: RSp1062 Funciton: putative iron-regulated TonB-dependent transporter
	RS02469	RSp1062	putative iron-regulated TonB-dependent transporter
Position: -237 Score: 5.6 Sequence: AATGAGAATTATTCTCAAT Position: -53 Score: 5 Sequence: AATGAGAATCATTCTTGAT Locus tag: RS00872 Name: RSp0415 Funciton: Probable RNA polymerase sigma factor FecI Locus tag: RS00873 Name: RSp0416 Funciton: putative iron-regulated TonB-dependent siderophore transporter
	RS00872	RSp0415	Probable RNA polymerase sigma factor FecI
	RS00873	RSp0416	putative iron-regulated TonB-dependent siderophore transporter
Position: -48 Score: 5.2 Sequence: AATGAGAATCATTATCATC Locus tag: RS02198 Name: RSp1640 Funciton: putative transmembrane lipoprotein Locus tag: RS02199 Name: RSp1641 Funciton: hypothetical protein Locus tag: RS02200 Name: RSp1642 Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
	RS02198	RSp1640	putative transmembrane lipoprotein
	RS02199	RSp1641	hypothetical protein
	RS02200	RSp1642	Uncharacterized iron-regulated membrane protein, DUF337 family
Position: -66 Score: 4.9 Sequence: AATGAAAACGATTCGCATT Locus tag: RS03714 Name: RSp0252 Funciton: Ferrous iron transport protein A Locus tag: RSp0251 Name: feoB Funciton: Ferrous iron transport protein B Locus tag: RS03716 Name: RSp0250 Funciton: putative transmembrane protein involved in ferrous iron transport
	RS03714	RSp0252	Ferrous iron transport protein A
	RSp0251	feoB	Ferrous iron transport protein B
	RS03716	RSp0250	putative transmembrane protein involved in ferrous iron transport
Position: -287 Score: 5 Sequence: AATGGGAATCATTATCGTT Locus tag: RSc1963 Name: tonB Funciton: Component of outer membrane metal uptake system, TonB family Locus tag: RSc1964 Name: exbB1 Funciton: Component of outer membrane metal uptake system, ExbB family Locus tag: RSc1965 Name: exbD1 Funciton: Component of outer membrane metal uptake system, ExbD family
	RSc1963	tonB	Component of outer membrane metal uptake system, TonB family
	RSc1964	exbB1	Component of outer membrane metal uptake system, ExbB family
	RSc1965	exbD1	Component of outer membrane metal uptake system, ExbD family

Export
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Ralstonia solanacearum GMI1000

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --