Regulon of Fur in Ralstonia metallidurans CH34

Properties
Regulator type:	Transcription factor
TF locus tag:	Rmet_5746, Rmet_2976
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Ralstonia
Statistics of regulated genes:
- Genes	37
- Operons	18
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 94 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -317 Score: 4.7 Sequence: TATGATAATGGTTTGCATT Position: -99 Score: 4.8 Sequence: AATACTAATCATTTGCATT Locus tag: Rmet_1104 Name: null Funciton: TonB-dependent siderophore transporter
	Rmet_1104		TonB-dependent siderophore transporter
Position: -56 Score: 4.4 Sequence: AATTACAATCATTCGCATT Locus tag: pMOL30_093 Name: pbrT Funciton: iron permease FTR1
	pMOL30_093	pbrT	iron permease FTR1
Position: -66 Score: 5.1 Sequence: AATACGAATCGTTATCATT Locus tag: Rmet_5373 Name: null Funciton: TonB-dependent outer-membrane hemin transporter Locus tag: Rmet_5374 Name: null Funciton: hypothetical protein Locus tag: Rmet_5375 Name: hmuS Funciton: hemin transport protein HmuS; putative Hemin-degrading Locus tag: Rmet_5376 Name: hmuT Funciton: hemin-binding periplasmic protein HmuT Locus tag: Rmet_5377 Name: hmuU Funciton: hemin ABC-transport system permease Locus tag: Rmet_5378 Name: hmuV Funciton: hemin importer ATP-binding subunit
	Rmet_5373		TonB-dependent outer-membrane hemin transporter
	Rmet_5374		hypothetical protein
	Rmet_5375	hmuS	hemin transport protein HmuS; putative Hemin-degrading
	Rmet_5376	hmuT	hemin-binding periplasmic protein HmuT
	Rmet_5377	hmuU	hemin ABC-transport system permease
	Rmet_5378	hmuV	hemin importer ATP-binding subunit
Position: -54 Score: 4.6 Sequence: AATACGAATTGTTCGTATT Locus tag: Rmet_1819 Name: null Funciton: Putative TonB-dependent siderophore transporter
	Rmet_1819		Putative TonB-dependent siderophore transporter
Position: -167 Score: 4.8 Sequence: AATGCAAATGATTAGTATT Locus tag: Rmet_1105 Name: null Funciton: putative component of iron permease Locus tag: Rmet_1106 Name: null Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family Locus tag: Rmet_1107 Name: null Funciton: putative iron uptake protein Locus tag: Rmet_1108 Name: null Funciton: putative TonB-dependent siderophore transporter
	Rmet_1105		putative component of iron permease
	Rmet_1106		Uncharacterized iron-regulated membrane protein, DUF337 family
	Rmet_1107		putative iron uptake protein
	Rmet_1108		putative TonB-dependent siderophore transporter
Position: -78 Score: 5.3 Sequence: AATACGAATCATTATTATT Locus tag: Rmet_1367 Name: null Funciton: putative transmembrane lipoprotein
	Rmet_1367		putative transmembrane lipoprotein
Position: -62 Score: 4.2 Sequence: AAATAGAATTACAATCATT Position: -56 Score: 4.4 Sequence: AATTACAATCATTCGCATT Locus tag: Rmet_5945 Name: pbrT Funciton: iron permease FTR1
	Rmet_5945	pbrT	iron permease FTR1
Position: -66 Score: 4.7 Sequence: AATGCGAACCATTCGCATT Locus tag: Rmet_5806 Name: fecA1 Funciton: TonB-dependent outer membrane transporter for Fe(III)-dicitrate
	Rmet_5806	fecA1	TonB-dependent outer membrane transporter for Fe(III)-dicitrate
Position: -107 Score: 4.6 Sequence: ATTGCAAATCATTCCTATT Locus tag: Rmet_5807 Name: fecA2 Funciton: TonB-dependent outer membrane transporter for Fe(III)-dicitrate
	Rmet_5807	fecA2	TonB-dependent outer membrane transporter for Fe(III)-dicitrate
Position: -302 Score: 4.7 Sequence: AATGCGAATAATTTACATT Locus tag: Rmet_0837 Name: null Funciton: TonB-dependent siderophore receptor Locus tag: Rmet_0838 Name: null Funciton: 2OG-Fe(II) oxygenase Locus tag: Rmet_0839 Name: null Funciton: FMN-dependent alpha-hydroxy acid dehydrogenase
	Rmet_0837		TonB-dependent siderophore receptor
	Rmet_0838		2OG-Fe(II) oxygenase
	Rmet_0839		FMN-dependent alpha-hydroxy acid dehydrogenase
Position: -42 Score: 4.2 Sequence: AACGCGAATCGTTCGCATT Locus tag: Rmet_3077 Name: null Funciton: putative TonB-dependent siderophore transporter Locus tag: Rmet_3078 Name: null Funciton: 2OG-Fe(II) oxygenase
	Rmet_3077		putative TonB-dependent siderophore transporter
	Rmet_3078		2OG-Fe(II) oxygenase
Position: -91 Score: 5.2 Sequence: AATGGGAATTGTTATCATT Locus tag: Rmet_0247 Name: null Funciton: Bacterioferritin-associated ferredoxin Locus tag: Rmet_0248 Name: null Funciton: Bacterioferritin
	Rmet_0247		Bacterioferritin-associated ferredoxin
	Rmet_0248		Bacterioferritin
Position: -56 Score: 4.6 Sequence: AATGATAATAGGTCGCATT Locus tag: Rmet_1120 Name: null Funciton: Probable RNA polymerase sigma factor FecI Locus tag: Rmet_1119 Name: null Funciton: putative regulator of siderophore uptake FecR Locus tag: Rmet_1118 Name: null Funciton: putative iron-regulated TonB-dependent siderophore transporter
	Rmet_1120		Probable RNA polymerase sigma factor FecI
	Rmet_1119		putative regulator of siderophore uptake FecR
	Rmet_1118		putative iron-regulated TonB-dependent siderophore transporter
Position: -347 Score: 5.3 Sequence: AATACGAATCATTATTATT Locus tag: Rmet_1366 Name: null Funciton: putative transmembrane lipoprotein Locus tag: Rmet_1365 Name: null Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
	Rmet_1366		putative transmembrane lipoprotein
	Rmet_1365		Uncharacterized iron-regulated membrane protein, DUF337 family
Position: -73 Score: 5.6 Sequence: AATGATAACAATTCTCATT Locus tag: Rmet_2280 Name: null Funciton: hemin uptake protein
	Rmet_2280		hemin uptake protein
Position: -120 Score: 5 Sequence: ATTGATACTCATTATCATT Locus tag: Rmet_0720 Name: null Funciton: putative exported protein
	Rmet_0720		putative exported protein
Position: -208 Score: 5.3 Sequence: AATAAGAATCATTATCGTT Locus tag: Rmet_2277 Name: null Funciton: Component of outer membrane metal uptake system, TonB family Locus tag: Rmet_2278 Name: null Funciton: Component of outer membrane metal uptake system, ExbB family Locus tag: Rmet_2279 Name: null Funciton: Component of outer membrane metal uptake system, ExbD family
	Rmet_2277		Component of outer membrane metal uptake system, TonB family
	Rmet_2278		Component of outer membrane metal uptake system, ExbB family
	Rmet_2279		Component of outer membrane metal uptake system, ExbD family
Position: -82 Score: 4.2 Sequence: ATCGAGAACGATTTCTATT Locus tag: Rmet_5891 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: Rmet_5890 Name: feoB Funciton: Ferrous iron transport protein B Locus tag: Rmet_5889 Name: null Funciton: putative transmembrane protein involved in ferrous iron transport
	Rmet_5891	feoA	Ferrous iron transport protein A
	Rmet_5890	feoB	Ferrous iron transport protein B
	Rmet_5889		putative transmembrane protein involved in ferrous iron transport

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Ralstonia metallidurans CH34

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --