Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Ralstonia metallidurans CH34

Properties
Regulator type: Transcription factor
TF locus tag: Rmet_5746, Rmet_2976
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Ralstonia
Statistics of regulated genes:
- Genes 37
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 94 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -317
Score: 4.7
Sequence: TATGATAATGGTTTGCATT
Position: -99
Score: 4.8
Sequence: AATACTAATCATTTGCATT
Locus tag: Rmet_1104
Name: null
Funciton: TonB-dependent siderophore transporter
Rmet_1104
TonB-dependent siderophore transporter
Position: -56
Score: 4.4
Sequence: AATTACAATCATTCGCATT
Locus tag: pMOL30_093
Name: pbrT
Funciton: iron permease FTR1
pMOL30_093
pbrT
iron permease FTR1
Position: -66
Score: 5.1
Sequence: AATACGAATCGTTATCATT
Locus tag: Rmet_5373
Name: null
Funciton: TonB-dependent outer-membrane hemin transporter
Locus tag: Rmet_5374
Name: null
Funciton: hypothetical protein
Locus tag: Rmet_5375
Name: hmuS
Funciton: hemin transport protein HmuS; putative Hemin-degrading
Locus tag: Rmet_5376
Name: hmuT
Funciton: hemin-binding periplasmic protein HmuT
Locus tag: Rmet_5377
Name: hmuU
Funciton: hemin ABC-transport system permease
Locus tag: Rmet_5378
Name: hmuV
Funciton: hemin importer ATP-binding subunit
Rmet_5373
TonB-dependent outer-membrane hemin transporter
Rmet_5374
hypothetical protein
Rmet_5375
hmuS
hemin transport protein HmuS; putative Hemin-degrading
Rmet_5376
hmuT
hemin-binding periplasmic protein HmuT
Rmet_5377
hmuU
hemin ABC-transport system permease
Rmet_5378
hmuV
hemin importer ATP-binding subunit
Position: -54
Score: 4.6
Sequence: AATACGAATTGTTCGTATT
Locus tag: Rmet_1819
Name: null
Funciton: Putative TonB-dependent siderophore transporter
Rmet_1819
Putative TonB-dependent siderophore transporter
Position: -167
Score: 4.8
Sequence: AATGCAAATGATTAGTATT
Locus tag: Rmet_1105
Name: null
Funciton: putative component of iron permease
Locus tag: Rmet_1106
Name: null
Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
Locus tag: Rmet_1107
Name: null
Funciton: putative iron uptake protein
Locus tag: Rmet_1108
Name: null
Funciton: putative TonB-dependent siderophore transporter
Rmet_1105
putative component of iron permease
Rmet_1106
Uncharacterized iron-regulated membrane protein, DUF337 family
Rmet_1107
putative iron uptake protein
Rmet_1108
putative TonB-dependent siderophore transporter
Position: -78
Score: 5.3
Sequence: AATACGAATCATTATTATT
Locus tag: Rmet_1367
Name: null
Funciton: putative transmembrane lipoprotein
Rmet_1367
putative transmembrane lipoprotein
Position: -62
Score: 4.2
Sequence: AAATAGAATTACAATCATT
Position: -56
Score: 4.4
Sequence: AATTACAATCATTCGCATT
Locus tag: Rmet_5945
Name: pbrT
Funciton: iron permease FTR1
Rmet_5945
pbrT
iron permease FTR1
Position: -66
Score: 4.7
Sequence: AATGCGAACCATTCGCATT
Locus tag: Rmet_5806
Name: fecA1
Funciton: TonB-dependent outer membrane transporter for Fe(III)-dicitrate
Rmet_5806
fecA1
TonB-dependent outer membrane transporter for Fe(III)-dicitrate
Position: -107
Score: 4.6
Sequence: ATTGCAAATCATTCCTATT
Locus tag: Rmet_5807
Name: fecA2
Funciton: TonB-dependent outer membrane transporter for Fe(III)-dicitrate
Rmet_5807
fecA2
TonB-dependent outer membrane transporter for Fe(III)-dicitrate
Position: -302
Score: 4.7
Sequence: AATGCGAATAATTTACATT
Locus tag: Rmet_0837
Name: null
Funciton: TonB-dependent siderophore receptor
Locus tag: Rmet_0838
Name: null
Funciton: 2OG-Fe(II) oxygenase
Locus tag: Rmet_0839
Name: null
Funciton: FMN-dependent alpha-hydroxy acid dehydrogenase
Rmet_0837
TonB-dependent siderophore receptor
Rmet_0838
2OG-Fe(II) oxygenase
Rmet_0839
FMN-dependent alpha-hydroxy acid dehydrogenase
Position: -42
Score: 4.2
Sequence: AACGCGAATCGTTCGCATT
Locus tag: Rmet_3077
Name: null
Funciton: putative TonB-dependent siderophore transporter
Locus tag: Rmet_3078
Name: null
Funciton: 2OG-Fe(II) oxygenase
Rmet_3077
putative TonB-dependent siderophore transporter
Rmet_3078
2OG-Fe(II) oxygenase
Position: -91
Score: 5.2
Sequence: AATGGGAATTGTTATCATT
Locus tag: Rmet_0247
Name: null
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: Rmet_0248
Name: null
Funciton: Bacterioferritin
Rmet_0247
Bacterioferritin-associated ferredoxin
Rmet_0248
Bacterioferritin
Position: -56
Score: 4.6
Sequence: AATGATAATAGGTCGCATT
Locus tag: Rmet_1120
Name: null
Funciton: Probable RNA polymerase sigma factor FecI
Locus tag: Rmet_1119
Name: null
Funciton: putative regulator of siderophore uptake FecR
Locus tag: Rmet_1118
Name: null
Funciton: putative iron-regulated TonB-dependent siderophore transporter
Rmet_1120
Probable RNA polymerase sigma factor FecI
Rmet_1119
putative regulator of siderophore uptake FecR
Rmet_1118
putative iron-regulated TonB-dependent siderophore transporter
Position: -347
Score: 5.3
Sequence: AATACGAATCATTATTATT
Locus tag: Rmet_1366
Name: null
Funciton: putative transmembrane lipoprotein
Locus tag: Rmet_1365
Name: null
Funciton: Uncharacterized iron-regulated membrane protein, DUF337 family
Rmet_1366
putative transmembrane lipoprotein
Rmet_1365
Uncharacterized iron-regulated membrane protein, DUF337 family
Position: -73
Score: 5.6
Sequence: AATGATAACAATTCTCATT
Locus tag: Rmet_2280
Name: null
Funciton: hemin uptake protein
Rmet_2280
hemin uptake protein
Position: -120
Score: 5
Sequence: ATTGATACTCATTATCATT
Locus tag: Rmet_0720
Name: null
Funciton: putative exported protein
Rmet_0720
putative exported protein
Position: -208
Score: 5.3
Sequence: AATAAGAATCATTATCGTT
Locus tag: Rmet_2277
Name: null
Funciton: Component of outer membrane metal uptake system, TonB family
Locus tag: Rmet_2278
Name: null
Funciton: Component of outer membrane metal uptake system, ExbB family
Locus tag: Rmet_2279
Name: null
Funciton: Component of outer membrane metal uptake system, ExbD family
Rmet_2277
Component of outer membrane metal uptake system, TonB family
Rmet_2278
Component of outer membrane metal uptake system, ExbB family
Rmet_2279
Component of outer membrane metal uptake system, ExbD family
Position: -82
Score: 4.2
Sequence: ATCGAGAACGATTTCTATT
Locus tag: Rmet_5891
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: Rmet_5890
Name: feoB
Funciton: Ferrous iron transport protein B
Locus tag: Rmet_5889
Name: null
Funciton: putative transmembrane protein involved in ferrous iron transport
Rmet_5891
feoA
Ferrous iron transport protein A
Rmet_5890
feoB
Ferrous iron transport protein B
Rmet_5889
putative transmembrane protein involved in ferrous iron transport
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