Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of IscR regulog to Ralstonia metallidurans CH34

Reference regulog properties
Source regulog: IscR - Ralstonia
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia metallidurans CH34
Orthologous TF(s) Rmet_1024
Regulated genes 1
Built upon 12 sites [see more]
Predicted regulatory interactions in Ralstonia metallidurans CH34
Locus tag Position Score Sequence
Position: -40
Score: 6.2
Sequence: ATACTCGACCGAAATCCTCAAGTAT
Locus tag: Rmet_1024
Rmet_1024 -40 6.2 ATACTCGACCGAAATCCTCAAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iscR
Ortholog function: Iron-sulfur cluster regulator IscR
Ralstonia solanacearum GMI1000 RS04257 -65 6.3 TTAGTTGACTGATTTTGTCGGGTTC
-36 6.5 ATACTTGAGCAAAACGATCAGGTAT
Ralstonia pickettii 12J Rpic_0883 -66 6.3 TTAGTTGACCGATTTTGTCGGGTTC
-37 6.5 ATACTTGAGCAAAACGATCAGGTAT
Ralstonia metallidurans CH34 Rmet_1024 -69 5.9 GTACTTGACTGATTTAGTCGGAAAA
-40 6.2 ATACTCGACCGAAATCCTCAAGTAT
Ralstonia eutropha JMP134 Reut_A1057 -66 6.9 GTAGTTGACTGAAATAGTCGGGTAC
-37 6.8 ATACTTGACGGAAACGATCAAGTAT
Ralstonia eutropha H16 H16_A1157 -80 6.9 GTAGTTGACTGAATTAGTCGGGTAC
-51 6.8 ATACTTGACGGAAACGATCAAGTAT
Cupriavidus taiwanensis RALTA_A1138 -92 6.9 GTAGTTGACTGAATTAGTCGGGTAC
-63 6.8 ATACTTGACGGAAACGATCAAGTAT