Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PhnF regulog to Ralstonia metallidurans CH34

Reference regulog properties
Source regulog: PhnF - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia metallidurans CH34
Orthologous TF(s) Rmet_0767
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Ralstonia metallidurans CH34
Locus tag Position Score Sequence
Position: -29
Score: 7
Sequence: TCTAAACGTATAGACGTATAGG
Locus tag: Rmet_0766
Rmet_0766 -29 7 TCTAAACGTATAGACGTATAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnG
Ortholog function: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Ralstonia metallidurans CH34 Rmet_0766 -29 7 TCTAAACGTATAGACGTATAGG
Ralstonia eutropha JMP134 Reut_B4186 -29 6.7 TCTACACGTATAGACGTATAGG
Ralstonia eutropha H16 H16_B1288 -26 7 TCTAAACGTATAGACGTATAGG
Cupriavidus taiwanensis RALTA_B1191 -23 7 TCTAAACGTATAGACGTATAGG
Position: -155
Score: 7
Sequence: CCTATACGTCTATACGTTTAGA
Locus tag: Rmet_0767
Rmet_0767 -155 7 CCTATACGTCTATACGTTTAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnF
Ortholog function: Transcriptional regulator for phosphonate utilization, GntR family
Ralstonia metallidurans CH34 Rmet_0767 -155 7 CCTATACGTCTATACGTTTAGA
Ralstonia eutropha JMP134 Reut_B4185 -243 6.7 CCTATACGTCTATACGTGTAGA
Ralstonia eutropha H16 H16_B1289 -174 7 CCTATACGTCTATACGTTTAGA
Cupriavidus taiwanensis RALTA_B1192 -174 7 CCTATACGTCTATACGTTTAGA
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