Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Dnr regulog to Ralstonia metallidurans CH34

Reference regulog properties
Source regulog: Dnr - Ralstonia
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Propagated regulon:
Target genome Ralstonia metallidurans CH34
Orthologous TF(s) Rmet_4521
Regulated genes 2
Built upon 9 sites [see more]
Predicted regulatory interactions in Ralstonia metallidurans CH34
Locus tag Position Score Sequence
Position: -118
Score: 5.6
Sequence: CGTTGACTCGTGTCAATC
Locus tag: Rmet_3172
Rmet_3172 -118 5.6 CGTTGACTCGTGTCAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirS
Ortholog function: Nitrite reductase NirS (Cytochrome cd1)
Ralstonia metallidurans CH34 Rmet_3172 -118 5.6 CGTTGACTCGTGTCAATC
Ralstonia eutropha JMP134 Reut_B5010 -91 5.2 CGTTGACAACAGTCAACC
Ralstonia eutropha H16 H16_B2277 -123 4.6 GTTTGATGCCAGTCAATT
Cupriavidus taiwanensis RALTA_B2049 -123 4.5 GTTTGATGACAGTCAATC
Position: -166
Score: 5
Sequence: CGTTGACACCGGTCAACC
Locus tag: Rmet_4937
Rmet_4937 -166 5 CGTTGACACCGGTCAACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirD
Ortholog function: heme d1 biosynthesis protein (NirD)
Ralstonia eutropha H16 H16_B2280 -123 4.6 GTTTGATGCCAGTCAATT
Cupriavidus taiwanensis RALTA_B2052 -123 4.5 GTTTGATGACAGTCAATC
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