Regulons of Nocardia farcinica IFM 10152
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AcnR |
Citrate |
Tricarboxylic acid cycle |
2 |
2 |
| TF |
AmtR |
GlnK-AMP, signal transduction protein |
Nitrogen metabolism |
2 |
2 |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
2 |
2 |
| TF |
ArsR |
Arsenite; Arsenate |
Arsenic resistance |
2 |
2 |
| TF |
BioQ |
Biotin |
Biotin biosynthesis |
4 |
4 |
| TF |
BioQ |
Biotin |
Biotin biosynthesis |
4 |
4 |
| TF |
CsoR |
Copper ion, (Cu+) |
Copper resistance |
2 |
2 |
| TF |
DosR |
Oxygen; Carbon monoxide; Nitric oxide |
Dormancy |
18 |
10 |
| TF |
HrcA |
Heat shock |
Heat shock response |
4 |
5 |
| TF |
HutC |
cis-Urocanic acid |
Histidine utilization |
5 |
5 |
| TF |
LexA |
DNA damage |
SOS response |
9 |
7 |
| TF |
LtbR |
|
Leucine biosynthesis |
2 |
2 |
| TF |
Mce2R |
|
Fatty acid metabolism |
2 |
3 |
| TF |
MntR |
Manganese ion, (Mn2+) |
Manganese homeostasis |
1 |
1 |
| TF |
Nfa20840 |
|
|
1 |
1 |
| TF |
Nfa21130 |
|
Metabolite transport |
1 |
1 |
| TF |
Nfa3720 |
|
Multidrug resistance; Multidrug efflux |
1 |
1 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
4 |
| TF |
PaaR |
Phenylacetyl-CoA |
Phenylacetic acid degradation |
4 |
3 |
| TF |
PaaR |
Phenylacetyl-CoA |
Phenylacetic acid degradation |
4 |
4 |
| TF |
PdxQ3 |
|
Pyridoxine/pyridoxal homeostasis |
2 |
1 |
| TF |
PdxR2 |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis |
1 |
1 |
| TF |
PdxR3 |
|
Pyridoxine/pyridoxal homeostasis |
2 |
2 |
| TF |
PhnF |
|
Phosphonate utilization; 2-aminoethylphosphonate utilization |
3 |
6 |
| TF |
Rex |
NADH |
Energy metabolism |
10 |
2 |
| TF |
Rex |
NADH |
Energy metabolism |
7 |
2 |
| TF |
RhaR |
Rhamnose |
Rhamnose utilization |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
6 |
7 |
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