Regulons of Nocardia farcinica IFM 10152

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AcnR	Citrate	Tricarboxylic acid cycle	2	2
TF	AmtR	GlnK-AMP, signal transduction protein	Nitrogen metabolism	2	2
TF	ArgR	Arginine	Arginine biosynthesis	2	2
TF	ArsR	Arsenite; Arsenate	Arsenic resistance	2	2
TF	BioQ	Biotin	Biotin biosynthesis	4	4
TF	BioQ	Biotin	Biotin biosynthesis	4	4
TF	CsoR	Copper ion, (Cu+)	Copper resistance	2	2
TF	DosR	Oxygen; Carbon monoxide; Nitric oxide	Dormancy	18	10
TF	HrcA	Heat shock	Heat shock response	4	5
TF	HutC	cis-Urocanic acid	Histidine utilization	5	5
TF	LexA	DNA damage	SOS response	9	7
TF	LtbR		Leucine biosynthesis	2	2
TF	Mce2R		Fatty acid metabolism	2	3
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	1	1
TF	Nfa20840			1	1
TF	Nfa21130		Metabolite transport	1	1
TF	Nfa3720		Multidrug resistance; Multidrug efflux	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	4
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	4	3
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	4	4
TF	PdxQ3		Pyridoxine/pyridoxal homeostasis	2	1
TF	PdxR2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxR3		Pyridoxine/pyridoxal homeostasis	2	2
TF	PhnF		Phosphonate utilization; 2-aminoethylphosphonate utilization	3	6
TF	Rex	NADH	Energy metabolism	10	2
TF	Rex	NADH	Energy metabolism	7	2
TF	RhaR	Rhamnose	Rhamnose utilization	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	6	7

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --