Regulon of HutC in Nocardia farcinica IFM 10152

Properties
Regulator type:	Transcription factor
TF locus tag:	nfa12250
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Histidine utilization
Effector:	cis-Urocanic acid
Regulog:	HutC - Nocardiaceae
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Nocardiaceae
By TF family - GntR/Others
By effector - cis-Urocanic acid
By pathway - Histidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -175 Score: 6.2 Sequence: AAGCCTGTCTATACAGGAAT Locus tag: nfa12300 Name: fadE15 Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2) Locus tag: nfa12310 Name: nfa12310 Funciton: CAIB/BAIF family protein Locus tag: nfa12320 Name: nfa12320 Funciton: Transcriptional regulator, IclR family
	nfa12300	fadE15	Butyryl-CoA dehydrogenase (EC 1.3.99.2)
	nfa12310	nfa12310	CAIB/BAIF family protein
	nfa12320	nfa12320	Transcriptional regulator, IclR family
Position: -99 Score: 5.9 Sequence: CAGCCTGTCTATACAGGCAT Locus tag: nfa12330 Name: COG1457 Funciton: Predicted histidine transporter, Purine-cytosine permease family Locus tag: nfa12340 Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7) Locus tag: nfa12350 Name: hutG Funciton: Formiminoglutamase (EC 3.5.3.8)
	nfa12330	COG1457	Predicted histidine transporter, Purine-cytosine permease family
	nfa12340	hutI	Imidazolonepropionase (EC 3.5.2.7)
	nfa12350	hutG	Formiminoglutamase (EC 3.5.3.8)
Position: -81 Score: 5.9 Sequence: TTGCTTGTATATACAGGACT Locus tag: nfa12270 Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
	nfa12270	hutU	Urocanate hydratase (EC 4.2.1.49)
Position: -131 Score: 5.9 Sequence: AGTCCTGTATATACAAGCAA Locus tag: nfa12260 Name: gdh Funciton: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form Locus tag: nfa12250 Name: hutC Funciton: Histidine utilization repressor, GntR family
	nfa12260	gdh	NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
	nfa12250	hutC	Histidine utilization repressor, GntR family
Position: -107 Score: 6.2 Sequence: ATTCCTGTATAGACAGGCTT Locus tag: nfa12290 Name: COG1113 Funciton: Predicted histidine transporter, Gamma-aminobutyrate permease family Locus tag: nfa12280 Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
	nfa12290	COG1113	Predicted histidine transporter, Gamma-aminobutyrate permease family
	nfa12280	hutH	Histidine ammonia-lyase (EC 4.3.1.3)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD