Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HutC in Nocardia farcinica IFM 10152

Properties
Regulator type: Transcription factor
TF locus tag: nfa12250
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Regulog: HutC - Nocardiaceae
Statistics of regulated genes:
- Genes 11
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 12 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -175
Score: 6.2
Sequence: AAGCCTGTCTATACAGGAAT
Locus tag: nfa12300
Name: fadE15
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: nfa12310
Name: nfa12310
Funciton: CAIB/BAIF family protein
Locus tag: nfa12320
Name: nfa12320
Funciton: Transcriptional regulator, IclR family
fadE15
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
nfa12310
CAIB/BAIF family protein
nfa12320
Transcriptional regulator, IclR family

Position: -99
Score: 5.9
Sequence: CAGCCTGTCTATACAGGCAT
Locus tag: nfa12330
Name: COG1457
Funciton: Predicted histidine transporter, Purine-cytosine permease family
Locus tag: nfa12340
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: nfa12350
Name: hutG
Funciton: Formiminoglutamase (EC 3.5.3.8)
COG1457
Predicted histidine transporter, Purine-cytosine permease family
hutI
Imidazolonepropionase (EC 3.5.2.7)
hutG
Formiminoglutamase (EC 3.5.3.8)

Position: -81
Score: 5.9
Sequence: TTGCTTGTATATACAGGACT
Locus tag: nfa12270
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
hutU
Urocanate hydratase (EC 4.2.1.49)

Position: -131
Score: 5.9
Sequence: AGTCCTGTATATACAAGCAA
Locus tag: nfa12260
Name: gdh
Funciton: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
Locus tag: nfa12250
Name: hutC
Funciton: Histidine utilization repressor, GntR family
gdh
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
hutC
Histidine utilization repressor, GntR family

Position: -107
Score: 6.2
Sequence: ATTCCTGTATAGACAGGCTT
Locus tag: nfa12290
Name: COG1113
Funciton: Predicted histidine transporter, Gamma-aminobutyrate permease family
Locus tag: nfa12280
Name: hutH
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
COG1113
Predicted histidine transporter, Gamma-aminobutyrate permease family
hutH
Histidine ammonia-lyase (EC 4.3.1.3)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD