Statistics of regulated genes

Genome	Genes	Operons
Nocardia farcinica IFM 10152	11	5
Rhodococcus erythropolis PR4	9	3
Rhodococcus opacus B4	6	2
Rhodococcus sp. RHA1	6	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes					Function
CRON 1.
fadE15	* Nocardia farcinica IFM 10152 Site: position = -175 score = 6.17151 sequence = AAGCCTGTCTATACAGGAAT Gene: nfa12300: Butyryl-CoA dehydrogenase (EC 1.3.99.2)	* Rhodococcus erythropolis PR4 Site: position = -174 score = 5.19119 sequence = CAACTTGTCTATACAGGTTT Gene: RER_51260: Butyryl-CoA dehydrogenase (EC 1.3.99.2)	Rhodococcus opacus B4 Gene: ROP_47330: Butyryl-CoA dehydrogenase (EC 1.3.99.2)	Rhodococcus sp. RHA1 Gene: RHA1_ro04636: Butyryl-CoA dehydrogenase (EC 1.3.99.2)	Butyryl-CoA dehydrogenase (EC 1.3.99.2)
nfa12310	Nocardia farcinica IFM 10152 Gene: nfa12310: CAIB/BAIF family protein	Rhodococcus erythropolis PR4 Gene: RER_51270: CAIB/BAIF family protein	Rhodococcus opacus B4 Gene: ROP_47320: CAIB/BAIF family protein	Rhodococcus sp. RHA1 Gene: RHA1_ro04635: CAIB/BAIF family protein	CAIB/BAIF family protein
nfa12320	Nocardia farcinica IFM 10152 Gene: nfa12320: Transcriptional regulator, IclR family	Rhodococcus erythropolis PR4 Gene: RER_51280: Transcriptional regulator, IclR family	Rhodococcus opacus B4 Gene: ROP_47310: Transcriptional regulator, IclR family	Rhodococcus sp. RHA1 Gene: RHA1_ro04634: Transcriptional regulator, IclR family	Transcriptional regulator, IclR family
CRON 2.
gdh	* Nocardia farcinica IFM 10152 Site: position = -131 score = 5.87909 sequence = AGTCCTGTATATACAAGCAA Gene: nfa12260: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	* Rhodococcus erythropolis PR4 Site: position = 67 score = 5.19119 sequence = AAACCTGTATAGACAAGTTG Gene: RER_51250: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	* Rhodococcus opacus B4 Site: position = -90 score = 4.69454 sequence = AGTCCTGTATAGACAACCCC Gene: ROP_47410: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	* Rhodococcus sp. RHA1 Site: position = -90 score = 4.69454 sequence = AGTCCTGTATAGACAACCCC Gene: RHA1_ro04644: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form	NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
hutC	Nocardia farcinica IFM 10152 Gene: nfa12250: Histidine utilization repressor, GntR family	Rhodococcus erythropolis PR4 Gene: RER_51240: Histidine utilization repressor, GntR family	Rhodococcus opacus B4 Gene: ROP_47420: Histidine utilization repressor, GntR family	Rhodococcus sp. RHA1 Gene: RHA1_ro04645: Histidine utilization repressor, GntR family	Histidine utilization repressor, GntR family
CRON 3.
COG1457	* Nocardia farcinica IFM 10152 Site: position = -99 score = 5.89491 sequence = CAGCCTGTCTATACAGGCAT Gene: nfa12330: Predicted histidine transporter, Purine-cytosine permease family	* Rhodococcus erythropolis PR4 Site: position = -151 score = 6.06761 sequence = ACGCCTGTATATACAGGCAT Gene: RER_51330: Predicted histidine transporter, Purine-cytosine permease family	* Rhodococcus opacus B4 Site: position = -134 score = 4.69454 sequence = GGGGTTGTCTATACAGGACT Gene: ROP_47400: Predicted histidine transporter, Purine-cytosine permease family	* Rhodococcus sp. RHA1 Site: position = -136 score = 4.69454 sequence = GGGGTTGTCTATACAGGACT Gene: RHA1_ro04643: Predicted histidine transporter, Purine-cytosine permease family	Predicted histidine transporter, Purine-cytosine permease family
hutU	* Nocardia farcinica IFM 10152 Site: position = -81 score = 5.87909 sequence = TTGCTTGTATATACAGGACT Gene: nfa12270: Urocanate hydratase (EC 4.2.1.49)	Rhodococcus erythropolis PR4 Gene: RER_51340: Urocanate hydratase (EC 4.2.1.49)	Rhodococcus opacus B4 Gene: ROP_47390: Urocanate hydratase (EC 4.2.1.49)	Rhodococcus sp. RHA1 Gene: RHA1_ro04642: Urocanate hydratase (EC 4.2.1.49)	Urocanate hydratase (EC 4.2.1.49)
hutI	Nocardia farcinica IFM 10152 Gene: nfa12340: Imidazolonepropionase (EC 3.5.2.7)	Rhodococcus erythropolis PR4 Gene: RER_51350: Imidazolonepropionase (EC 3.5.2.7)	Rhodococcus opacus B4 Gene: ROP_47380: Imidazolonepropionase (EC 3.5.2.7)	Rhodococcus sp. RHA1 Gene: RHA1_ro04641: Imidazolonepropionase (EC 3.5.2.7)	Imidazolonepropionase (EC 3.5.2.7)
hutG	Nocardia farcinica IFM 10152 Gene: nfa12350: Formiminoglutamase (EC 3.5.3.8)	Rhodococcus erythropolis PR4 Gene: RER_51360: Formiminoglutamase (EC 3.5.3.8)	Rhodococcus opacus B4 Gene: ROP_47370: Formiminoglutamase (EC 3.5.3.8)	Rhodococcus sp. RHA1 Gene: RHA1_ro04640: Formiminoglutamase (EC 3.5.3.8)	Formiminoglutamase (EC 3.5.3.8)
CRON 4.
COG1113	* Nocardia farcinica IFM 10152 Site: position = -107 score = 6.17151 sequence = ATTCCTGTATAGACAGGCTT Gene: nfa12290: Predicted histidine transporter, Gamma-aminobutyrate permease family	Rhodococcus erythropolis PR4 Gene: RER_15210: Predicted histidine transporter, Gamma-aminobutyrate permease family	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Predicted histidine transporter, Gamma-aminobutyrate permease family
hutH	Nocardia farcinica IFM 10152 Gene: nfa12280: Histidine ammonia-lyase (EC 4.3.1.3)	Rhodococcus erythropolis PR4 Gene: RER_51300: Histidine ammonia-lyase (EC 4.3.1.3)	Rhodococcus opacus B4 Gene: ROP_18710: Histidine ammonia-lyase (EC 4.3.1.3)	Rhodococcus sp. RHA1 Gene: RHA1_ro02154: Histidine ammonia-lyase (EC 4.3.1.3)	Histidine ammonia-lyase (EC 4.3.1.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD